BLASTX nr result

ID: Coptis23_contig00002042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002042
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311431.1| predicted protein [Populus trichocarpa] gi|2...    55   9e-06

>ref|XP_002311431.1| predicted protein [Populus trichocarpa] gi|222851251|gb|EEE88798.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 29/63 (46%), Positives = 36/63 (57%)
 Frame = -3

Query: 601 SGFEKNRREKRAAITAAPVFKNQSASSTAAXXXXXXXXXXXXXKAIAASNLLTAGISPSS 422
           S F+KNR++KRA I+AA +F   S SS +               A AA+NLLT G  PSS
Sbjct: 233 SKFDKNRKDKRALISAASIFPGSSGSSMSNKKRLELESKRRKISAAAATNLLTGGFKPSS 292

Query: 421 WSQ 413
           WSQ
Sbjct: 293 WSQ 295


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