BLASTX nr result

ID: Coptis23_contig00001988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001988
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853...   149   2e-33
ref|XP_002274430.1| PREDICTED: uncharacterized protein LOC100261...   149   2e-33
gb|AFK41521.1| unknown [Lotus japonicus]                              143   1e-31
ref|XP_004137184.1| PREDICTED: uncharacterized protein At4g01150...   139   1e-30
ref|XP_004163298.1| PREDICTED: uncharacterized protein At4g01150...   139   2e-30

>ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853187 isoform 1 [Vitis
           vinifera] gi|359495655|ref|XP_003635048.1| PREDICTED:
           uncharacterized protein LOC100853187 isoform 2 [Vitis
           vinifera] gi|297735931|emb|CBI18707.3| unnamed protein
           product [Vitis vinifera]
          Length = 204

 Score =  149 bits (375), Expect = 2e-33
 Identities = 69/118 (58%), Positives = 88/118 (74%)
 Frame = -3

Query: 570 EQNAPGETTSVVVQKEESPAGEQFQIYEFLEKLNLKLDSEDTYSVLIYGTGALVALWLAS 391
           E+N   E        E+S   EQ   +EFL+ LN+K DSED YS+ +YGTGAL ALW AS
Sbjct: 87  EENVYNEVIPTEAPIEDSQVEEQTVAFEFLDNLNIKFDSEDPYSIFLYGTGALTALWFAS 146

Query: 390 AVIGAIDSIPLVPKVLEIVGLSYTIWFTSRYLIFKKNRDELLTKIEEVKHQIIGSTSE 217
           A++GAIDSIP+ PK++EIVGL YT+WF++RYLIFK+NRDEL  KIEE+K Q++GS  E
Sbjct: 147 AIVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQNRDELAAKIEELKQQVLGSEDE 204


>ref|XP_002274430.1| PREDICTED: uncharacterized protein LOC100261101 [Vitis vinifera]
           gi|297735928|emb|CBI18704.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score =  149 bits (375), Expect = 2e-33
 Identities = 69/118 (58%), Positives = 88/118 (74%)
 Frame = -3

Query: 570 EQNAPGETTSVVVQKEESPAGEQFQIYEFLEKLNLKLDSEDTYSVLIYGTGALVALWLAS 391
           E+N   E        E+S   EQ   +EFL+ LN+K DSED YS+ +YGTGAL ALW AS
Sbjct: 87  EENVYNEVIPTEAPIEDSQVEEQTVAFEFLDNLNIKFDSEDPYSIFLYGTGALTALWFAS 146

Query: 390 AVIGAIDSIPLVPKVLEIVGLSYTIWFTSRYLIFKKNRDELLTKIEEVKHQIIGSTSE 217
           A++GAIDSIP+ PK++EIVGL YT+WF++RYLIFK+NRDEL  KIEE+K Q++GS  E
Sbjct: 147 AIVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQNRDELAAKIEELKQQVLGSEDE 204


>gb|AFK41521.1| unknown [Lotus japonicus]
          Length = 199

 Score =  143 bits (360), Expect = 1e-31
 Identities = 78/131 (59%), Positives = 96/131 (73%), Gaps = 2/131 (1%)
 Frame = -3

Query: 612 ENVSGVVVT--MEGPDEQNAPGETTSVVVQKEESPAGEQFQIYEFLEKLNLKLDSEDTYS 439
           E   GVV+   ++G  E N   ET      KEE P  EQ   +  L+ LN+KLD  DT S
Sbjct: 69  EKRDGVVILDDVKGAGE-NGFSETVVSQDPKEEVPVDEQ--AFALLDDLNMKLDLNDTGS 125

Query: 438 VLIYGTGALVALWLASAVIGAIDSIPLVPKVLEIVGLSYTIWFTSRYLIFKKNRDELLTK 259
           +++YG+GA+VALWL SAVIGAIDSIPL PK+LE+VGLSYT+WFT+RYL+FKKNRDEL  K
Sbjct: 126 IVLYGSGAVVALWLLSAVIGAIDSIPLFPKLLEVVGLSYTVWFTTRYLLFKKNRDELGAK 185

Query: 258 IEEVKHQIIGS 226
           IEE+K Q+IGS
Sbjct: 186 IEELKEQVIGS 196


>ref|XP_004137184.1| PREDICTED: uncharacterized protein At4g01150, chloroplastic-like
           [Cucumis sativus]
          Length = 206

 Score =  139 bits (350), Expect = 1e-30
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
 Frame = -3

Query: 747 SYSTEVNGQVEDVSGVVSSYEQTTPGDTPEVVPKDPYS-TEVDGQLENVSGVVVTMEGPD 571
           +++T ++  +ED     S   + +P   PE +P D  + TEV  Q       V+T+   D
Sbjct: 37  AFTTSLHSLLEDSPSASSLTLEDSP---PEEIPSDVLAATEVPKQEPVEDVPVITL---D 90

Query: 570 EQNAPGETTSVVVQ--KEESPAGEQFQIYEFLEKLNLKLDSEDTYSVLIYGTGALVALWL 397
           + ++ G+   V  +  KE+   G Q Q +EFL   +LKL+S DTYS+ +YG GA   +WL
Sbjct: 91  DSSSAGKVEMVTSEEPKEQPLEGAQEQAFEFLN--DLKLESVDTYSLALYGAGAFFGIWL 148

Query: 396 ASAVIGAIDSIPLVPKVLEIVGLSYTIWFTSRYLIFKKNRDELLTKIEEVKHQIIGS 226
            SA++GA+DSIPLVPK+LE+VGL Y++WFT+RYL+FK++RDEL  +I+E+K Q++GS
Sbjct: 149 VSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLGS 205


>ref|XP_004163298.1| PREDICTED: uncharacterized protein At4g01150, chloroplastic-like
           [Cucumis sativus]
          Length = 210

 Score =  139 bits (349), Expect = 2e-30
 Identities = 81/205 (39%), Positives = 122/205 (59%), Gaps = 3/205 (1%)
 Frame = -3

Query: 831 SVAVTKEESSDDQNAQSDTTSVVVPKDESYSTEVNGQVEDVSGVVSSYEQTTPGDTPEVV 652
           +V++ +  +SD+ N  S           S+ TE    V  +    S+   T     PE +
Sbjct: 21  AVSLPRAAASDESNGSS-----------SFFTEQRDSVTVLEDSPSASSLTLEDSPPEEI 69

Query: 651 PKDPYS-TEVDGQLENVSGVVVTMEGPDEQNAPGETTSVVVQ--KEESPAGEQFQIYEFL 481
           P    + TEV  Q       V+T+   D+ ++ G+   V  +  KE+   G Q Q +EFL
Sbjct: 70  PSVVLAATEVPKQEPVEDVPVITL---DDSSSAGKVEMVTSEEPKEQPLEGAQEQAFEFL 126

Query: 480 EKLNLKLDSEDTYSVLIYGTGALVALWLASAVIGAIDSIPLVPKVLEIVGLSYTIWFTSR 301
              +LKL+S DTYS+ +YG GA   +WL SA++GA+DSIPLVPK+LE+VGL Y++WFT+R
Sbjct: 127 N--DLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTAR 184

Query: 300 YLIFKKNRDELLTKIEEVKHQIIGS 226
           YL+FK++RDEL  +I+E+K Q++GS
Sbjct: 185 YLLFKESRDELAARIDELKEQVLGS 209


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