BLASTX nr result

ID: Coptis23_contig00002023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002023
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325725.1| BED finger-nbs-lrr resistance protein [Popul...    60   2e-07
ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CBI20163.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...    59   5e-07
ref|XP_002332783.1| nbs-lrr resistance protein [Populus trichoca...    58   9e-07

>ref|XP_002325725.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862600|gb|EEF00107.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 693

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/53 (58%), Positives = 37/53 (69%)
 Frame = -3

Query: 161 LKHVASGFFVHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCVELVRVP 3
           L+ +A  FF H+  L VLDLS+T IE LPDSVSDL++L  LLLI C  L  VP
Sbjct: 479 LRFIADSFFKHLLGLKVLDLSYTFIEKLPDSVSDLISLTTLLLIGCENLRDVP 531


>ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|222834655|gb|EEE73118.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = -3

Query: 173 QRGPLKHVASGFFVHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCVELVRVP 3
           +   LK +A  FF  ++ L VLDLS+T+I  LPDSVS+LVNL  LLLI C  L  VP
Sbjct: 248 ENSELKFIADSFFEQLRGLKVLDLSYTNITKLPDSVSELVNLTALLLIGCHMLRHVP 304


>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = -3

Query: 182 SHRQRGPLKHVASGFFVHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCVELVRV 6
           S+  +G  + + + FFVHM SL VLDLS T+I  LPDS+ D+VNLR L+L  C EL +V
Sbjct: 534 SYPPKGLHEGLPNSFFVHMLSLRVLDLSCTNIALLPDSIYDMVNLRALILCECRELKQV 592


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = -3

Query: 182 SHRQRGPLKHVASGFFVHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCVELVRV 6
           S+  +G  + + + FFVHM SL VLDLS T+I  LPDS+ D+VNLR L+L  C EL +V
Sbjct: 534 SYPPKGLHEGLPNSFFVHMLSLRVLDLSCTNIALLPDSIYDMVNLRALILCECRELKQV 592


>ref|XP_002332783.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833192|gb|EEE71669.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1062

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = -3

Query: 167 GPLKHVASGFFVHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCVELVRVP 3
           G L+ +   FF  +  L VL+LS T IE+LPDSVSDLV+L  LLL YC  L  VP
Sbjct: 633 GGLRFIGDSFFKQLHGLKVLNLSGTGIENLPDSVSDLVSLTALLLSYCYNLRHVP 687


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