BLASTX nr result

ID: Coptis23_contig00001997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001997
         (1762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242010.1| uncharacterized protein LOC100796450 [Glycin...   276   2e-76
ref|NP_001239779.1| uncharacterized protein LOC100808989 [Glycin...   270   1e-74
ref|XP_002266388.1| PREDICTED: uncharacterized protein LOC100252...   255   2e-69
gb|AFK48098.1| unknown [Medicago truncatula]                          250   9e-68
ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208...   238   1e-64

>ref|NP_001242010.1| uncharacterized protein LOC100796450 [Glycine max]
            gi|255634801|gb|ACU17761.1| unknown [Glycine max]
          Length = 328

 Score =  276 bits (707), Expect(2) = 2e-76
 Identities = 158/288 (54%), Positives = 184/288 (63%), Gaps = 17/288 (5%)
 Frame = +2

Query: 188  MENKQQSFRQFSDQLRLQGSSFANLSINDSIWSTTTFTNKRNEERRNFDIRVGAERSDTG 367
            MEN  QSF QFSDQLRLQ S+ ANLS+NDSIWS + + +KR +ER NFDI+VG E  ++ 
Sbjct: 1    MENNNQSFWQFSDQLRLQASNLANLSLNDSIWSNS-YISKRRDERINFDIKVGGE-INSF 58

Query: 368  VGKQNGSEINGFNNG------WKVGNSIGEVVGNVQKSSNLNGVFNKGGVFSKPGXXXXX 529
              K+   + N   NG      +   N +G  VG V     LNG FNKG ++SKPG     
Sbjct: 59   KSKEPACDYNENMNGSLLAVPYNNNNILG--VGGV----GLNGGFNKG-IYSKPGFANLN 111

Query: 530  XXXXXXXXX-GEK----------SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDKRFK 676
                      G K          S+                            A DKRFK
Sbjct: 112  NNINLNINPKGHKFKDEDELFHPSKPSQEKTTTSTKKHGGNTNNDDNSKDSKAAGDKRFK 171

Query: 677  TLPPSESLPRSEIIGGYIFVCNNDTMQENLQRQLFGLPPRYRDSVRAITPGLPLFLYNYS 856
            TLPP+ESLPR+E IGGYIFVCNNDTM ENL+RQLFGLPPRYRDSVRAITPGLPLFLYNYS
Sbjct: 172  TLPPAESLPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYS 231

Query: 857  NHQLHGVFEASSFGGANIDPTAWGDKKCPGESRFPAQVKVVTRKICNP 1000
             HQLHG+FEA+SFGG+N+DP+AW DKKCPGESRFPAQV+V+TRK C P
Sbjct: 232  THQLHGIFEAASFGGSNVDPSAWEDKKCPGESRFPAQVRVITRKTCEP 279



 Score = 38.1 bits (87), Expect(2) = 2e-76
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +3

Query: 1116 KFRLELSVPEALALLDVFAE 1175
            KFRLEL+VPEAL+LLD+FAE
Sbjct: 296  KFRLELNVPEALSLLDIFAE 315


>ref|NP_001239779.1| uncharacterized protein LOC100808989 [Glycine max]
            gi|255637142|gb|ACU18902.1| unknown [Glycine max]
          Length = 330

 Score =  270 bits (691), Expect(2) = 1e-74
 Identities = 155/286 (54%), Positives = 177/286 (61%), Gaps = 15/286 (5%)
 Frame = +2

Query: 188  MENKQQSFRQFSDQLRLQGSSFANLSINDSIWSTTTFTNKRNEERRNFDIRVGAERSDTG 367
            MEN  QSF QFSDQLRLQ S+ ANLS+NDSIWS   + +KR +ER NFDI+VG E  ++ 
Sbjct: 1    MENNNQSFWQFSDQLRLQASNLANLSLNDSIWSNN-YISKRRDERINFDIKVGGE-INSF 58

Query: 368  VGKQNGSEINGFNNG------WKVGNSIGEVVGNVQKSSNLNGVFNKGGVFSKPGXXXXX 529
              K    + N   NG      +   N+   ++G       LNG FNKG ++SKP      
Sbjct: 59   KSKDPACDYNDNVNGSLLAMPYNNNNNNNIILGF--GGVGLNGGFNKG-IYSKPAFANLN 115

Query: 530  XXXXXXXXX-GEKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AVDKRFKTL 682
                      G K +                                    A DKRFKTL
Sbjct: 116  NNINLNINPKGHKGKVEDELFHPSKSSKKNNNLNKKHGDNNNNDNNKDSKAAGDKRFKTL 175

Query: 683  PPSESLPRSEIIGGYIFVCNNDTMQENLQRQLFGLPPRYRDSVRAITPGLPLFLYNYSNH 862
            PPSESLPR E IGGYIFVCNNDTM ENL+RQLFGLPPRYRDSVRAITPGLPLFLYNYS H
Sbjct: 176  PPSESLPRDETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTH 235

Query: 863  QLHGVFEASSFGGANIDPTAWGDKKCPGESRFPAQVKVVTRKICNP 1000
            QLHG+FEA+SFGG NIDP+AW DKKCPGESRFPAQV+V+TRK C P
Sbjct: 236  QLHGIFEAASFGGTNIDPSAWEDKKCPGESRFPAQVRVITRKTCEP 281



 Score = 38.1 bits (87), Expect(2) = 1e-74
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +3

Query: 1116 KFRLELSVPEALALLDVFAE 1175
            KFRLEL+VPEAL+LLD+FAE
Sbjct: 298  KFRLELNVPEALSLLDIFAE 317


>ref|XP_002266388.1| PREDICTED: uncharacterized protein LOC100252953 [Vitis vinifera]
          Length = 389

 Score =  255 bits (651), Expect(2) = 2e-69
 Identities = 135/256 (52%), Positives = 160/256 (62%), Gaps = 9/256 (3%)
 Frame = +2

Query: 260  LSINDSIWSTTTFTNKRNEERRNFDIRVGAERSDTGVGKQNGSEINGFNNGWKVGNSIGE 439
            + +   I S ++   K ++    +++ VG E +     +Q G++ NGFN GWK+G  +  
Sbjct: 98   MRVGGEINSGSSLKQKGSDFNGGYEMMVGREMNSVNDLRQKGNDYNGFNGGWKIG--VSP 155

Query: 440  VVGNVQKSSNLNGVFNKGGVFSKPGXXXXXXXXXXXXXX------GEKS---RXXXXXXX 592
             +G  Q +  +NG FNKG V+SKPG                    GE     +       
Sbjct: 156  FMGGAQSNVGVNGGFNKG-VYSKPGNYVNSNINVKNGNNKNGNFKGEDEHGVKVGKKNKG 214

Query: 593  XXXXXXXXXXXXXXXXXXXXXAVDKRFKTLPPSESLPRSEIIGGYIFVCNNDTMQENLQR 772
                                 A DKRFKTLPPSESLPR+E +GGYIFVCNNDTMQENL+R
Sbjct: 215  NKNNNNNNNNDGDNNSNGTKTAADKRFKTLPPSESLPRNETVGGYIFVCNNDTMQENLKR 274

Query: 773  QLFGLPPRYRDSVRAITPGLPLFLYNYSNHQLHGVFEASSFGGANIDPTAWGDKKCPGES 952
            QLFGLPPRYRDSVRAITPGLPLFLYNYS HQLHGVFEA+SFGG NIDPTAW DKKCPGES
Sbjct: 275  QLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKCPGES 334

Query: 953  RFPAQVKVVTRKICNP 1000
            RFPAQV+VVTRKIC P
Sbjct: 335  RFPAQVRVVTRKICEP 350



 Score = 35.8 bits (81), Expect(2) = 2e-69
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +3

Query: 1116 KFRLELSVPEALALLDVFAE 1175
            KFRLEL+VPEAL+LLD+F E
Sbjct: 367  KFRLELNVPEALSLLDIFNE 386



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 49/97 (50%), Positives = 59/97 (60%)
 Frame = +2

Query: 188 MENKQQSFRQFSDQLRLQGSSFANLSINDSIWSTTTFTNKRNEERRNFDIRVGAERSDTG 367
           ME  QQSF QFSDQLR+Q S+ ANLS+N+SIWS+     KR +ERRNFDIRVG E +   
Sbjct: 1   MEGNQQSFWQFSDQLRVQTSNLANLSLNESIWSSP--YTKRQDERRNFDIRVGGEINTGS 58

Query: 368 VGKQNGSEINGFNNGWKVGNSIGEVVGNVQKSSNLNG 478
             KQ G + NG     +VG  I       QK  + NG
Sbjct: 59  SLKQKGLDFNG-GYDMRVGGEINSGSSLKQKVLDFNG 94


>gb|AFK48098.1| unknown [Medicago truncatula]
          Length = 331

 Score =  250 bits (639), Expect(2) = 9e-68
 Identities = 142/295 (48%), Positives = 168/295 (56%), Gaps = 26/295 (8%)
 Frame = +2

Query: 194  NKQQSFRQFSDQLRLQGSSFANLSINDSIWSTTTFTNKRNEERRNFDIRVG-AERSDTGV 370
            N + SF QFSDQLR Q S+ A+LS+NDSIWST     KR ++RRNFD++      S T  
Sbjct: 6    NNENSFWQFSDQLRHQTSNLASLSLNDSIWSTNM--TKRPDQRRNFDVKNSDINNSFTNF 63

Query: 371  GKQNGSEIN-------------------------GFNNGWKVGNSIGEVVGNVQKSSNLN 475
              +  S++N                         GFN G      +  +  N    SN+N
Sbjct: 64   NSKPSSDLNDGWKMMNNSNGPLFSMPHNNNSSFAGFNKGIYSSPYVNNLNNNTNNLSNIN 123

Query: 476  GVFNKGGVFSKPGXXXXXXXXXXXXXXGEKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 655
                K G   K G                 +                             
Sbjct: 124  LNGYKSGF--KVGDEFQLGNKGVKKNINNNNNINKKHGDNTDVAKT-------------- 167

Query: 656  AVDKRFKTLPPSESLPRSEIIGGYIFVCNNDTMQENLQRQLFGLPPRYRDSVRAITPGLP 835
            + DK+FKTLPPSESLPR+E IGGYIFVCNNDTM ENL+RQ+FGLPPRYRDSVR ITPGLP
Sbjct: 168  SADKKFKTLPPSESLPRNETIGGYIFVCNNDTMAENLKRQIFGLPPRYRDSVRTITPGLP 227

Query: 836  LFLYNYSNHQLHGVFEASSFGGANIDPTAWGDKKCPGESRFPAQVKVVTRKICNP 1000
            LFLYNYS HQLHG+FEA+SFGG+NIDPTAW DKKCPGESRFPAQV+V+TRK+C P
Sbjct: 228  LFLYNYSTHQLHGIFEAASFGGSNIDPTAWEDKKCPGESRFPAQVQVITRKVCEP 282



 Score = 35.0 bits (79), Expect(2) = 9e-68
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +3

Query: 1116 KFRLELSVPEALALLDVFAE 1175
            KFRLELSV EAL+LLD+FA+
Sbjct: 299  KFRLELSVSEALSLLDIFAD 318


>ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208173 [Cucumis sativus]
            gi|449506207|ref|XP_004162682.1| PREDICTED:
            uncharacterized LOC101208173 [Cucumis sativus]
          Length = 371

 Score =  238 bits (607), Expect(2) = 1e-64
 Identities = 124/215 (57%), Positives = 143/215 (66%), Gaps = 6/215 (2%)
 Frame = +2

Query: 374  KQNGSEINGFNNGWKVGNS---IGEVVGNVQKSSNLNGVFNKGGVFSKPGXXXXXXXXXX 544
            K  GS+ N FN+GWK+ ++   +  V+G  QK   +NG FNKG V+SK G          
Sbjct: 121  KSKGSDFNAFNDGWKLNSANMGVDPVIGGAQKG--INGGFNKG-VYSKIGNFNSNSFVNL 177

Query: 545  XXXXGE---KSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDKRFKTLPPSESLPRSEI 715
                     +                              A+DKRFKTLPPSESLPR+E 
Sbjct: 178  KNYKNSGKVEEEKGGKTGKKNSNKNNSGENNNDNKEANKNALDKRFKTLPPSESLPRNET 237

Query: 716  IGGYIFVCNNDTMQENLQRQLFGLPPRYRDSVRAITPGLPLFLYNYSNHQLHGVFEASSF 895
            IGGYIFVCNNDTMQENL+RQLFGLPPRYRDSVRAITPGLP+FLYNYS HQLHG+FEA+SF
Sbjct: 238  IGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASF 297

Query: 896  GGANIDPTAWGDKKCPGESRFPAQVKVVTRKICNP 1000
            GG NIDPTAW DKK PGESRFPAQV++VTRKIC+P
Sbjct: 298  GGTNIDPTAWEDKKTPGESRFPAQVRIVTRKICDP 332



 Score = 37.0 bits (84), Expect(2) = 1e-64
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +3

Query: 1116 KFRLELSVPEALALLDVFAEVS 1181
            KFRLEL++PEAL+LLD+F E S
Sbjct: 349  KFRLELNIPEALSLLDIFGEQS 370



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
 Frame = +2

Query: 188 MENKQQSFRQFSDQLRLQGSSFANLSINDSIWSTTTFTNKRNEERRNFDIRVGAERSDTG 367
           MEN  QSFRQFSDQLR+Q  + ANLS+NDSIWS  ++ +KR EERRNFD+R G E +   
Sbjct: 1   MENNPQSFRQFSDQLRVQTGNLANLSLNDSIWS-NSYVSKRPEERRNFDVRNGGEVNSLN 59

Query: 368 --VGKQNGSEINGFNNGW-KVGNSIGEVVGNVQKSSNLNGVFNKG 493
               K + S++N FN+GW     S+   + N   +SN   + + G
Sbjct: 60  NFKPKVSDSDVNRFNDGWNSFKPSVASDLNNWSNTSNSMNLSSTG 104


Top