BLASTX nr result

ID: Coptis23_contig00002021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002021
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332539.1| BED finger-nbs-lrr resistance protein [Popul...    77   1e-12
ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Popul...    76   3e-12
ref|XP_002332019.1| BED finger-nbs-lrr resistance protein [Popul...    76   3e-12
ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichoca...    75   6e-12
ref|XP_002317526.1| BED finger-nbs resistance protein [Populus t...    74   1e-11

>ref|XP_002332539.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832683|gb|EEE71160.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 875

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/74 (58%), Positives = 51/74 (68%)
 Frame = -2

Query: 222 CPKLLTLIFAQKYYPGLKHVAPGFFMHMNSLTVLDLSRTPIESLPDSVSDLVNLRGLLLI 43
           CP L TL     Y  GL+ VA  FF  ++ L VLDLSRT I++LPDSVSDLV+L  LLL 
Sbjct: 699 CPNLSTLFLC--YNRGLRFVADSFFKQLHGLMVLDLSRTGIKNLPDSVSDLVSLIALLLK 756

Query: 42  DCQKLVRVPSLSKL 1
           +C+KL  VPSL KL
Sbjct: 757 ECEKLRHVPSLKKL 770


>ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862181|gb|EEE99687.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1570

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/74 (56%), Positives = 49/74 (66%)
 Frame = -2

Query: 222 CPKLLTLIFAQKYYPGLKHVAPGFFMHMNSLTVLDLSRTPIESLPDSVSDLVNLRGLLLI 43
           CP L TL+    +   L+ +A  FF  M+ L VLDLS T IE LPDSVSDLV L  LLL 
Sbjct: 601 CPNLSTLLLCSNHR--LRFIAGSFFEQMHGLKVLDLSNTAIECLPDSVSDLVGLTSLLLN 658

Query: 42  DCQKLVRVPSLSKL 1
           +CQ+L RVPSL KL
Sbjct: 659 NCQRLSRVPSLKKL 672


>ref|XP_002332019.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222875244|gb|EEF12375.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 909

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/74 (55%), Positives = 49/74 (66%)
 Frame = -2

Query: 222 CPKLLTLIFAQKYYPGLKHVAPGFFMHMNSLTVLDLSRTPIESLPDSVSDLVNLRGLLLI 43
           CP L TL        GL+ VA  FF  +N L VLDLSRT IE+LPDS+SDLV+L  LL+ 
Sbjct: 619 CPNLSTLFLCDNR--GLRFVADSFFKQLNGLMVLDLSRTGIENLPDSISDLVSLTALLIK 676

Query: 42  DCQKLVRVPSLSKL 1
           +C+ L  VPSL KL
Sbjct: 677 NCKNLRHVPSLKKL 690


>ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862190|gb|EEE99696.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1199

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = -2

Query: 222 CPKLLTLIFAQKYYPGLKHVAPGFFMHMNSLTVLDLSRTPIESLPDSVSDLVNLRGLLLI 43
           CP L TL+  Q  +  L+ +A  FF  +N L VLDLS T IE+LPDSVSDLV+L  LLL 
Sbjct: 768 CPYLSTLLLCQNRW--LQFIADSFFKQLNGLKVLDLSSTEIENLPDSVSDLVSLTALLLN 825

Query: 42  DCQKLVRVPSLSKL 1
           +C+ L  VPSL KL
Sbjct: 826 NCENLRHVPSLKKL 839


>ref|XP_002317526.1| BED finger-nbs resistance protein [Populus trichocarpa]
           gi|222860591|gb|EEE98138.1| BED finger-nbs resistance
           protein [Populus trichocarpa]
          Length = 595

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/74 (55%), Positives = 47/74 (63%)
 Frame = -2

Query: 222 CPKLLTLIFAQKYYPGLKHVAPGFFMHMNSLTVLDLSRTPIESLPDSVSDLVNLRGLLLI 43
           CP L TL+    Y   L+ +A  FF H+N L VLDLS T IE LPDS SDL NL  LLL 
Sbjct: 497 CPNLSTLLLPYNYT--LRFIAYSFFKHLNKLKVLDLSETNIELLPDSFSDLENLSALLLK 554

Query: 42  DCQKLVRVPSLSKL 1
            C++L  VPSL KL
Sbjct: 555 GCEQLRHVPSLKKL 568


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