BLASTX nr result

ID: Coptis23_contig00002020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002020
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   152   8e-35
ref|XP_003539578.1| PREDICTED: probable disease resistance prote...   151   2e-34
ref|XP_002332019.1| BED finger-nbs-lrr resistance protein [Popul...   150   4e-34
ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...   150   4e-34
gb|ABF81453.1| NBS-LRR type disease resistance protein [Populus ...   149   7e-34

>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1016

 Score =  152 bits (385), Expect = 8e-35
 Identities = 110/316 (34%), Positives = 168/316 (53%), Gaps = 8/316 (2%)
 Frame = -1

Query: 932  KFMVRTGLSSTEIPHEDDWSEDLERVSFMESDIEDISIIPKCPKLSTLILSQGKTLF--Q 759
            +FMV+T  +  ++P+E +WS ++ERVS M+S +  +  +P CPKLSTL L + K  +  +
Sbjct: 479  RFMVKTRRNLEDLPNEIEWSNNVERVSLMDSHLSTLMFVPNCPKLSTLFLQKPKFSYPPK 538

Query: 758  GALKHVAPGFFMHMNSLTVLDLSGTLIESLPDSVSDLVNLRGLLLIDCKKLVRVPSLSKL 579
            G  + +   FF+HM SL VLDLS T I  LPDS+ D+VNLR L+L +C++L +V SL+KL
Sbjct: 539  GLHEGLPNSFFVHMLSLRVLDLSCTNIALLPDSIYDMVNLRALILCECRELKQVGSLAKL 598

Query: 578  QSLRVLKLTYSAIEELPHGMEMLVNLRSLDLSYNYKLKEMIPTGLISKFSLLQELI-LQG 402
            + LR L L+++ +E +P+G+E LV L+       +  + ++P  L     LL  L+ LQ 
Sbjct: 599  KELRELDLSWNEMETIPNGIEELVLLKHFSWISYHSRQTILPNPL---SKLLPNLLQLQC 655

Query: 401  IEPENLSRGSTQLENLSSLTQLENLHIEFDELSNF-AYGEFGNFERLKKYYI--GPDEYS 231
            +  +        +E LS L +LE L + F  L NF +Y +  ++ RL  Y +     EYS
Sbjct: 656  LRHDGEKFLDVGVEELSGLRKLEVLDVNFSSLHNFNSYMKTQHYRRLTHYRVRLSGREYS 715

Query: 230  IQFKMSRQEAYFGRS-EYARSLFLSNSKGIPCNALSLPKRIQYLRIGEFNQITRLSEL-P 57
                  R    F +  E          K      L LP  +Q+L+I   N  T L ++ P
Sbjct: 716  RLLGSQRNRHGFCKEVEVWECKLTEGGKDNDDYQLVLPTNVQFLQIYTCNDPTSLLDVSP 775

Query: 56   LNDSQQDLRELRIYSC 9
                  DL+   I  C
Sbjct: 776  SLKIATDLKACLISKC 791


>ref|XP_003539578.1| PREDICTED: probable disease resistance protein At4g27220-like
            [Glycine max]
          Length = 962

 Score =  151 bits (382), Expect = 2e-34
 Identities = 115/318 (36%), Positives = 169/318 (53%), Gaps = 10/318 (3%)
 Frame = -1

Query: 929  FMVRTGLSSTEIPHEDDWSEDLERVSFMESDIEDI--SIIPKCPKLSTLILSQGKTLFQG 756
            F+V+ GL  TEIP E +W+EDLE+VS M + I +I   I P+CPKL TLIL   ++L   
Sbjct: 487  FLVKAGLQLTEIPDEVEWNEDLEKVSLMCNWIHEIPTGISPRCPKLRTLILKHNESLTS- 545

Query: 755  ALKHVAPGFFMHMNSLTVLDLSGTLIESLPDSVSDLVNLRGLLLIDCKKLVRVPSLSKLQ 576
                ++  FF+HM+SL VLDLS T IE LP SV+DL  L  LLL  CK+L  +PSL+KLQ
Sbjct: 546  ----ISDSFFVHMSSLQVLDLSFTDIEVLPKSVADLNTLTALLLTSCKRLKHMPSLAKLQ 601

Query: 575  SLRVLKLTYSAIEELPHGMEMLVNLRSLDLSYNYKLKEMIPTGL-ISKFSLLQELILQGI 399
            +L  L L+++AI E+P  +E LVNL+ L    N   K ++ TG  I+K   LQ LIL   
Sbjct: 602  TLIRLDLSFTAITEIPQDLETLVNLKWL----NLYAKNLVSTGKEIAKLIHLQFLILHWW 657

Query: 398  EPENLSRGSTQLENLSSLTQLENLHIEFDELSNF-AYGEFGNFERLKKYYIGPDEYSIQF 222
                  +   ++E++S L +LE        + +F AY      + + +Y  GP  Y +Q 
Sbjct: 658  S----RKIKVKVEHISCLGKLETFAGNLYNMQHFNAY-----VKTMHEY--GPRSYLLQL 706

Query: 221  KMSRQEA-----YFGRSEYARSLFLSNSK-GIPCNALSLPKRIQYLRIGEFNQITRLSEL 60
                        +F    +++ + +SN K       L LP  IQ L++   + I  L ++
Sbjct: 707  DSEESPGKSPWYFFAEVCFSKDVIISNCKIRTGVTPLMLPSDIQRLKVERCHDIRSLCDI 766

Query: 59   PLNDSQQDLRELRIYSCN 6
                +   L+   I  C+
Sbjct: 767  LSLKNATSLKRCEIADCD 784


>ref|XP_002332019.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222875244|gb|EEF12375.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 909

 Score =  150 bits (379), Expect = 4e-34
 Identities = 93/213 (43%), Positives = 129/213 (60%), Gaps = 3/213 (1%)
 Frame = -1

Query: 926  MVRTGLSSTEIPHEDDWSEDLERVSFMESDIEDI--SIIPKCPKLSTLILSQGKTLFQGA 753
            MV+ G    E+P  ++W E+L RVS ME++IE+I  S  P CP LSTL L   +      
Sbjct: 578  MVKAGAQLKELPDAEEWMENLRRVSLMENEIEEIPSSHSPMCPNLSTLFLCDNR-----G 632

Query: 752  LKHVAPGFFMHMNSLTVLDLSGTLIESLPDSVSDLVNLRGLLLIDCKKLVRVPSLSKLQS 573
            L+ VA  FF  +N L VLDLS T IE+LPDS+SDLV+L  LL+ +CK L  VPSL KL++
Sbjct: 633  LRFVADSFFKQLNGLMVLDLSRTGIENLPDSISDLVSLTALLIKNCKNLRHVPSLKKLRA 692

Query: 572  LRVLKLTYSAIEELPHGMEMLVNLRSLDLSYNYKLKEMIPTGLISKFSLLQELILQGIEP 393
            L+ L L+ +A+E++P GME L NLR L +S   + K   P+G++ K S LQ  +L     
Sbjct: 693  LKRLDLSSTALEKMPQGMECLTNLRFLRMSGCGEKK--FPSGILPKLSHLQVFVLHEFSI 750

Query: 392  ENLSRGSTQLEN-LSSLTQLENLHIEFDELSNF 297
            + +    T   N + SL  LE+L   F+  S+F
Sbjct: 751  DAIYAPITVKGNEVGSLRNLESLECHFEGFSDF 783


>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 958

 Score =  150 bits (379), Expect = 4e-34
 Identities = 99/222 (44%), Positives = 130/222 (58%), Gaps = 2/222 (0%)
 Frame = -1

Query: 899  EIPHEDDWSEDLERVSFMESDIEDI--SIIPKCPKLSTLILSQGKTLFQGALKHVAPGFF 726
            E+P +D+W EDL RVS ME+ +++I  S  P CPKLSTL L+    L     + +A  FF
Sbjct: 454  ELPGKDEWKEDLVRVSLMENRLKEIPSSCSPMCPKLSTLFLNSNIEL-----EMIADSFF 508

Query: 725  MHMNSLTVLDLSGTLIESLPDSVSDLVNLRGLLLIDCKKLVRVPSLSKLQSLRVLKLTYS 546
             H+  L VL+LS T I  LP S SDLVNL  L L  C+KL  +PSL+KL+ LR L L Y+
Sbjct: 509  KHLQGLKVLNLSSTAIPKLPGSFSDLVNLTALYLRRCEKLRHIPSLAKLRELRKLDLRYT 568

Query: 545  AIEELPHGMEMLVNLRSLDLSYNYKLKEMIPTGLISKFSLLQELILQGIEPENLSRGSTQ 366
            A+EELP GMEML NLR L+L  N  LKE +P G++   S L+ L    I  E     + +
Sbjct: 569  ALEELPQGMEMLSNLRYLNLHGN-NLKE-LPAGILPNLSCLKFL---SINREMGFFKTER 623

Query: 365  LENLSSLTQLENLHIEFDELSNFAYGEFGNFERLKKYYIGPD 240
            +E ++ L  LE L  +F +LS+F           KKY   PD
Sbjct: 624  VEEMACLKSLETLRYQFCDLSDF-----------KKYLKSPD 654


>gb|ABF81453.1| NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1324

 Score =  149 bits (377), Expect = 7e-34
 Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
 Frame = -1

Query: 926  MVRTGLSSTEIPHEDDWSEDLERVSFMESDIEDI--SIIPKCPKLSTLILSQGKTLFQGA 753
            MV+ G    E+P  ++W+E+L RVS M++ I+ I  S  P+CP LSTL+L Q + L    
Sbjct: 671  MVKAGAQLKELPDAEEWTENLTRVSLMQNQIKAIPSSHSPRCPYLSTLLLCQNRLL---- 726

Query: 752  LKHVAPGFFMHMNSLTVLDLSGTLIESLPDSVSDLVNLRGLLLIDCKKLVRVPSLSKLQS 573
               +A  FF  ++ L VLDL+ T IE L DS+SDL++L  LLL +CKKL  VPSL KL++
Sbjct: 727  -GFIADSFFKQLHGLKVLDLTWTGIEKLSDSISDLLSLTTLLLNNCKKLRHVPSLKKLRA 785

Query: 572  LRVLKLTYSAIEELPHGMEMLVNLRSLDLSYNYKLKEMIPTGLISKFSLLQELILQGIEP 393
            L+ L L+++A+E++P GME L NLR L +  N   ++  P+G++ K S LQ  +L+    
Sbjct: 786  LKRLDLSHTALEKMPQGMECLTNLRYLRM--NGCGEKEFPSGILPKLSHLQVFVLEECFV 843

Query: 392  ENLSRGSTQLENLSSLTQLENLHIEFDELSNFA 294
            ++  R + +++ + SL  LE L   F  LS+FA
Sbjct: 844  DSYRRITVEVKEVGSLRNLETLRCHFKGLSDFA 876


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