BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002044
         (1635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1...   295   2e-77
ref|XP_004143917.1| PREDICTED: ribosomal L1 domain-containing pr...   295   2e-77
gb|AFK37631.1| unknown [Medicago truncatula]                          293   7e-77
ref|XP_003595972.1| Ribosomal L1 domain-containing protein [Medi...   293   7e-77
ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing pr...   293   1e-76

>ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1 domain-containing
           protein 1-like [Cucumis sativus]
          Length = 364

 Score =  295 bits (756), Expect = 2e-77
 Identities = 157/308 (50%), Positives = 202/308 (65%), Gaps = 4/308 (1%)
 Frame = +2

Query: 26  MALED--PSSNLNPTTIGKAVDALVKYNKSQTKNKKAQLLEHDDFIYLILTLKKIPPKGR 199
           MAL D  P++ +   T  KAV++L+++  S  K +K QL + +DF+YLI+TLKKIPPKGR
Sbjct: 1   MALADVTPTTKVRRETAAKAVESLLQWRNS--KREKPQLFDQEDFLYLIVTLKKIPPKGR 58

Query: 200 TNPYKIPLPSPFHPFDSSQELCLIIDDRSKTKFSLTSESAKKKVQAENIPXXXXXXXXXX 379
           TNPYKIPLP   H    S ELCLIIDDR  TK +LT + A+KK+Q+ENIP          
Sbjct: 59  TNPYKIPLPHSLH--SDSSELCLIIDDR--TKSNLTKDDARKKIQSENIPISKVIKLSKL 114

Query: 380 XXDYKPFEAKRKLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXXVDLSHKNWKEQIK 559
             DY+PFEAKRKLC SYDMFFAD R+IPLLP  LGK           ++L HKNWKEQ++
Sbjct: 115 KSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVE 174

Query: 560 GACEAALFYLRTGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLS 739
            +C + L YLRTGTCSV+K+ + S E  EIVDNV+AA+ GI E+VPKKW NVRS  LK+ 
Sbjct: 175 RSCSSGLLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFXLKVL 234

Query: 740 ESLALPVYQTVPDIGMKI-AGVEKREEKM-DVDXXXXXXXXXXXXXXXXXXXXXXXXXIH 913
           ES+ALP+YQTVP++  KI AGV+ +E+++   +                         IH
Sbjct: 235 ESIALPIYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKGRIH 294

Query: 914 EIQYLDNN 937
           EI+Y+D N
Sbjct: 295 EIRYMDTN 302


>ref|XP_004143917.1| PREDICTED: ribosomal L1 domain-containing protein 1-like isoform 1
           [Cucumis sativus] gi|449452342|ref|XP_004143918.1|
           PREDICTED: ribosomal L1 domain-containing protein 1-like
           isoform 2 [Cucumis sativus]
          Length = 364

 Score =  295 bits (756), Expect = 2e-77
 Identities = 157/308 (50%), Positives = 202/308 (65%), Gaps = 4/308 (1%)
 Frame = +2

Query: 26  MALED--PSSNLNPTTIGKAVDALVKYNKSQTKNKKAQLLEHDDFIYLILTLKKIPPKGR 199
           MAL D  P++ +   T  KAV++L+++  S  K +K QL + +DF+YLI+TLKKIPPKGR
Sbjct: 1   MALADVTPTTKVRRETAAKAVESLLQWRNS--KREKPQLFDQEDFLYLIVTLKKIPPKGR 58

Query: 200 TNPYKIPLPSPFHPFDSSQELCLIIDDRSKTKFSLTSESAKKKVQAENIPXXXXXXXXXX 379
           TNPYKIPLP   H    S ELCLIIDDR  TK +LT + A+KK+Q+ENIP          
Sbjct: 59  TNPYKIPLPHSLH--SDSSELCLIIDDR--TKSNLTKDDARKKIQSENIPISKVIKLSKL 114

Query: 380 XXDYKPFEAKRKLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXXVDLSHKNWKEQIK 559
             DY+PFEAKRKLC SYDMFFAD R+IPLLP  LGK           ++L HKNWKEQ++
Sbjct: 115 KSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVE 174

Query: 560 GACEAALFYLRTGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLS 739
            +C + L YLRTGTCSV+K+ + S E  EIVDNV+AA+ GI E+VPKKW NVRS  LK+ 
Sbjct: 175 RSCSSGLLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVL 234

Query: 740 ESLALPVYQTVPDIGMKI-AGVEKREEKM-DVDXXXXXXXXXXXXXXXXXXXXXXXXXIH 913
           ES+ALP+YQTVP++  KI AGV+ +E+++   +                         IH
Sbjct: 235 ESIALPIYQTVPELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKGRIH 294

Query: 914 EIQYLDNN 937
           EI+Y+D N
Sbjct: 295 EIRYMDTN 302


>gb|AFK37631.1| unknown [Medicago truncatula]
          Length = 432

 Score =  293 bits (751), Expect = 7e-77
 Identities = 151/294 (51%), Positives = 198/294 (67%), Gaps = 1/294 (0%)
 Frame = +2

Query: 56  NPTTIGKAVDALVKYNKSQTKNKKAQLLEHDD-FIYLILTLKKIPPKGRTNPYKIPLPSP 232
           N  T+ KAVD+L+K+ KS+ + +K +L + D+ F+YLILTLKKIP KGR NP+KIP+P  
Sbjct: 7   NSDTVAKAVDSLLKWRKSRLETEKPKLFDEDEEFVYLILTLKKIPSKGRVNPHKIPIPHS 66

Query: 233 FHPFDSSQELCLIIDDRSKTKFSLTSESAKKKVQAENIPXXXXXXXXXXXXDYKPFEAKR 412
                ++ E CLIIDDR+     +T + A+KKVQ+E+IP            DY+PFEAKR
Sbjct: 67  L--ISAASEQCLIIDDRANKPSRITKDEAQKKVQSESIPISKILKLSKLMTDYRPFEAKR 124

Query: 413 KLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXXVDLSHKNWKEQIKGACEAALFYLR 592
           KLC SYD+FFADK I+PLLPR LGK+          VDL  KNWKEQI+ AC +AL +LR
Sbjct: 125 KLCNSYDLFFADKAIVPLLPRLLGKQFFKKRKIPVQVDLQKKNWKEQIEKACSSALLFLR 184

Query: 593 TGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLSESLALPVYQTV 772
           TGTCSV+K+ K+S ER+EIV+NVVAA++G+VE++PKKW  VRS H+KL ESLALPVYQ V
Sbjct: 185 TGTCSVVKVAKLSMERDEIVENVVAAMEGVVEVLPKKWAVVRSFHVKLLESLALPVYQAV 244

Query: 773 PDIGMKIAGVEKREEKMDVDXXXXXXXXXXXXXXXXXXXXXXXXXIHEIQYLDN 934
           PD+ +KI GV+  E+K+  D                         IHEI+Y+D+
Sbjct: 245 PDVRLKIEGVKDLEDKLVKD----------EKKVKDAKKSKKKGRIHEIKYMDD 288


>ref|XP_003595972.1| Ribosomal L1 domain-containing protein [Medicago truncatula]
           gi|355485020|gb|AES66223.1| Ribosomal L1
           domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  293 bits (751), Expect = 7e-77
 Identities = 151/294 (51%), Positives = 198/294 (67%), Gaps = 1/294 (0%)
 Frame = +2

Query: 56  NPTTIGKAVDALVKYNKSQTKNKKAQLLEHDD-FIYLILTLKKIPPKGRTNPYKIPLPSP 232
           N  T+ KAVD+L+K+ KS+ + +K +L + D+ F+YLILTLKKIP KGR NP+KIP+P  
Sbjct: 7   NSDTVAKAVDSLLKWRKSRLETEKPKLFDEDEEFVYLILTLKKIPSKGRVNPHKIPIPHS 66

Query: 233 FHPFDSSQELCLIIDDRSKTKFSLTSESAKKKVQAENIPXXXXXXXXXXXXDYKPFEAKR 412
                ++ E CLIIDDR+     +T + A+KKVQ+E+IP            DY+PFEAKR
Sbjct: 67  L--ISAASEQCLIIDDRANKPSRITKDEAQKKVQSESIPISKILKLSKLMTDYRPFEAKR 124

Query: 413 KLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXXVDLSHKNWKEQIKGACEAALFYLR 592
           KLC SYD+FFADK I+PLLPR LGK+          VDL  KNWKEQI+ AC +AL +LR
Sbjct: 125 KLCNSYDLFFADKAIVPLLPRLLGKQFFKKRKIPVQVDLQKKNWKEQIEKACSSALLFLR 184

Query: 593 TGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLSESLALPVYQTV 772
           TGTCSV+K+ K+S ER+EIV+NVVAA++G+VE++PKKW  VRS H+KL ESLALPVYQ V
Sbjct: 185 TGTCSVVKVAKLSMERDEIVENVVAAMEGVVEVLPKKWAVVRSFHVKLLESLALPVYQAV 244

Query: 773 PDIGMKIAGVEKREEKMDVDXXXXXXXXXXXXXXXXXXXXXXXXXIHEIQYLDN 934
           PD+ +KI GV+  E+K+  D                         IHEI+Y+D+
Sbjct: 245 PDVRLKIEGVKDLEDKLVKD----------EKKVKDAKKSKKKGRIHEIKYMDD 288


>ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Glycine
            max]
          Length = 408

 Score =  293 bits (749), Expect = 1e-76
 Identities = 160/338 (47%), Positives = 217/338 (64%), Gaps = 2/338 (0%)
 Frame = +2

Query: 44   SSNLNPTTIGKAVDALVKYNKSQTKNKKAQLL-EHDDFIYLILTLKKIPPKGRTNPYKIP 220
            S N++P T+ KAVDAL+++ +SQ++ +K +LL E ++F+YLILTLKKIP K R NP+KIP
Sbjct: 3    SENVSPETVSKAVDALLQWRRSQSEIQKPKLLGEDEEFVYLILTLKKIPSKSRVNPHKIP 62

Query: 221  LP-SPFHPFDSSQELCLIIDDRSKTKFSLTSESAKKKVQAENIPXXXXXXXXXXXXDYKP 397
            LP S   PF    E CLI+DDR   K  +T   A+ K+Q+E+IP            DY+P
Sbjct: 63   LPHSLISPFS---EQCLILDDRPN-KARVTKAQAQAKIQSESIPVHKVLKLSKLASDYRP 118

Query: 398  FEAKRKLCTSYDMFFADKRIIPLLPRQLGKEXXXXXXXXXXVDLSHKNWKEQIKGACEAA 577
            FEAKRKLC SYD+FFA+K I+PLLPR LGK           VDL   +WKEQ++ AC +A
Sbjct: 119  FEAKRKLCDSYDLFFAEKSIVPLLPRLLGKSFFKKRKIPVPVDLKKGSWKEQVERACSSA 178

Query: 578  LFYLRTGTCSVIKIGKVSQERNEIVDNVVAAVKGIVEIVPKKWGNVRSLHLKLSESLALP 757
            + ++RTGTCSV+++ KV  ER+EIV+NVVAA++GIVE+VPKKWGNVRSLHLKL ES+ALP
Sbjct: 179  MLFMRTGTCSVVRVAKVRMERDEIVENVVAAIEGIVEVVPKKWGNVRSLHLKLLESVALP 238

Query: 758  VYQTVPDIGMKIAGVEKREEKMDVDXXXXXXXXXXXXXXXXXXXXXXXXXIHEIQYLDNN 937
            VYQTVPD+ +KI G +  E+K + +                         IHE++Y+D N
Sbjct: 239  VYQTVPDVKLKIEGFKVEEKKNEKE---RDGEVSDSIEGGTEKKKKKKGRIHEVRYMDEN 295

Query: 938  XXXXXXXXXXXXXXXXINVDALVEVLDKKRKKSESAQM 1051
                             + D+  E++ KKRKK  S+++
Sbjct: 296  VVEAGMEDELASD----DDDSEDEMVSKKRKKGVSSEL 329