BLASTX nr result
ID: Coptis23_contig00002040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002040
(1977 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280712.1| PREDICTED: uncharacterized protein LOC100262... 456 e-126
ref|XP_002514263.1| elongation factor ts, putative [Ricinus comm... 390 e-106
ref|XP_002325009.1| predicted protein [Populus trichocarpa] gi|2... 384 e-104
ref|XP_004150558.1| PREDICTED: uncharacterized protein LOC101216... 375 e-101
ref|XP_004169613.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 368 3e-99
>ref|XP_002280712.1| PREDICTED: uncharacterized protein LOC100262932 [Vitis vinifera]
Length = 1135
Score = 456 bits (1174), Expect = e-126
Identities = 289/626 (46%), Positives = 375/626 (59%), Gaps = 21/626 (3%)
Frame = +3
Query: 162 MMPVLPCSTNNITLVHGATLGSRNNYHXXXXXXXXXXXXXXXXXXWFPKPLSTSIRVLPE 341
M PV+P S +NI+L+ G S N F PLSTS+R+ P+
Sbjct: 1 MTPVIPSSISNISLISGTAFTSNKNNCLTRCYLLGKSTKQTLSPQRFLLPLSTSVRLFPQ 60
Query: 342 YRSSCRL----RVHILAATGTDVAVEEPSSTTAGEDADGTSEVPTNAVXXXXXXXXXXXX 509
YRS C L R HIL+ATGTDVAVE+ S + A ED+ G EVP+++
Sbjct: 61 YRSGCTLHRKSRTHILSATGTDVAVEQ-SDSPATEDSSGAPEVPSDSAEASEEPSIKSDG 119
Query: 510 XXXPDSQSKRPRPARRSDLPTLKNEELLPGATFTGKVKSIQPFGAFVDFGAFTDGLVHVS 689
SQ KR RP R+S++P +KNEEL+PGATFTGKVKSIQPFGAF+DFGAFTDGLVHVS
Sbjct: 120 GVT-SSQPKRARP-RKSEMPPVKNEELVPGATFTGKVKSIQPFGAFIDFGAFTDGLVHVS 177
Query: 690 QLXXXXXXXXXXXXXIGQEVKVRLVEANLETKRISLTMRADDDISKLQQRKDSSGANSDK 869
+L IGQEVKVRLVEAN ET RISLTMR DD +K QQ+KD++ ++SDK
Sbjct: 178 RLSDSYVKDVGNIVSIGQEVKVRLVEANTETGRISLTMRDSDDPTKPQQQKDAA-SSSDK 236
Query: 870 SRPGRKP-----------QKSSKFVKGQDVEGTVKNTNRAGAFISLPEGEEGFLPVSEEY 1016
RP R+ +K+SKFVKGQD+EGTVKN NRAGAFISLPEGEEGFLP SEE
Sbjct: 237 PRPSRRNTQRSNQRRDEVKKTSKFVKGQDLEGTVKNLNRAGAFISLPEGEEGFLPTSEEA 296
Query: 1017 NEGFASLTDRSSMEIGQEVSVRVLRITRGQVTLTMKKEEDIEESNSKVIQGVVHVATNPF 1196
+EGF +L SS+++GQEVSVRVLRI+RGQVTLTMKKEED E+ + K+ +GVVH ATNPF
Sbjct: 297 DEGFGNLMGGSSLQVGQEVSVRVLRISRGQVTLTMKKEEDAEKLDLKLGEGVVHTATNPF 356
Query: 1197 ARAFRENKDIAAFLDQTESMQKSAQASVVTENSEKIEGKIXXXXXXXXXXXVQEM---SN 1367
AFR+NK+IA FLD+ E + A+ + + SE+IEGK+ VQ+ S+
Sbjct: 357 VLAFRKNKEIATFLDEREKTVEPAEIPAIPKTSEEIEGKVNQAETVTDILEVQDQPASSD 416
Query: 1368 EGQLSFSSTVDDVAKDDITSPVETDKEVEASGTSLNDAVNDDKASPEEVEIDVEASRTPS 1547
E +S S VD+ + D T +E++ ++++DA+N
Sbjct: 417 EKSVSVPSAVDEKVEGDET----PSEELDVGASAVDDALN-------------------- 452
Query: 1548 DLAPAEPVSADENPEDTVSSSLKSVDAANESIQKE-ESSESLTPEDSVSTS--LTEENTV 1718
E S E+ E +S+SL+S DA +K SSE L E S+ST+ + EE +
Sbjct: 453 -----EMASNSEDSESVISNSLQSGDAVQTIEEKAVVSSEVLASERSISTASQIIEEASA 507
Query: 1719 TDVVKDNAVESISKAEVGADHITPTENVASAEALESRAEDCVVKDEVKDASPSTVENAIP 1898
T V +A S A AD I +E++ E ES+++D + K EV+ +P VE
Sbjct: 508 THEVGSDAKSDPSTAI--ADQILSSESLVGKEVEESQSDDTIAKVEVQIETPPIVE---- 561
Query: 1899 SPSPDGDTKAEPIPEKNGSVTTSSGQ 1976
P + K +P PEKNGSVT+S+GQ
Sbjct: 562 ---PVEEEKVDPTPEKNGSVTSSNGQ 584
>ref|XP_002514263.1| elongation factor ts, putative [Ricinus communis]
gi|223546719|gb|EEF48217.1| elongation factor ts,
putative [Ricinus communis]
Length = 972
Score = 390 bits (1001), Expect = e-106
Identities = 258/630 (40%), Positives = 355/630 (56%), Gaps = 25/630 (3%)
Frame = +3
Query: 162 MMPVLPCSTNNITLVHGATLGSRNNYHXXXXXXXXXXXXXXXXXXWFPKPLSTSIRVLPE 341
M V+PCST++I+L+ G + N + PL TS+ + P
Sbjct: 1 MTTVVPCSTSSISLIPGTPFRLKKNNNLTRCNLLRKSSKHVISSQRHVLPLLTSVGLFPH 60
Query: 342 YRSSC----RLRVHILAATGTD--VAVEEPSSTTAGEDADGTSEVPTNAVXXXXXXXXXX 503
YR C R V+ ++ATGTD V +EEP S E++ G S++P +A
Sbjct: 61 YRRDCNWLHRSIVYGVSATGTDTDVVIEEPESPVTDENSGGASDIPADAAETSENSSIKS 120
Query: 504 XXXXXPDSQSKRPRPARRSDLPTLKNEELLPGATFTGKVKSIQPFGAFVDFGAFTDGLVH 683
P +Q+KR RP R+S++P + NEEL+PGATFTGKV+SIQPFGAFVDFGAFTDGLVH
Sbjct: 121 DSNRAP-AQTKRSRPGRKSEMPPVTNEELIPGATFTGKVRSIQPFGAFVDFGAFTDGLVH 179
Query: 684 VSQLXXXXXXXXXXXXXIGQEVKVRLVEANLETKRISLTMRADDDISKLQQRKDS-SGAN 860
VS+L +GQEV VRLVEAN ET RISLTMR DD +K QQ++D+ + A+
Sbjct: 180 VSRLSDNFVKDVGNVVSVGQEVTVRLVEANTETGRISLTMRESDDTNKSQQQRDAPATAS 239
Query: 861 SDKSRPGRK----------PQKSSKFVKGQDVEGTVKNTNRAGAFISLPEGEEGFLPVSE 1010
S K RPGR+ K SKFVKGQ++EGTVKN R+G FISLPEGEEGFLP SE
Sbjct: 240 SGKPRPGRRNAPKSGQRREDNKISKFVKGQELEGTVKNLTRSGTFISLPEGEEGFLPTSE 299
Query: 1011 EYNEGFASLTDRSSMEIGQEVSVRVLRITRGQVTLTMKKEEDIEESNSKVIQGVVHVATN 1190
E + G S+ SS+E+GQEVSVRVLRI+RGQVTLTMKKEED + N++++QGVVH ATN
Sbjct: 300 ESDGGLESMMGGSSLEVGQEVSVRVLRISRGQVTLTMKKEED-NKLNTELLQGVVHAATN 358
Query: 1191 PFARAFRENKDIAAFLDQTESMQKSAQASVVTENSEKIEGKIXXXXXXXXXXXVQ---EM 1361
PF AFR+N+DI++FL++ E M+K A V + ++ + VQ
Sbjct: 359 PFVLAFRKNRDISSFLEEREKMEKVANQPVEPKIPVEVGEQEKQTETVSDILEVQGQPSS 418
Query: 1362 SNEGQLSFSSTVDDVAKDDITSPVETDKEVEASGTSLNDAVNDDKASPEEVEIDVEASRT 1541
SNEG S +STV + D+ TSP E +E +G
Sbjct: 419 SNEGSDSVTSTVAETLVDE-TSPKEVAEEPSIAGD------------------------- 452
Query: 1542 PSDLAPAEPVSADENPEDTVSSSLKSVDAANESIQKEESSESLTPE--DSVST--SLTEE 1709
DE P SSS +SV+AA ++++KE S TP+ SVST ++TE+
Sbjct: 453 ------------DEVPGSIESSSPQSVEAAVQTVEKEAEESSGTPDPIGSVSTADNITEQ 500
Query: 1710 NTVTDVVKDNAVESISKAEVGADHITPTENVASAEALESRAEDCVVKDEVKDASPSTVEN 1889
+TD + + +S E+ ++ TP + A+ E +E++ + + +E++ EN
Sbjct: 501 TPLTDEMGSDG-KSGPYGEISSEVSTPV-SPAAEEVVENQLGESITNEELQ---TPIAEN 555
Query: 1890 AIPSPSP-DGDTKAEPIPEKNGSVTTSSGQ 1976
I S +P + + P++NGS+T S Q
Sbjct: 556 EISSIAPVEDEGTGATSPDENGSITGSGEQ 585
>ref|XP_002325009.1| predicted protein [Populus trichocarpa] gi|222866443|gb|EEF03574.1|
predicted protein [Populus trichocarpa]
Length = 976
Score = 384 bits (986), Expect = e-104
Identities = 245/568 (43%), Positives = 323/568 (56%), Gaps = 25/568 (4%)
Frame = +3
Query: 162 MMPVLPCSTNNITLVHGATLGSRNNYHXXXXXXXXXXXXXXXXXXWFPKPLSTSIRVLPE 341
M PVLPCST+NI L+ G N PL +++ P+
Sbjct: 1 MTPVLPCSTSNICLIPGTAFSINKNNSLKNGSLSRKSTKYASSSQRLVLPLPGFVKLFPQ 60
Query: 342 YRSSC----RLRVHILAATGTDVAVEEPSSTTAGEDADGTSEVPTNAVXXXXXXXXXXXX 509
Y C R H ++ATGTDVAVEEP S +D+DG SE+P +AV
Sbjct: 61 YHRDCAMVHRSVAHAVSATGTDVAVEEPDSPVVDKDSDGVSEIPADAVETIDSSTKAGSS 120
Query: 510 XXXPDSQSKRPRPARRSDLPTLKNEELLPGATFTGKVKSIQPFGAFVDFGAFTDGLVHVS 689
+QS R + +R+S++P +KNE+L+PGATFTGKV+SIQPFGAFVDFGAFTDGLVHVS
Sbjct: 121 PAP--AQSSRSKGSRKSEMPPVKNEDLVPGATFTGKVRSIQPFGAFVDFGAFTDGLVHVS 178
Query: 690 QLXXXXXXXXXXXXXIGQEVKVRLVEANLETKRISLTMRADDDISKLQQRKDSSGANSDK 869
+L +GQEVKVRLVEAN ET RISLTMR +DD SK QQR DS S
Sbjct: 179 KLSDSFVKDVGSVVSVGQEVKVRLVEANTETGRISLTMRENDDTSKFQQRNDSPATGSSN 238
Query: 870 SRPGR----KPQ------KSSKFVKGQDVEGTVKNTNRAGAFISLPEGEEGFLPVSEEYN 1019
+ R KP KSSKFVKGQ++EGTVKN R+GAFISLPEGEEGFLP SEE +
Sbjct: 239 RQAARRNTSKPNQRKDEVKSSKFVKGQNLEGTVKNLTRSGAFISLPEGEEGFLPRSEESD 298
Query: 1020 EGFASLTDRSSMEIGQEVSVRVLRITRGQVTLTMKKEEDIEESNSKVIQGVVHVATNPFA 1199
+ FA + SS++IGQEVSVRVLRITRGQVTLTMKK ED ++ ++++IQG+VH ATNPF
Sbjct: 299 DVFAGMMGDSSLQIGQEVSVRVLRITRGQVTLTMKK-EDADKRDTELIQGIVHTATNPFM 357
Query: 1200 RAFRENKDIAAFLDQTESMQKSAQASVVTENSEKIEGKIXXXXXXXXXXXVQEMSNEGQL 1379
AFR+NKDIAAFLD+ E + TE EK + E + L
Sbjct: 358 LAFRKNKDIAAFLDERE---------IATEQPEK----------PIPSVQIGEKNQAEPL 398
Query: 1380 SFSSTVDD--VAKDDITS--PVETDKEVEASGTSLNDA-----VNDDKASPEEVEIDVEA 1532
+ V D V+ D+++S P D+ VE TSL + V D+ PE VE V++
Sbjct: 399 PNIAEVQDQPVSNDEVSSGIPSMVDESVEGDETSLKEVVVGANVASDEKQPETVESSVDS 458
Query: 1533 SRTPSDLAPAEPVSADENPEDTVSSSLKSVDAANESIQKEESSESLTPEDSV--STSLTE 1706
T + V+ + PE SS+ ++VD ++++K+ ++ +S+ STS
Sbjct: 459 --TLQTVEKEAEVTGYKEPESIESSTPQNVDDTVQTLEKKAVADDDKEPESMESSTSQNA 516
Query: 1707 ENTVTDVVKDNAVESISKAEVGADHITP 1790
++TV + K+ + + I+P
Sbjct: 517 DDTVQALEKEAEANDKEPESIESTTISP 544
>ref|XP_004150558.1| PREDICTED: uncharacterized protein LOC101216355 [Cucumis sativus]
Length = 1122
Score = 375 bits (962), Expect = e-101
Identities = 243/583 (41%), Positives = 332/583 (56%), Gaps = 28/583 (4%)
Frame = +3
Query: 300 FPKPLSTSIRVLPEYRS----SCRLRVHILAATGTDVAVEEPSSTTAGEDADGTSEVPTN 467
F PLSTS+R+ P S R+ I +ATGTDVAVEE S +GE++ SE+ +
Sbjct: 46 FLLPLSTSVRLFPNCTKNLFCSHGRRIRIFSATGTDVAVEESDSPVSGEESTQNSELTSG 105
Query: 468 AVXXXXXXXXXXXXXXXPDSQSKRPRPARRSDLPTLKNEELLPGATFTGKVKSIQPFGAF 647
A+ +Q+KR RP R+S++P + NEEL+PGATFTGKV+SIQPFGAF
Sbjct: 106 AISTNEETPVKSDVAP---TQTKRSRPVRKSEMPAVNNEELIPGATFTGKVRSIQPFGAF 162
Query: 648 VDFGAFTDGLVHVSQLXXXXXXXXXXXXXIGQEVKVRLVEANLETKRISLTMRADDDISK 827
VDFGAFTDGLVHVS+L +GQEVKVRL+EAN E RISL+MR +D+ +
Sbjct: 163 VDFGAFTDGLVHVSRLSDSYVKDVASVVSVGQEVKVRLIEANAEAGRISLSMRENDERKE 222
Query: 828 LQQRKDSSGANSDKSRPGRKPQ-----KSSKFVKGQDVEGTVKNTNRAGAFISLPEGEEG 992
D G++ + R P+ KSS FVKGQD++GTVKN R+GAFISLPEGEEG
Sbjct: 223 SPASNDKPGSSRKSAPKARGPRRDEVKKSSNFVKGQDLQGTVKNITRSGAFISLPEGEEG 282
Query: 993 FLPVSEEYNEGFASLTDRSSMEIGQEVSVRVLRITRGQVTLTMKKEEDIEESNSKVIQGV 1172
FLP SEE EGF +L S++EIGQEV+VRVLRI RG+VTLTMKK+ED ++S+S+ IQG
Sbjct: 283 FLPSSEETFEGFGNLMGGSTLEIGQEVNVRVLRIARGRVTLTMKKDEDNDKSDSQFIQGK 342
Query: 1173 VHVATNPFARAFRENKDIAAFLDQTESMQKSAQASVVTENSEKIEG-------KIXXXXX 1331
V+ ATNPF AFR+N DIA FLD+ ES++++A SVV + +E +EG +
Sbjct: 343 VYAATNPFLLAFRKNNDIATFLDERESIEEAANKSVVQKVTEIVEGIVDADQIEADDKVE 402
Query: 1332 XXXXXXVQEMSNEGQLSFSSTVDDVAKDDITSPVETDKEV----------EASGTSLNDA 1481
V E E + S+ VA+DD S + T + V EA G S A
Sbjct: 403 KSVPPAVDEAVKEDEPERSADSSAVAQDDSKSILSTSEGVVDGVVDAENKEAEGNSEIKA 462
Query: 1482 VNDDKASPEEVEIDVEASRTPSDLAPAEPVSADENPEDTVSSSLKSVDAANESIQKE--E 1655
+DD P ++ +D S D + V+ DE E T+S+S VDA ++ +K+ E
Sbjct: 463 -SDDNQLPNDLAVD--KSEVLDDSSSDVLVTQDEG-ESTLSTSDNIVDAVTDTTEKKAGE 518
Query: 1656 SSESLTPEDSVSTSLTEENTVTDVVKDNAVESISKAEVGADHITPTENVASAEALESRAE 1835
SSE ED S + + ++ + A+ + +E+ S E + E
Sbjct: 519 SSEVKQSEDEQSEEVRVVEAAQPIDGPETDGQVAVPDDEANKLVSSESSVSEELV--AGE 576
Query: 1836 DCVVKDEVKDASPSTVENAIPSPSPDGDTKAEPIPEKNGSVTT 1964
D V ++ + S +EN I S S + +P + NGS+T+
Sbjct: 577 DSVAAEKESEQSRKDLENEIVSASSSEKEEDKPESDSNGSITS 619
>ref|XP_004169613.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101216355 [Cucumis
sativus]
Length = 1106
Score = 368 bits (945), Expect = 3e-99
Identities = 242/580 (41%), Positives = 331/580 (57%), Gaps = 25/580 (4%)
Frame = +3
Query: 300 FPKPLSTSIRVLPEYRS---SCRLRVHILAATGTDVAVEEPSSTTAGEDADGTSEVPTNA 470
F PLSTS+R+ P + S R+ I +ATGTDVAVEE S +GE++ SE+ + A
Sbjct: 46 FLLPLSTSVRLFPNHXKPFCSHGRRIRIFSATGTDVAVEESDSPVSGEESTQNSELTSGA 105
Query: 471 VXXXXXXXXXXXXXXXPDSQSKRPRPARRSDLPTLKNEELLPGATFTGKVKSIQPFGAFV 650
+ +Q+KR RP R+S++P + NEEL+PGATFTGKV+SIQPFGAFV
Sbjct: 106 ISTNEETPVKSDVAP---TQTKRSRPVRKSEMPAVNNEELIPGATFTGKVRSIQPFGAFV 162
Query: 651 DFGAFTDGLVHVSQLXXXXXXXXXXXXXIGQEVKVRLVEANLETKRISLTMRADDDISKL 830
DFGAFTDGLVHVS+L +GQEVKVRL+EAN E RISL+MR +D+ +
Sbjct: 163 DFGAFTDGLVHVSRLSDSYVKDVASVVSVGQEVKVRLIEANAEAGRISLSMRENDERKES 222
Query: 831 QQRKDSSGANSDKSRPGRKPQ-----KSSKFVKGQDVEGTVKNTNRAGAFISLPEGEEGF 995
D G++ + R P+ KSS FVKGQD++GTVKN R+GAFISLPEGEEGF
Sbjct: 223 PASNDKPGSSRKSAPKARGPRRDEVKKSSNFVKGQDLQGTVKNITRSGAFISLPEGEEGF 282
Query: 996 LPVSEEYNEGFASLTDRSSMEIGQEVSVRVLRITRGQVTLTMKKEEDIEESNSKVIQGVV 1175
LP SEE EGF +L S++EIGQEV+VRVLRI RG+VTLTMKK+ED ++S+S+ IQG V
Sbjct: 283 LPSSEETFEGFGNLMGGSTLEIGQEVNVRVLRIARGRVTLTMKKDEDNDKSDSQFIQGKV 342
Query: 1176 HVATNPFARAFRENKDIAAFLDQTESMQKSAQASVVTENSEKIEG-------KIXXXXXX 1334
+ ATNPF AFR+N DIA FLD+ ES++++A SVV + +E +EG +
Sbjct: 343 YAATNPFLLAFRKNNDIATFLDERESIEEAANKSVVQKVTEIVEGIVDADQIEADDKVEK 402
Query: 1335 XXXXXVQEMSNEGQLSFSSTVDDVAKDDITSPVETDKEV----------EASGTSLNDAV 1484
V E E + S+ VA+DD S + T + V EA G S A
Sbjct: 403 SVPPAVDEAVKEDEPERSADSSAVAQDDSKSILSTSEGVVDGVVDAENKEAEGNSEIKA- 461
Query: 1485 NDDKASPEEVEIDVEASRTPSDLAPAEPVSADENPEDTVSSSLKSVDAANESIQKEESSE 1664
+DD P ++ +D S D + V+ DE E T+S+S VDA ++ +K++
Sbjct: 462 SDDNQLPNDLAVD--KSEVLDDSSSDVLVTQDEG-ESTLSTSDNIVDAVTDTTEKKQG-- 516
Query: 1665 SLTPEDSVSTSLTEENTVTDVVKDNAVESISKAEVGADHITPTENVASAEALESRAEDCV 1844
+ S T+ E + V D A + +S +E+ S E + ED V
Sbjct: 517 KVLKLSSRKTNGPETDGQVAVPDDEANKLVS-----------SESSVSEELV--AGEDSV 563
Query: 1845 VKDEVKDASPSTVENAIPSPSPDGDTKAEPIPEKNGSVTT 1964
++ + S +EN I S S + +P + NGS+T+
Sbjct: 564 AAEKESEQSRKDLENEIVSASSSEKEEDKPESDSNGSITS 603