BLASTX nr result

ID: Coptis23_contig00002037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002037
         (1552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC32109.1| ABC transporter family protein [Camellia sinensis]     446   e-122
ref|XP_002276857.1| PREDICTED: ABC transporter I family member 1...   439   e-121
ref|XP_002306861.1| ABC transporter family protein [Populus tric...   429   e-117
ref|XP_003570349.1| PREDICTED: ABC transporter I family member 1...   428   e-117
ref|XP_002454753.1| hypothetical protein SORBIDRAFT_04g036680 [S...   427   e-117

>gb|AEC32109.1| ABC transporter family protein [Camellia sinensis]
          Length = 287

 Score =  446 bits (1146), Expect = e-122
 Identities = 224/287 (78%), Positives = 243/287 (84%), Gaps = 1/287 (0%)
 Frame = -1

Query: 1075 MGKANNQSIQVSGLQFTYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHM 896
            M + N  SI+VSG+QF YD Q P+F DF L I PGSRCLLVGANGSGKTTLLKILAGKHM
Sbjct: 1    MEEKNWSSIEVSGMQFGYDGQSPVFIDFTLKILPGSRCLLVGANGSGKTTLLKILAGKHM 60

Query: 895  VGGRDVVRVLDCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEG 716
            VGGRDVVRVL+CSAFHDT LVCSGDL+YLGGSWSKTVGSAG+IPLQGDFSA HMIFGVEG
Sbjct: 61   VGGRDVVRVLNCSAFHDTHLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEG 120

Query: 715  IDPVRRENLIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXVARM 536
            +DPVRRE LIELLDIDL+WRMHKVSDGQRRRVQICMGLLHPFQ             VAR+
Sbjct: 121  VDPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARL 180

Query: 535  DLLEFFKEECEQRGATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNL 356
            DLL+FFKEECEQRGATIVYATHIFDGLETWATD+AYI  GEL+R+ KL EL ELKN++NL
Sbjct: 181  DLLDFFKEECEQRGATIVYATHIFDGLETWATDLAYIHAGELKRTDKLSELGELKNSANL 240

Query: 355  LSVVESWLRSETKRENKLVAASP-QFKKASAFDNSPFRSSRHMAYYR 218
            LSVVESWLRSET  E K     P + +K S FD+SPFRSSRHMAYYR
Sbjct: 241  LSVVESWLRSETNTEKKKPTNPPVENQKTSPFDSSPFRSSRHMAYYR 287


>ref|XP_002276857.1| PREDICTED: ABC transporter I family member 19 [Vitis vinifera]
            gi|297744168|emb|CBI37138.3| unnamed protein product
            [Vitis vinifera]
          Length = 291

 Score =  439 bits (1130), Expect = e-121
 Identities = 216/285 (75%), Positives = 247/285 (86%), Gaps = 2/285 (0%)
 Frame = -1

Query: 1066 ANNQSIQVSGLQFTYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGG 887
            +++ SI+V+GLQF Y+ QPP+F DFNL ISPGSRCLLVGANGSGKTTLL+ILAGKHMVGG
Sbjct: 7    SSSNSIKVNGLQFAYEGQPPLFLDFNLQISPGSRCLLVGANGSGKTTLLRILAGKHMVGG 66

Query: 886  RDVVRVLDCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEGIDP 707
            RDVV+VL+CSAFHDT LVCSGDL+YLGGSWSK +GSAG++PLQGDFSA HMIFGVEGI+P
Sbjct: 67   RDVVQVLNCSAFHDTHLVCSGDLSYLGGSWSKNIGSAGEVPLQGDFSAEHMIFGVEGINP 126

Query: 706  VRRENLIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXVARMDLL 527
            VRR+ L++LLDIDL+WRMHKVSDGQRRRVQICMGLLHPFQ             VARMDLL
Sbjct: 127  VRRDKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARMDLL 186

Query: 526  EFFKEECEQRGATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNLLSV 347
            EFFKEEC+QRGATIVYATHIFDGLETWATD+AY+Q+G+LR+ +KL EL ELK ++NLLSV
Sbjct: 187  EFFKEECDQRGATIVYATHIFDGLETWATDLAYVQEGDLRKIEKLSELDELKTSANLLSV 246

Query: 346  VESWLRSETKRENKLVAASP-QFKKA-SAFDNSPFRSSRHMAYYR 218
            VESWLRSETK E K     P Q ++  S FD+SPFRSSRHMAYYR
Sbjct: 247  VESWLRSETKCEKKKPINPPAQIQRTPSPFDSSPFRSSRHMAYYR 291


>ref|XP_002306861.1| ABC transporter family protein [Populus trichocarpa]
            gi|222856310|gb|EEE93857.1| ABC transporter family
            protein [Populus trichocarpa]
          Length = 274

 Score =  429 bits (1103), Expect = e-117
 Identities = 216/274 (78%), Positives = 234/274 (85%), Gaps = 1/274 (0%)
 Frame = -1

Query: 1036 LQFTYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLDCS 857
            +QF Y  Q P+F +FNL+ISPGSRCLLVGANGSGKTTLLKI+AGKHMVGGRDVVRV++ S
Sbjct: 1    MQFAYPGQHPLFYEFNLNISPGSRCLLVGANGSGKTTLLKIMAGKHMVGGRDVVRVINGS 60

Query: 856  AFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEGIDPVRRENLIELL 677
            AFHDTQLVCSGDLAYLGGSWSKTVGSAG+IPLQGDFSA HMIFGVEG DPVRRE LIELL
Sbjct: 61   AFHDTQLVCSGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGTDPVRREKLIELL 120

Query: 676  DIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXVARMDLLEFFKEECEQR 497
            DIDLKWRMHKVSDGQRRRVQICMGLLHPF+             VARMDLLEFFKEEC+QR
Sbjct: 121  DIDLKWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECDQR 180

Query: 496  GATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNLLSVVESWLRSETK 317
            GATIVYATHIFDGLETWAT +AYIQDGEL+R +KL E+ ELKN++ LLSVVESWLRSETK
Sbjct: 181  GATIVYATHIFDGLETWATHLAYIQDGELKRVKKLTEVHELKNSATLLSVVESWLRSETK 240

Query: 316  RENKLVAASP-QFKKASAFDNSPFRSSRHMAYYR 218
             E K     P Q +K S F +SPF SSRHMAYYR
Sbjct: 241  NEKKKPTNPPAQNQKTSPFGSSPFMSSRHMAYYR 274


>ref|XP_003570349.1| PREDICTED: ABC transporter I family member 19-like [Brachypodium
            distachyon]
          Length = 294

 Score =  428 bits (1101), Expect = e-117
 Identities = 212/279 (75%), Positives = 238/279 (85%), Gaps = 1/279 (0%)
 Frame = -1

Query: 1051 IQVSGLQFTYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVR 872
            I+VS LQF YD Q P+FA FNL ++PGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVR
Sbjct: 16   IEVSTLQFGYDGQAPLFARFNLRVAPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVR 75

Query: 871  VLDCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEGIDPVRREN 692
            VL+ SAFHDTQ VCSGDL+YLGGSWS+T+GSAGD+PLQGDFSA HMIFGV+G+DPVRRE 
Sbjct: 76   VLNGSAFHDTQFVCSGDLSYLGGSWSRTIGSAGDVPLQGDFSAEHMIFGVDGVDPVRREK 135

Query: 691  LIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXVARMDLLEFFKE 512
            LI+LLDIDL+WRMHKVSDGQRRRVQICMGLLHP++             V RMDLL+FFKE
Sbjct: 136  LIDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFKE 195

Query: 511  ECEQRGATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNLLSVVESWL 332
            ECEQR ATIVYATHIFDGLETWATD+AYIQ+GELR+S K  ++ ELKNA NLLSVVESWL
Sbjct: 196  ECEQREATIVYATHIFDGLETWATDIAYIQEGELRKSAKYSDIEELKNAKNLLSVVESWL 255

Query: 331  RSETKRENK-LVAASPQFKKASAFDNSPFRSSRHMAYYR 218
            +SETK   K  + A  Q +++S FD SPFRSSRHMAYYR
Sbjct: 256  KSETKLPKKEPIRAESQPRRSSPFDASPFRSSRHMAYYR 294


>ref|XP_002454753.1| hypothetical protein SORBIDRAFT_04g036680 [Sorghum bicolor]
            gi|241934584|gb|EES07729.1| hypothetical protein
            SORBIDRAFT_04g036680 [Sorghum bicolor]
          Length = 295

 Score =  427 bits (1099), Expect = e-117
 Identities = 211/279 (75%), Positives = 237/279 (84%), Gaps = 1/279 (0%)
 Frame = -1

Query: 1051 IQVSGLQFTYDNQPPIFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVR 872
            I+VS LQF YD QPP+FA FNL ++PGSRCLL+GANGSGKTTLLKILAGKHMVGGRDVVR
Sbjct: 17   IEVSALQFGYDGQPPLFARFNLRVAPGSRCLLIGANGSGKTTLLKILAGKHMVGGRDVVR 76

Query: 871  VLDCSAFHDTQLVCSGDLAYLGGSWSKTVGSAGDIPLQGDFSAAHMIFGVEGIDPVRREN 692
            VL+ SAFHDTQLVCSGDL+YLGGSWS+T+GSAGD+PLQGDFSA HMIFGV+G+DPVRRE 
Sbjct: 77   VLNGSAFHDTQLVCSGDLSYLGGSWSRTIGSAGDVPLQGDFSAEHMIFGVDGVDPVRREK 136

Query: 691  LIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFQXXXXXXXXXXXXXVARMDLLEFFKE 512
            L++LLDIDL+WRMHKVSDGQRRRVQICMGLLHP++             V RMDLL+FFKE
Sbjct: 137  LVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFKE 196

Query: 511  ECEQRGATIVYATHIFDGLETWATDVAYIQDGELRRSQKLVELPELKNASNLLSVVESWL 332
            ECEQR ATIVYATHIFDGLETWATD AYIQ+GELRRS +  ++ ELK+A NLLSVVESWL
Sbjct: 197  ECEQREATIVYATHIFDGLETWATDFAYIQEGELRRSGRYSDIEELKSAKNLLSVVESWL 256

Query: 331  RSETKRENK-LVAASPQFKKASAFDNSPFRSSRHMAYYR 218
            RSETK   K L     Q +++S  D SPFRSSRHMAYYR
Sbjct: 257  RSETKLPKKELPRPETQARRSSPLDASPFRSSRHMAYYR 295


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