BLASTX nr result

ID: Coptis23_contig00002011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002011
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62383.1| hypothetical protein VITISV_028023 [Vitis vinifera]   585   e-164
ref|XP_002276013.1| PREDICTED: cysteine synthase, chloroplastic/...   585   e-164
ref|XP_003633951.1| PREDICTED: cysteine synthase, chloroplastic/...   575   e-161
ref|XP_003631922.1| PREDICTED: LOW QUALITY PROTEIN: cysteine syn...   572   e-161
gb|AFK37031.1| unknown [Lotus japonicus]                              571   e-160

>emb|CAN62383.1| hypothetical protein VITISV_028023 [Vitis vinifera]
          Length = 371

 Score =  585 bits (1508), Expect = e-164
 Identities = 300/371 (80%), Positives = 326/371 (87%), Gaps = 9/371 (2%)
 Frame = +1

Query: 82   MARLLSFSKKGSKI-CNSLLQKGQFS--------SFVQKVRDLPKDLPGINVKKDVSQLI 234
            MA L SF K+ S I   SL  +  FS        SF Q++RDLPKDLPG N+KK+VSQLI
Sbjct: 1    MAALSSFFKRKSSIPFTSLAIRRWFSTQPILDSPSFSQRIRDLPKDLPGTNIKKEVSQLI 60

Query: 235  GKTPLVYLNKVTEGCGAYIAVKQEMMQPTASVKDRPALAMILDAEKKQLITPGKTMLIEP 414
            GKTPLV+LNKVTEGCGAY+AVKQEMMQPTAS+KDRPALAMI DAE KQLITPGKT+LIEP
Sbjct: 61   GKTPLVFLNKVTEGCGAYVAVKQEMMQPTASIKDRPALAMITDAEBKQLITPGKTVLIEP 120

Query: 415  TSGNMGISMAFVAAMRGYKITLTMPSYTSLERRVTMKAFGANLILTDPNKGMGGTVKKAY 594
            TSGNMGISMAF+AAM+GYK+ LTMPSYTSLERRVTM+AFGA+LILTDP KGMGGTVKKAY
Sbjct: 121  TSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPTKGMGGTVKKAY 180

Query: 595  DLLESTPDAYMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMXXXXXXXXXXXXQYL 774
            +LLESTPDA+MLQQFSNPANTQVHFETTGPEIWEDT GQVDIF+M            +YL
Sbjct: 181  ELLESTPDAFMLQQFSNPANTQVHFETTGPEIWEDTRGQVDIFIMGIGSGGTVSGVGRYL 240

Query: 775  KSMNPNVKIYGLEPAESNILNGGKPGPHSITGNGVGFKPDILDMDVMEEVLEVTSDDSVK 954
            KS NPNVKIYGLEP ESN+LNGGKPGPH ITGNGVGFKPDILDMDVMEEVL V+S+D+V 
Sbjct: 241  KSQNPNVKIYGLEPTESNVLNGGKPGPHHITGNGVGFKPDILDMDVMEEVLMVSSEDAVN 300

Query: 955  MARELALKEGLLVGISSGANTVAALRLARRPENKGKLIVTIHPSFGERYLSSVLFQELRE 1134
            MAR+LALKEGL+VGISSGANTVAALRLARRPENKGKLIVTIHPSFGERYLSSVLFQELR+
Sbjct: 301  MARQLALKEGLMVGISSGANTVAALRLARRPENKGKLIVTIHPSFGERYLSSVLFQELRK 360

Query: 1135 EAEKMQPVSVD 1167
            EAE MQPVSVD
Sbjct: 361  EAENMQPVSVD 371


>ref|XP_002276013.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic isoform 1
            [Vitis vinifera] gi|297745315|emb|CBI40395.3| unnamed
            protein product [Vitis vinifera]
          Length = 371

 Score =  585 bits (1507), Expect = e-164
 Identities = 300/371 (80%), Positives = 326/371 (87%), Gaps = 9/371 (2%)
 Frame = +1

Query: 82   MARLLSFSKKGSKI-CNSLLQKGQFS--------SFVQKVRDLPKDLPGINVKKDVSQLI 234
            MA L SF K+ S I   SL  +  FS        SF Q++RDLPKDLPG N+KK+VSQLI
Sbjct: 1    MAALSSFFKRKSSIPFTSLAIRRWFSTQPILDSPSFSQRIRDLPKDLPGTNIKKEVSQLI 60

Query: 235  GKTPLVYLNKVTEGCGAYIAVKQEMMQPTASVKDRPALAMILDAEKKQLITPGKTMLIEP 414
            GKTPLV+LNKVTEGCGAY+AVKQEMMQPTAS+KDRPALAMI DAE KQLITPGKT+LIEP
Sbjct: 61   GKTPLVFLNKVTEGCGAYVAVKQEMMQPTASIKDRPALAMITDAEDKQLITPGKTVLIEP 120

Query: 415  TSGNMGISMAFVAAMRGYKITLTMPSYTSLERRVTMKAFGANLILTDPNKGMGGTVKKAY 594
            TSGNMGISMAF+AAM+GYK+ LTMPSYTSLERRVTM+AFGA+LILTDP KGMGGTVKKAY
Sbjct: 121  TSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPTKGMGGTVKKAY 180

Query: 595  DLLESTPDAYMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMXXXXXXXXXXXXQYL 774
            +LLESTPDA+MLQQFSNPANTQVHFETTGPEIWEDT GQVDIF+M            +YL
Sbjct: 181  ELLESTPDAFMLQQFSNPANTQVHFETTGPEIWEDTRGQVDIFIMGIGSGGTVSGVGRYL 240

Query: 775  KSMNPNVKIYGLEPAESNILNGGKPGPHSITGNGVGFKPDILDMDVMEEVLEVTSDDSVK 954
            KS NPNVKIYGLEP ESN+LNGGKPGPH ITGNGVGFKPDILDMDVMEEVL V+S+D+V 
Sbjct: 241  KSQNPNVKIYGLEPTESNVLNGGKPGPHHITGNGVGFKPDILDMDVMEEVLMVSSEDAVN 300

Query: 955  MARELALKEGLLVGISSGANTVAALRLARRPENKGKLIVTIHPSFGERYLSSVLFQELRE 1134
            MAR+LALKEGL+VGISSGANTVAALRLARRPENKGKLIVTIHPSFGERYLSSVLFQELR+
Sbjct: 301  MARQLALKEGLMVGISSGANTVAALRLARRPENKGKLIVTIHPSFGERYLSSVLFQELRK 360

Query: 1135 EAEKMQPVSVD 1167
            EAE MQPVSVD
Sbjct: 361  EAENMQPVSVD 371


>ref|XP_003633951.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic isoform 2
            [Vitis vinifera]
          Length = 389

 Score =  575 bits (1482), Expect = e-161
 Identities = 300/389 (77%), Positives = 327/389 (84%), Gaps = 27/389 (6%)
 Frame = +1

Query: 82   MARLLSFSKKGSKI-CNSLLQKGQFS--------SFVQKVRDLPKDLPGINVKKDVSQLI 234
            MA L SF K+ S I   SL  +  FS        SF Q++RDLPKDLPG N+KK+VSQLI
Sbjct: 1    MAALSSFFKRKSSIPFTSLAIRRWFSTQPILDSPSFSQRIRDLPKDLPGTNIKKEVSQLI 60

Query: 235  GKTPLVYLNKVTEGCGAYIAVKQEMMQPTASVKDRPALAMILDAEKKQLITPGKTMLIEP 414
            GKTPLV+LNKVTEGCGAY+AVKQEMMQPTAS+KDRPALAMI DAE KQLITPGKT+LIEP
Sbjct: 61   GKTPLVFLNKVTEGCGAYVAVKQEMMQPTASIKDRPALAMITDAEDKQLITPGKTVLIEP 120

Query: 415  TSGNMGISMAFVAAMRGYKITLTMPSYTSLERRVTMKAFGANLILTDPNKGMGGTVKKAY 594
            TSGNMGISMAF+AAM+GYK+ LTMPSYTSLERRVTM+AFGA+LILTDP KGMGGTVKKAY
Sbjct: 121  TSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPTKGMGGTVKKAY 180

Query: 595  DLLESTPDAYMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMXXXXXXXXXXXXQYL 774
            +LLESTPDA+MLQQFSNPANTQVHFETTGPEIWEDT GQVDIF+M            +YL
Sbjct: 181  ELLESTPDAFMLQQFSNPANTQVHFETTGPEIWEDTRGQVDIFIMGIGSGGTVSGVGRYL 240

Query: 775  KSMNPNVKIYGLEPAESNILNGGKPGPHSITGNGVGFKPDILDMDVMEEVL--------- 927
            KS NPNVKIYGLEP ESN+LNGGKPGPH ITGNGVGFKPDILDMDVMEEVL         
Sbjct: 241  KSQNPNVKIYGLEPTESNVLNGGKPGPHHITGNGVGFKPDILDMDVMEEVLMLQQSFPIS 300

Query: 928  ---------EVTSDDSVKMARELALKEGLLVGISSGANTVAALRLARRPENKGKLIVTIH 1080
                     +V+S+D+V MAR+LALKEGL+VGISSGANTVAALRLARRPENKGKLIVTIH
Sbjct: 301  LDRVSSFTIQVSSEDAVNMARQLALKEGLMVGISSGANTVAALRLARRPENKGKLIVTIH 360

Query: 1081 PSFGERYLSSVLFQELREEAEKMQPVSVD 1167
            PSFGERYLSSVLFQELR+EAE MQPVSVD
Sbjct: 361  PSFGERYLSSVLFQELRKEAENMQPVSVD 389


>ref|XP_003631922.1| PREDICTED: LOW QUALITY PROTEIN: cysteine synthase,
            chloroplastic/chromoplastic-like [Vitis vinifera]
          Length = 366

 Score =  572 bits (1475), Expect = e-161
 Identities = 290/369 (78%), Positives = 321/369 (86%), Gaps = 7/369 (1%)
 Frame = +1

Query: 82   MARLLSFSKKGSKI-------CNSLLQKGQFSSFVQKVRDLPKDLPGINVKKDVSQLIGK 240
            MA L SF K+ S I          +L+   FS   +++RDLPKDLPG N+KK+VSQLIGK
Sbjct: 1    MAALSSFFKRKSSIPLTRWFSTQPILESPSFS---RRIRDLPKDLPGTNIKKEVSQLIGK 57

Query: 241  TPLVYLNKVTEGCGAYIAVKQEMMQPTASVKDRPALAMILDAEKKQLITPGKTMLIEPTS 420
            TPLV+LNKVTEGCGAY+AVKQEMMQPTAS+KDRPALAM+ DAE K LITPGKT+LIEPTS
Sbjct: 58   TPLVFLNKVTEGCGAYVAVKQEMMQPTASIKDRPALAMMTDAENKHLITPGKTVLIEPTS 117

Query: 421  GNMGISMAFVAAMRGYKITLTMPSYTSLERRVTMKAFGANLILTDPNKGMGGTVKKAYDL 600
            GNMGISMAF+AAM+GYK+ LTMPSYTSLERRVTM+AFGA+LILTDP KGMGGTVKKAY+L
Sbjct: 118  GNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPTKGMGGTVKKAYEL 177

Query: 601  LESTPDAYMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMXXXXXXXXXXXXQYLKS 780
            LESTPDA+MLQQFSNPANTQVHFETTGPEIWEDT GQVD F+M            +YLKS
Sbjct: 178  LESTPDAFMLQQFSNPANTQVHFETTGPEIWEDTNGQVDXFIMGIGSGGTVSGVGRYLKS 237

Query: 781  MNPNVKIYGLEPAESNILNGGKPGPHSITGNGVGFKPDILDMDVMEEVLEVTSDDSVKMA 960
             NPNVKIYGLEP ESN+LNGGKPGPH ITGNGVGFKPDILDMDVMEEVL V+S+D+V MA
Sbjct: 238  QNPNVKIYGLEPTESNVLNGGKPGPHHITGNGVGFKPDILDMDVMEEVLMVSSEDAVNMA 297

Query: 961  RELALKEGLLVGISSGANTVAALRLARRPENKGKLIVTIHPSFGERYLSSVLFQELREEA 1140
            R+LALKEGL+VGISSGANTVAALRLAR PEN+GKLIVT+HPSFGERYLSSVLFQELR+EA
Sbjct: 298  RQLALKEGLMVGISSGANTVAALRLARMPENRGKLIVTVHPSFGERYLSSVLFQELRKEA 357

Query: 1141 EKMQPVSVD 1167
            E MQPVSVD
Sbjct: 358  ENMQPVSVD 366


>gb|AFK37031.1| unknown [Lotus japonicus]
          Length = 374

 Score =  571 bits (1472), Expect = e-160
 Identities = 294/374 (78%), Positives = 320/374 (85%), Gaps = 12/374 (3%)
 Frame = +1

Query: 82   MARLLSFSKKGSK----ICNSLLQKGQFS--------SFVQKVRDLPKDLPGINVKKDVS 225
            MA L SF K+        C+  L +  FS        S  QK+RDLPKDLPG N+KK VS
Sbjct: 1    MASLSSFLKQRPSSYAVACHHTLLRRLFSTATSADSPSLAQKIRDLPKDLPGNNIKKHVS 60

Query: 226  QLIGKTPLVYLNKVTEGCGAYIAVKQEMMQPTASVKDRPALAMILDAEKKQLITPGKTML 405
            +LIG+TPLVYLNKVTEGCGAYIAVKQEMMQPT SVKDRPALAMI DAEKK LITPGKT+L
Sbjct: 61   ELIGRTPLVYLNKVTEGCGAYIAVKQEMMQPTTSVKDRPALAMIADAEKKNLITPGKTIL 120

Query: 406  IEPTSGNMGISMAFVAAMRGYKITLTMPSYTSLERRVTMKAFGANLILTDPNKGMGGTVK 585
            IEPTSGNMGISMAF+ A++GYK+ LTMPSYTS+ERRVTM+AFGA LILTDP KGMGGTVK
Sbjct: 121  IEPTSGNMGISMAFIGALKGYKVVLTMPSYTSMERRVTMRAFGAELILTDPAKGMGGTVK 180

Query: 586  KAYDLLESTPDAYMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMXXXXXXXXXXXX 765
            KAYDLLESTP+A+MLQQFSNPANTQVHFETTGPEIWEDT GQVDIFVM            
Sbjct: 181  KAYDLLESTPNAFMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVG 240

Query: 766  QYLKSMNPNVKIYGLEPAESNILNGGKPGPHSITGNGVGFKPDILDMDVMEEVLEVTSDD 945
            QYLKS NPNVKIYG+EP+ESN+LNGGKPGPH ITGNGVGFKPDILDMDVM++VLEV+S+D
Sbjct: 241  QYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDMDVMDKVLEVSSED 300

Query: 946  SVKMARELALKEGLLVGISSGANTVAALRLARRPENKGKLIVTIHPSFGERYLSSVLFQE 1125
            +VKMAR LALKEGL+VGISSGANTVAALRLA  PENKGKLIVTIHPSFGERYL SVLFQE
Sbjct: 301  AVKMARILALKEGLMVGISSGANTVAALRLASLPENKGKLIVTIHPSFGERYLPSVLFQE 360

Query: 1126 LREEAEKMQPVSVD 1167
            LR+EAEKMQPVSVD
Sbjct: 361  LRDEAEKMQPVSVD 374


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