BLASTX nr result

ID: Coptis23_contig00002014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002014
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72155.1| hypothetical protein VITISV_019018 [Vitis vinifera]    65   7e-09
gb|ACN27362.1| unknown [Zea mays] gi|413942003|gb|AFW74652.1| hy...    64   1e-08
ref|NP_001144179.1| uncharacterized protein LOC100277036 [Zea ma...    64   1e-08
ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera] gi...    64   1e-08
ref|NP_001066868.1| Os12g0511300 [Oryza sativa Japonica Group] g...    64   1e-08

>emb|CAN72155.1| hypothetical protein VITISV_019018 [Vitis vinifera]
          Length = 478

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/63 (52%), Positives = 44/63 (69%)
 Frame = +1

Query: 1   ISSAVIASLAATLAVPIAIYVLALPLPYXXXXXXXXXXXXXXXVILVLGLILYNLPQFSR 180
           ISSAV+++LAA  +VPI+IYVL+LPLPY               VIL+LGL+LYN+PQ ++
Sbjct: 416 ISSAVVSTLAAMASVPISIYVLSLPLPYLPQGASLSPFFLFGGVILLLGLLLYNIPQPAK 475

Query: 181 QDP 189
           Q P
Sbjct: 476 QXP 478


>gb|ACN27362.1| unknown [Zea mays] gi|413942003|gb|AFW74652.1| hypothetical protein
           ZEAMMB73_664224 [Zea mays]
          Length = 344

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = +1

Query: 1   ISSAVIASLAATLAVPIAIYVLALPLPYXXXXXXXXXXXXXXXVILVLGLILYNLPQFS 177
           +SSA++ASL AT AVPI+IY+L+LPLPY               VIL++GLILYNLPQ S
Sbjct: 279 MSSAIVASLTATSAVPISIYILSLPLPYIPHGTELSTSFIIGAVILLMGLILYNLPQSS 337


>ref|NP_001144179.1| uncharacterized protein LOC100277036 [Zea mays]
           gi|195638058|gb|ACG38497.1| hypothetical protein [Zea
           mays]
          Length = 344

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = +1

Query: 1   ISSAVIASLAATLAVPIAIYVLALPLPYXXXXXXXXXXXXXXXVILVLGLILYNLPQFS 177
           +SSA++ASL AT AVPI+IY+L+LPLPY               VIL++GLILYNLPQ S
Sbjct: 279 MSSAIVASLTATSAVPISIYILSLPLPYIPHGTELSTSFIIGAVILLMGLILYNLPQSS 337


>ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera]
           gi|302142085|emb|CBI19288.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/63 (52%), Positives = 44/63 (69%)
 Frame = +1

Query: 1   ISSAVIASLAATLAVPIAIYVLALPLPYXXXXXXXXXXXXXXXVILVLGLILYNLPQFSR 180
           ISSAV+++LAA  +VPI+IYVL+LPLPY               VIL+LGL+LYN+PQ ++
Sbjct: 360 ISSAVVSTLAAMASVPISIYVLSLPLPYLPQGASLSPFFLFGGVILLLGLLLYNIPQPAK 419

Query: 181 QDP 189
           Q P
Sbjct: 420 QAP 422


>ref|NP_001066868.1| Os12g0511300 [Oryza sativa Japonica Group]
           gi|77556248|gb|ABA99044.1| expressed protein [Oryza
           sativa Japonica Group] gi|113649375|dbj|BAF29887.1|
           Os12g0511300 [Oryza sativa Japonica Group]
           gi|215766721|dbj|BAG98949.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222617164|gb|EEE53296.1| hypothetical protein
           OsJ_36259 [Oryza sativa Japonica Group]
          Length = 343

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/61 (50%), Positives = 43/61 (70%)
 Frame = +1

Query: 1   ISSAVIASLAATLAVPIAIYVLALPLPYXXXXXXXXXXXXXXXVILVLGLILYNLPQFSR 180
           +SSA++ASL AT AVPI+IY+L+LPLPY               V+L++GLI+YNLPQ S+
Sbjct: 278 LSSALVASLTATSAVPISIYILSLPLPYIPHGAELSSSFILGGVVLLMGLIIYNLPQSSK 337

Query: 181 Q 183
           +
Sbjct: 338 K 338


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