BLASTX nr result

ID: Coptis23_contig00002035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002035
         (1527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66752.1| hypothetical protein VITISV_018061 [Vitis vinifera]   308   2e-81
ref|XP_002275856.1| PREDICTED: vacuolar protein sorting-associat...   307   4e-81
ref|XP_002520207.1| Vacuolar protein sorting protein, putative [...   306   9e-81
gb|EEC71212.1| hypothetical protein OsI_03132 [Oryza sativa Indi...   306   9e-81
ref|XP_002326750.1| predicted protein [Populus trichocarpa] gi|2...   305   3e-80

>emb|CAN66752.1| hypothetical protein VITISV_018061 [Vitis vinifera]
          Length = 179

 Score =  308 bits (790), Expect = 2e-81
 Identities = 149/179 (83%), Positives = 165/179 (92%)
 Frame = -3

Query: 697 MQKLGEFKLPPFFNYPPYFTLQAVKDTRERQVQLWKELILDYCRTHKIFLIPLEEDFLLF 518
           MQKLG+ KLP FFNYPPYFTLQ V+DTRE+QVQLWKELILDYCRT KIF+I LEE+F LF
Sbjct: 1   MQKLGDLKLPNFFNYPPYFTLQLVRDTREKQVQLWKELILDYCRTQKIFVIGLEEEFPLF 60

Query: 517 TNPLIQRSLTHEAKEVFLSALVSEGRAEWIDKGHKKCLILWLRIQDWADCILRFVKDNGL 338
           +NP+I+R+L+HEAKE FLSALVSEGRAEW+DKGHKKCLILW RIQDWAD ILRFV++NGL
Sbjct: 61  SNPVIERTLSHEAKEAFLSALVSEGRAEWMDKGHKKCLILWHRIQDWADLILRFVRENGL 120

Query: 337 EDSVMTVEEIRTGIESRGTELHGMDHNVLMRALKLLENKGKAAIFKGTSADDEGVKFSV 161
           EDSVMTVEEIR+G ESRGTELHGMD  VLMRALK LE+KGK AIFKGTSADDEGVKFS+
Sbjct: 121 EDSVMTVEEIRSGTESRGTELHGMDRTVLMRALKQLEHKGKLAIFKGTSADDEGVKFSL 179


>ref|XP_002275856.1| PREDICTED: vacuolar protein sorting-associated protein 25 [Vitis
           vinifera] gi|297742019|emb|CBI33806.3| unnamed protein
           product [Vitis vinifera]
          Length = 179

 Score =  307 bits (787), Expect = 4e-81
 Identities = 148/179 (82%), Positives = 165/179 (92%)
 Frame = -3

Query: 697 MQKLGEFKLPPFFNYPPYFTLQAVKDTRERQVQLWKELILDYCRTHKIFLIPLEEDFLLF 518
           MQKLG+ KLP FFNYPPYFTLQ V+DTRE+QVQLWKELILDYCRT KIF+I LEE+F LF
Sbjct: 1   MQKLGDLKLPNFFNYPPYFTLQPVRDTREKQVQLWKELILDYCRTQKIFVIGLEEEFPLF 60

Query: 517 TNPLIQRSLTHEAKEVFLSALVSEGRAEWIDKGHKKCLILWLRIQDWADCILRFVKDNGL 338
           +NP+I+R+L+HEAKE FLSALV+EGRAEW+DKGHKKCLILW RIQDWAD ILRFV++NGL
Sbjct: 61  SNPVIERTLSHEAKEAFLSALVAEGRAEWMDKGHKKCLILWHRIQDWADLILRFVRENGL 120

Query: 337 EDSVMTVEEIRTGIESRGTELHGMDHNVLMRALKLLENKGKAAIFKGTSADDEGVKFSV 161
           EDSVMTVEEIR+G ESRGTELHGMD  VLMRALK LE+KGK AIFKGTSADDEGVKFS+
Sbjct: 121 EDSVMTVEEIRSGTESRGTELHGMDRTVLMRALKQLEHKGKLAIFKGTSADDEGVKFSL 179


>ref|XP_002520207.1| Vacuolar protein sorting protein, putative [Ricinus communis]
           gi|223540699|gb|EEF42262.1| Vacuolar protein sorting
           protein, putative [Ricinus communis]
          Length = 179

 Score =  306 bits (784), Expect = 9e-81
 Identities = 143/179 (79%), Positives = 166/179 (92%)
 Frame = -3

Query: 697 MQKLGEFKLPPFFNYPPYFTLQAVKDTRERQVQLWKELILDYCRTHKIFLIPLEEDFLLF 518
           MQ LG+FKLP FFNYPPYFT+Q V+DTRE+QVQLWKELI+DYC+T KIF+I LE++F LF
Sbjct: 1   MQNLGDFKLPHFFNYPPYFTMQPVRDTREKQVQLWKELIIDYCKTQKIFVIELEQEFPLF 60

Query: 517 TNPLIQRSLTHEAKEVFLSALVSEGRAEWIDKGHKKCLILWLRIQDWADCILRFVKDNGL 338
           +NP+I+RSL+HEA+E FLSALVSEGRAEW+DKGH+KCLILW RIQDWAD ILRFVKDNGL
Sbjct: 61  SNPVIERSLSHEAREAFLSALVSEGRAEWLDKGHRKCLILWHRIQDWADIILRFVKDNGL 120

Query: 337 EDSVMTVEEIRTGIESRGTELHGMDHNVLMRALKLLENKGKAAIFKGTSADDEGVKFSV 161
           ED VMT+EE+R+GIESRGTELHG+D  +LMRALKLLE+KGK AIFKGTSADDEGVKFS+
Sbjct: 121 EDDVMTIEEMRSGIESRGTELHGIDQIILMRALKLLEHKGKLAIFKGTSADDEGVKFSI 179


>gb|EEC71212.1| hypothetical protein OsI_03132 [Oryza sativa Indica Group]
          Length = 179

 Score =  306 bits (784), Expect = 9e-81
 Identities = 146/178 (82%), Positives = 166/178 (93%)
 Frame = -3

Query: 697 MQKLGEFKLPPFFNYPPYFTLQAVKDTRERQVQLWKELILDYCRTHKIFLIPLEEDFLLF 518
           MQ+LG+F+LPPFFNYPPYFTLQ V++TRE+QVQLWK+LILDYCR+ K+++I LEEDF LF
Sbjct: 1   MQRLGDFRLPPFFNYPPYFTLQPVRETREKQVQLWKDLILDYCRSQKLYIISLEEDFPLF 60

Query: 517 TNPLIQRSLTHEAKEVFLSALVSEGRAEWIDKGHKKCLILWLRIQDWADCILRFVKDNGL 338
           +NP I+RSL+HEAKEVFL+ALV EGRAEW+DKGHKKCLILWLRIQDWA+ IL FVKDNGL
Sbjct: 61  SNPKIERSLSHEAKEVFLAALVYEGRAEWMDKGHKKCLILWLRIQDWANYILNFVKDNGL 120

Query: 337 EDSVMTVEEIRTGIESRGTELHGMDHNVLMRALKLLENKGKAAIFKGTSADDEGVKFS 164
           EDSVMTVEEIR+GIE+RGTEL G+D  VLMRALKLLE KGKAAIFKGTSADDEGVKFS
Sbjct: 121 EDSVMTVEEIRSGIETRGTELAGIDRGVLMRALKLLEQKGKAAIFKGTSADDEGVKFS 178


>ref|XP_002326750.1| predicted protein [Populus trichocarpa] gi|222834072|gb|EEE72549.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  305 bits (780), Expect = 3e-80
 Identities = 145/179 (81%), Positives = 164/179 (91%)
 Frame = -3

Query: 697 MQKLGEFKLPPFFNYPPYFTLQAVKDTRERQVQLWKELILDYCRTHKIFLIPLEEDFLLF 518
           MQKLG+FKLP FFNYPPYFTLQ V+DTRE+QVQLWKELILDYCRT KIF+I LEE+F LF
Sbjct: 1   MQKLGDFKLPQFFNYPPYFTLQPVRDTREKQVQLWKELILDYCRTQKIFVIGLEEEFPLF 60

Query: 517 TNPLIQRSLTHEAKEVFLSALVSEGRAEWIDKGHKKCLILWLRIQDWADCILRFVKDNGL 338
           +N LI+RSL++EA+E FLSALVSEGRAEW+D+GH+KCLILW RIQDWAD +L FV+DNG 
Sbjct: 61  SNHLIERSLSNEAREAFLSALVSEGRAEWLDRGHRKCLILWHRIQDWADILLHFVRDNGF 120

Query: 337 EDSVMTVEEIRTGIESRGTELHGMDHNVLMRALKLLENKGKAAIFKGTSADDEGVKFSV 161
           EDSVMTVEEIRTG+ESRGTELHG+D  +LMRALKLLE+KGK AIFKGTS DDEGVKFSV
Sbjct: 121 EDSVMTVEEIRTGVESRGTELHGIDRTILMRALKLLEHKGKLAIFKGTSTDDEGVKFSV 179


Top