BLASTX nr result
ID: Coptis23_contig00002000
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002000
(1013 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002314844.1| predicted protein [Populus trichocarpa] gi|2... 273 6e-88
ref|XP_002527020.1| receptor serine/threonine kinase, putative [... 279 2e-87
ref|XP_002314847.1| predicted protein [Populus trichocarpa] gi|2... 270 7e-87
ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261... 271 1e-86
emb|CBI15488.3| unnamed protein product [Vitis vinifera] 271 1e-86
>ref|XP_002314844.1| predicted protein [Populus trichocarpa] gi|222863884|gb|EEF01015.1|
predicted protein [Populus trichocarpa]
Length = 365
Score = 273 bits (699), Expect(2) = 6e-88
Identities = 139/210 (66%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Frame = -3
Query: 732 SCGRNKTETSKNVEVFLQSYGCRALQVQRYKYSSVKKMTNSFKDTLGKGGYGCVFKGKFR 553
SC R KT S+++EVFL++YG L +RY YS +KKMT +FK+ LG+GG+G VFKG
Sbjct: 26 SCWR-KTRGSQSIEVFLRNYG--TLAPERYSYSELKKMTKNFKEKLGQGGFGSVFKGNLL 82
Query: 552 NGRLVAVKVLNESKGNGEDFVNEVATIGGTKHVNVVSLLGFCAEKTKRALAYEFMSNGSL 373
+GRLVAVKVL +SK NGE+FVNEV++IG T HVN+V+LLGFC E KRAL YEFMSNGSL
Sbjct: 83 DGRLVAVKVLKKSKSNGEEFVNEVSSIGRTSHVNIVTLLGFCFEGPKRALIYEFMSNGSL 142
Query: 372 ERFIYKEKESSTMPLLGWEKLYQIALGIARGLEYLHRGCNTRILHFDIKPHNILLDE--- 202
++ IY+E S P LGWE LYQIA+GIARGLEYLHRGCNTRILHFDIKPHNILLDE
Sbjct: 143 DKHIYEENLSKAHPKLGWETLYQIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDENFC 202
Query: 201 ----DFGMAKLCPTRDISVVSMVGARGTIG 124
DFG+AK+CP+++ S+VSM+GARGT G
Sbjct: 203 PKISDFGLAKICPSKE-SIVSMLGARGTAG 231
Score = 78.2 bits (191), Expect(2) = 6e-88
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = -2
Query: 121 GYIAPEVCCRNFGGVSHKSDVYSYGMMVLEMIGGRKNIDV 2
GYIAPEV CRNFGGVSHKSDVYSYGM+VLEMIGGRKN V
Sbjct: 231 GYIAPEVFCRNFGGVSHKSDVYSYGMLVLEMIGGRKNFRV 270
>ref|XP_002527020.1| receptor serine/threonine kinase, putative [Ricinus communis]
gi|223533655|gb|EEF35392.1| receptor serine/threonine
kinase, putative [Ricinus communis]
Length = 405
Score = 279 bits (713), Expect(2) = 2e-87
Identities = 141/209 (67%), Positives = 168/209 (80%), Gaps = 7/209 (3%)
Frame = -3
Query: 729 CGRNKTETSKNVEVFLQSYGCRALQVQRYKYSSVKKMTNSFKDTLGKGGYGCVFKGKFRN 550
C + +TE SK++E FL++ G A++ RYKY+ VKKMT SFKD LG+GGYG VFKGK +
Sbjct: 52 CWKKQTEESKSIEAFLRNGGPMAME--RYKYTEVKKMTQSFKDKLGQGGYGGVFKGKLPD 109
Query: 549 GRLVAVKVLNESKGNGEDFVNEVATIGGTKHVNVVSLLGFCAEKTKRALAYEFMSNGSLE 370
GR VAVK+L ESKGNGE+F+NEVA+I T HVNVV+LLGFC E KRAL YEFMSNGSLE
Sbjct: 110 GRDVAVKILKESKGNGEEFINEVASISRTSHVNVVTLLGFCYEGCKRALIYEFMSNGSLE 169
Query: 369 RFIYKEKESSTMPLLGWEKLYQIALGIARGLEYLHRGCNTRILHFDIKPHNILLDE---- 202
++I KEK S LGWE LY+IA+G+ARGLEYLHRGCNTRILHFDIKPHNILLDE
Sbjct: 170 KYISKEKSSRANHELGWETLYEIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDEEFRP 229
Query: 201 ---DFGMAKLCPTRDISVVSMVGARGTIG 124
DFG+AK+CP R+ S+VSM+GARGT+G
Sbjct: 230 KISDFGLAKICPGRE-SIVSMLGARGTVG 257
Score = 70.9 bits (172), Expect(2) = 2e-87
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = -2
Query: 124 IGYIAPEVCCRNFGGVSHKSDVYSYGMMVLEMIGGRKNI 8
+GYIAPEV RNFGGVS+KSDVYSYGM+VLEM+G RKNI
Sbjct: 256 VGYIAPEVFYRNFGGVSYKSDVYSYGMLVLEMVGARKNI 294
>ref|XP_002314847.1| predicted protein [Populus trichocarpa] gi|222863887|gb|EEF01018.1|
predicted protein [Populus trichocarpa]
Length = 324
Score = 270 bits (690), Expect(2) = 7e-87
Identities = 136/205 (66%), Positives = 163/205 (79%), Gaps = 7/205 (3%)
Frame = -3
Query: 717 KTETSKNVEVFLQSYGCRALQVQRYKYSSVKKMTNSFKDTLGKGGYGCVFKGKFRNGRLV 538
KT S+++E FL++YG L +RY YS +KKMT +FK+ LG+GGYG VFKG +GRLV
Sbjct: 3 KTRGSQSMEAFLRNYG--TLAPKRYSYSELKKMTKNFKEKLGQGGYGSVFKGNLLDGRLV 60
Query: 537 AVKVLNESKGNGEDFVNEVATIGGTKHVNVVSLLGFCAEKTKRALAYEFMSNGSLERFIY 358
AVKVL +SK NGE+FVNEV++IG T HVN+V+LLGFC E KRAL YEFMSNGSL++ IY
Sbjct: 61 AVKVLKKSKSNGEEFVNEVSSIGMTSHVNIVTLLGFCFEGPKRALIYEFMSNGSLDKHIY 120
Query: 357 KEKESSTMPLLGWEKLYQIALGIARGLEYLHRGCNTRILHFDIKPHNILLDE-------D 199
+E S P LGWE LYQIA+GIARGLEYLHRGCNTRILHFDIKPHNILLDE D
Sbjct: 121 EENLSKAQPKLGWETLYQIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISD 180
Query: 198 FGMAKLCPTRDISVVSMVGARGTIG 124
FG+AK+CP ++ S+VSM+GARGT G
Sbjct: 181 FGLAKICPGKE-SIVSMLGARGTAG 204
Score = 78.2 bits (191), Expect(2) = 7e-87
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = -2
Query: 121 GYIAPEVCCRNFGGVSHKSDVYSYGMMVLEMIGGRKNIDV 2
GYIAPEV CRNFGGVSHKSDVYSYGM+VLEMIGGRKN V
Sbjct: 204 GYIAPEVFCRNFGGVSHKSDVYSYGMLVLEMIGGRKNFRV 243
>ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261246 [Vitis vinifera]
Length = 1963
Score = 271 bits (693), Expect(2) = 1e-86
Identities = 152/311 (48%), Positives = 201/311 (64%), Gaps = 23/311 (7%)
Frame = -3
Query: 987 STGPNFSQAYKLGFELVWSTPTE-CLVCEKFGGMCQYSTTTGFPRCVC---GFLY----- 835
S G +A +GF++ +S T C+ C GG+C S+T+ F C+C + Y
Sbjct: 1518 SNGEGLEKALNMGFDVDYSVVTGLCVQCNASGGICGSSSTSQFS-CLCRDKSYPYSCQKS 1576
Query: 834 ----LEDTVCPSRVSTXXXXXXXXXXXXI-YRKNISS--LCSCGRNKTETSKNVEVFLQS 676
+ T+ + V+ +++ IS L R +++ +N+E F+++
Sbjct: 1577 ESANIPKTIMMAVVAAGVGTLFASILIIFCFKRKISKHRLMFIWRKRSDADQNIEEFVRN 1636
Query: 675 YGCRALQVQRYKYSSVKKMTNSFKDTLGKGGYGCVFKGKFRNGRLVAVKVLNESKGNGED 496
YG +A +RY YS+VKKMTN+FKD LG+GGYG V+KGK +G LVAVKVLN SKGNG++
Sbjct: 1637 YGSQA--PKRYSYSNVKKMTNAFKDKLGQGGYGGVYKGKLGDGHLVAVKVLNTSKGNGDE 1694
Query: 495 FVNEVATIGGTKHVNVVSLLGFCAEKTKRALAYEFMSNGSLERFIYKEKESSTMPLLGWE 316
F+NEVA+I T HVN+V LLGFC E K+AL YEFMSNGSLE F+ E LGWE
Sbjct: 1695 FINEVASISRTSHVNIVRLLGFCFEGGKKALIYEFMSNGSLENFLGSENPLKVSKHLGWE 1754
Query: 315 KLYQIALGIARGLEYLHRGCNTRILHFDIKPHNILLDE-------DFGMAKLCPTRDISV 157
KLYQIA+GIARGLEYLH GC T+ILHFD+KPHNILLD+ DFG+AKLCP ++ S+
Sbjct: 1755 KLYQIAVGIARGLEYLHCGCRTKILHFDVKPHNILLDQDFSPKISDFGLAKLCPPKE-SI 1813
Query: 156 VSMVGARGTIG 124
+SM ARGTIG
Sbjct: 1814 ISMSAARGTIG 1824
Score = 76.3 bits (186), Expect(2) = 1e-86
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = -2
Query: 124 IGYIAPEVCCRNFGGVSHKSDVYSYGMMVLEMIGGRKNID 5
IGY+APEV CRNFG VSHKSDVYSYGMMVLEM+GGR+N++
Sbjct: 1823 IGYVAPEVFCRNFGQVSHKSDVYSYGMMVLEMVGGRQNVN 1862
>emb|CBI15488.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 271 bits (693), Expect(2) = 1e-86
Identities = 152/311 (48%), Positives = 201/311 (64%), Gaps = 23/311 (7%)
Frame = -3
Query: 987 STGPNFSQAYKLGFELVWSTPTE-CLVCEKFGGMCQYSTTTGFPRCVC---GFLY----- 835
S G +A +GF++ +S T C+ C GG+C S+T+ F C+C + Y
Sbjct: 222 SNGEGLEKALNMGFDVDYSVVTGLCVQCNASGGICGSSSTSQFS-CLCRDKSYPYSCQKS 280
Query: 834 ----LEDTVCPSRVSTXXXXXXXXXXXXI-YRKNISS--LCSCGRNKTETSKNVEVFLQS 676
+ T+ + V+ +++ IS L R +++ +N+E F+++
Sbjct: 281 ESANIPKTIMMAVVAAGVGTLFASILIIFCFKRKISKHRLMFIWRKRSDADQNIEEFVRN 340
Query: 675 YGCRALQVQRYKYSSVKKMTNSFKDTLGKGGYGCVFKGKFRNGRLVAVKVLNESKGNGED 496
YG +A +RY YS+VKKMTN+FKD LG+GGYG V+KGK +G LVAVKVLN SKGNG++
Sbjct: 341 YGSQA--PKRYSYSNVKKMTNAFKDKLGQGGYGGVYKGKLGDGHLVAVKVLNTSKGNGDE 398
Query: 495 FVNEVATIGGTKHVNVVSLLGFCAEKTKRALAYEFMSNGSLERFIYKEKESSTMPLLGWE 316
F+NEVA+I T HVN+V LLGFC E K+AL YEFMSNGSLE F+ E LGWE
Sbjct: 399 FINEVASISRTSHVNIVRLLGFCFEGGKKALIYEFMSNGSLENFLGSENPLKVSKHLGWE 458
Query: 315 KLYQIALGIARGLEYLHRGCNTRILHFDIKPHNILLDE-------DFGMAKLCPTRDISV 157
KLYQIA+GIARGLEYLH GC T+ILHFD+KPHNILLD+ DFG+AKLCP ++ S+
Sbjct: 459 KLYQIAVGIARGLEYLHCGCRTKILHFDVKPHNILLDQDFSPKISDFGLAKLCPPKE-SI 517
Query: 156 VSMVGARGTIG 124
+SM ARGTIG
Sbjct: 518 ISMSAARGTIG 528
Score = 76.3 bits (186), Expect(2) = 1e-86
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = -2
Query: 124 IGYIAPEVCCRNFGGVSHKSDVYSYGMMVLEMIGGRKNID 5
IGY+APEV CRNFG VSHKSDVYSYGMMVLEM+GGR+N++
Sbjct: 527 IGYVAPEVFCRNFGQVSHKSDVYSYGMMVLEMVGGRQNVN 566