BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002045
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238374.1| 60S acidic ribosomal protein P0 [Glycine max...   444   e-122
ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycin...   442   e-122
ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago tr...   439   e-121
dbj|BAE71263.1| putative 60S acidic ribosomal protein P0 [Trifol...   439   e-121
ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [...   439   e-120

>ref|NP_001238374.1| 60S acidic ribosomal protein P0 [Glycine max]
            gi|1710587|sp|P50346.1|RLA0_SOYBN RecName: Full=60S
            acidic ribosomal protein P0 gi|1196897|gb|AAB63814.1|
            acidic ribosomal protein P0 [Glycine max]
          Length = 320

 Score =  444 bits (1143), Expect = e-122
 Identities = 224/247 (90%), Positives = 242/247 (97%)
 Frame = -1

Query: 1312 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 1133
            MAPKQTKAEKKIAYD KLC+L++E+ QILVV +DNVGSNQLQNIR+GLRGDSVVLMGKNT
Sbjct: 1    MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 1132 MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 953
            MMKR+VR+H+EKTGN A+LNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 952  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 773
            PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+K DKVGSSEAALLAK
Sbjct: 121  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 772  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 593
            LGIRPFSYGLVVL+VYDNGSVF+PEVLDLTEDDL+G+FAAGVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 592  PHMFINA 572
            PHMF+NA
Sbjct: 241  PHMFVNA 247


>ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycine max]
            gi|255641162|gb|ACU20858.1| unknown [Glycine max]
          Length = 319

 Score =  442 bits (1138), Expect = e-122
 Identities = 224/247 (90%), Positives = 241/247 (97%)
 Frame = -1

Query: 1312 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 1133
            MAPKQTKAEKKIAYD KLC+L++E+ QILVV +DNVGSNQLQNIR+GLRGDSVVLMGKNT
Sbjct: 1    MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 1132 MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 953
            MMKR+VR+H+EKTGN A+LNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 952  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 773
            PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAK
Sbjct: 121  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 772  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 593
            LGIRPFSYGLVVL+VYDNGSVF+PEVLDLTEDDL+ +FAAGVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 592  PHMFINA 572
            PHMF+NA
Sbjct: 241  PHMFVNA 247


>ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
            gi|355517930|gb|AES99553.1| 60S acidic ribosomal protein
            p0 [Medicago truncatula]
          Length = 323

 Score =  439 bits (1130), Expect = e-121
 Identities = 225/247 (91%), Positives = 236/247 (95%)
 Frame = -1

Query: 1312 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 1133
            MAPK TKAEKK AYD KLC+LLDEF QIL+V ADNVGS QLQNIR GLRGDSVVLMGKNT
Sbjct: 1    MAPKPTKAEKKQAYDVKLCQLLDEFTQILIVNADNVGSKQLQNIRGGLRGDSVVLMGKNT 60

Query: 1132 MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 953
            MMKR+VR+H+EKTGN AFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSVRMHAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 952  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 773
            PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAK
Sbjct: 121  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 772  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 593
            LGIRPFSYGLVVL+VYDNGSVFNPEVLDLTEDDL+ +FA GVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFNPEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAA 240

Query: 592  PHMFINA 572
            PHMF+NA
Sbjct: 241  PHMFVNA 247


>dbj|BAE71263.1| putative 60S acidic ribosomal protein P0 [Trifolium pratense]
            gi|84468386|dbj|BAE71276.1| putative 60S acidic ribosomal
            protein P0 [Trifolium pratense]
          Length = 321

 Score =  439 bits (1129), Expect = e-121
 Identities = 224/247 (90%), Positives = 237/247 (95%)
 Frame = -1

Query: 1312 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 1133
            MAPK TKAEKK  YD KLC+LLDEFNQILVV ADNVGSNQLQ+IRRGLRGDSVVLMGKNT
Sbjct: 1    MAPKATKAEKKQNYDSKLCQLLDEFNQILVVNADNVGSNQLQSIRRGLRGDSVVLMGKNT 60

Query: 1132 MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 953
            MMKR+VR+H+EKTGN AFLNL+PLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSVRMHAEKTGNNAFLNLVPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 952  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 773
            PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAK
Sbjct: 121  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 772  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 593
            L IRPFSYGLVVL+VYDNGSVF+PEVLDLTEDDL+ +FA GVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LAIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAA 240

Query: 592  PHMFINA 572
            PHMF+NA
Sbjct: 241  PHMFVNA 247


>ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  439 bits (1128), Expect = e-120
 Identities = 222/247 (89%), Positives = 240/247 (97%)
 Frame = -1

Query: 1312 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 1133
            MA K +KA+KKIAYD KLC+LLDE++QIL+ AADNVGSNQLQNIR+GLRGDSVVLMGKNT
Sbjct: 1    MAVKPSKADKKIAYDQKLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 1132 MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 953
            MMKR++RLH+EKTGN AFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSIRLHAEKTGNTAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 952  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 773
            PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAK
Sbjct: 121  PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 772  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 593
            LGIRPFSYGLVVL+VYDNGSVF+PEVLDLTE+DL+ +FAAGVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 592  PHMFINA 572
            PHMFINA
Sbjct: 241  PHMFINA 247