BLASTX nr result

ID: Coptis23_contig00002024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002024
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16831.3| unnamed protein product [Vitis vinifera]              224   3e-56
ref|XP_002282097.1| PREDICTED: protein SDA1 homolog [Vitis vinif...   224   3e-56
emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]   223   8e-56
ref|XP_004167589.1| PREDICTED: LOW QUALITY PROTEIN: protein SDA1...   216   6e-54
ref|XP_004148792.1| PREDICTED: protein SDA1 homolog [Cucumis sat...   216   8e-54

>emb|CBI16831.3| unnamed protein product [Vitis vinifera]
          Length = 736

 Score =  224 bits (571), Expect = 3e-56
 Identities = 119/184 (64%), Positives = 138/184 (75%), Gaps = 3/184 (1%)
 Frame = +2

Query: 314  RKRKFVGDEGQLIAADTSLRALKRL-GVKVKQSA--ATDGFLSNEDFQRIKQXXXXXXXX 484
            RKRK +  EGQL AADTSLRALKRL G K+  +   +TDG LSNEDFQRIK         
Sbjct: 553  RKRKALDFEGQLNAADTSLRALKRLAGAKMGHAPLDSTDGILSNEDFQRIKDLKAKEEAK 612

Query: 485  XXXSQHGLIRKGSDAKPVAFKIPNAEQLSVKRVDPAKLELNIKRKMSKEERLALIKAGRE 664
               +QHGL+RKGSDAK   FKIP ++QLSVKRVDPA LE+NI++K+SKEERL L++AGRE
Sbjct: 613  FALAQHGLLRKGSDAKSTGFKIPTSDQLSVKRVDPAMLEVNIRKKLSKEERLELVRAGRE 672

Query: 665  DRGKYQSRTAVKQKKTGGLSNRQKEHKKQMPLVAKRKKVARSXXXXXXXXXXAGTQFRGK 844
            DRGKYQ+R AVKQKKTGGLSNRQKEHKK MPL AKR K+ +S          +G QFRG+
Sbjct: 673  DRGKYQARAAVKQKKTGGLSNRQKEHKKAMPLAAKRSKIQKSREVKRKQQRRSGKQFRGR 732

Query: 845  KAWK 856
            KAWK
Sbjct: 733  KAWK 736


>ref|XP_002282097.1| PREDICTED: protein SDA1 homolog [Vitis vinifera]
          Length = 843

 Score =  224 bits (571), Expect = 3e-56
 Identities = 119/184 (64%), Positives = 138/184 (75%), Gaps = 3/184 (1%)
 Frame = +2

Query: 314  RKRKFVGDEGQLIAADTSLRALKRL-GVKVKQSA--ATDGFLSNEDFQRIKQXXXXXXXX 484
            RKRK +  EGQL AADTSLRALKRL G K+  +   +TDG LSNEDFQRIK         
Sbjct: 660  RKRKALDFEGQLNAADTSLRALKRLAGAKMGHAPLDSTDGILSNEDFQRIKDLKAKEEAK 719

Query: 485  XXXSQHGLIRKGSDAKPVAFKIPNAEQLSVKRVDPAKLELNIKRKMSKEERLALIKAGRE 664
               +QHGL+RKGSDAK   FKIP ++QLSVKRVDPA LE+NI++K+SKEERL L++AGRE
Sbjct: 720  FALAQHGLLRKGSDAKSTGFKIPTSDQLSVKRVDPAMLEVNIRKKLSKEERLELVRAGRE 779

Query: 665  DRGKYQSRTAVKQKKTGGLSNRQKEHKKQMPLVAKRKKVARSXXXXXXXXXXAGTQFRGK 844
            DRGKYQ+R AVKQKKTGGLSNRQKEHKK MPL AKR K+ +S          +G QFRG+
Sbjct: 780  DRGKYQARAAVKQKKTGGLSNRQKEHKKAMPLAAKRSKIQKSREVKRKQQRRSGKQFRGR 839

Query: 845  KAWK 856
            KAWK
Sbjct: 840  KAWK 843


>emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]
          Length = 1703

 Score =  223 bits (567), Expect = 8e-56
 Identities = 119/184 (64%), Positives = 136/184 (73%), Gaps = 3/184 (1%)
 Frame = +2

Query: 314  RKRKFVGDEGQLIAADTSLRALKRL-GVKVKQSAA--TDGFLSNEDFQRIKQXXXXXXXX 484
            RKRK +  EGQL AADTSLRALKRL G K+       TDG LSNEDFQRIK         
Sbjct: 1520 RKRKALDFEGQLNAADTSLRALKRLAGAKMGHXPLDXTDGILSNEDFQRIKDLKAKEEAK 1579

Query: 485  XXXSQHGLIRKGSDAKPVAFKIPNAEQLSVKRVDPAKLELNIKRKMSKEERLALIKAGRE 664
               +QHGL+RKGSDAK   FKIP ++QLSVKRVDPA LE+NI++K+SKEERL L++AGRE
Sbjct: 1580 FALAQHGLLRKGSDAKSTGFKIPTSDQLSVKRVDPAMLEVNIRKKLSKEERLELVRAGRE 1639

Query: 665  DRGKYQSRTAVKQKKTGGLSNRQKEHKKQMPLVAKRKKVARSXXXXXXXXXXAGTQFRGK 844
            DRGKYQ+R AVKQKKTGGLSNRQKEHKK MPL AKR K+ +S          +G QFRG+
Sbjct: 1640 DRGKYQARAAVKQKKTGGLSNRQKEHKKAMPLAAKRSKIQKSREVKRKQQRRSGKQFRGR 1699

Query: 845  KAWK 856
            KAWK
Sbjct: 1700 KAWK 1703


>ref|XP_004167589.1| PREDICTED: LOW QUALITY PROTEIN: protein SDA1 homolog [Cucumis
            sativus]
          Length = 808

 Score =  216 bits (551), Expect = 6e-54
 Identities = 113/183 (61%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
 Frame = +2

Query: 314  RKRKFVGDEGQLIAADTSLRALKRLGVKV--KQSAATDGFLSNEDFQRIKQXXXXXXXXX 487
            +KRK    + QL+ AD+SLRALKRL      K S  TDG LSNEDFQRIK          
Sbjct: 625  KKRKHCDFDQQLVTADSSLRALKRLASTAVEKSSDPTDGILSNEDFQRIKDLKAKKDAKS 684

Query: 488  XXSQHGLIRKGSDAKPVAFKIPNAEQLSVKRVDPAKLELNIKRKMSKEERLALIKAGRED 667
              +QHGL+R GSDAK  A K+PN ++LS KRVDPAKLE++I+R+++KEE+LAL+KAGRE+
Sbjct: 685  ALAQHGLLRNGSDAKRTASKVPNTDELSXKRVDPAKLEVHIRRRVTKEEKLALVKAGREE 744

Query: 668  RGKYQSRTAVKQKKTGGLSNRQKEHKKQMPLVAKRKKVARSXXXXXXXXXXAGTQFRGKK 847
            RGKYQ+R AVKQKKTGGLSNRQKEHKK MPL AKR KVA+S          +G QFRGKK
Sbjct: 745  RGKYQARAAVKQKKTGGLSNRQKEHKKAMPLAAKRSKVAKSRLDKKKKNQRSGKQFRGKK 804

Query: 848  AWK 856
            AWK
Sbjct: 805  AWK 807


>ref|XP_004148792.1| PREDICTED: protein SDA1 homolog [Cucumis sativus]
          Length = 824

 Score =  216 bits (550), Expect = 8e-54
 Identities = 113/183 (61%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
 Frame = +2

Query: 314  RKRKFVGDEGQLIAADTSLRALKRLGVKV--KQSAATDGFLSNEDFQRIKQXXXXXXXXX 487
            +KRK    + QL+ AD+SLRALKRL      K S  TDG LSNEDFQRIK          
Sbjct: 641  KKRKHCDFDQQLVTADSSLRALKRLASTAVEKSSDPTDGILSNEDFQRIKDLKAKKDAKS 700

Query: 488  XXSQHGLIRKGSDAKPVAFKIPNAEQLSVKRVDPAKLELNIKRKMSKEERLALIKAGRED 667
              +QHGL+R GSDAK  A K+PN ++LS KRVDPAKLE++I+R+++KEE+LAL+KAGRE+
Sbjct: 701  ALAQHGLLRNGSDAKRTASKVPNTDELSKKRVDPAKLEVHIRRRVTKEEKLALVKAGREE 760

Query: 668  RGKYQSRTAVKQKKTGGLSNRQKEHKKQMPLVAKRKKVARSXXXXXXXXXXAGTQFRGKK 847
            RGKYQ+R AVKQKKTGGLSNRQKEHKK MPL AKR KVA+S          +G QFRGKK
Sbjct: 761  RGKYQARAAVKQKKTGGLSNRQKEHKKAMPLAAKRSKVAKSRLDKKKKNQRSGKQFRGKK 820

Query: 848  AWK 856
            AWK
Sbjct: 821  AWK 823


Top