BLASTX nr result

ID: Coptis23_contig00001979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001979
         (2673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509611.1| aminomethyltransferase, putative [Ricinus co...   544   e-152
emb|CBI22149.3| unnamed protein product [Vitis vinifera]              523   e-146
ref|XP_002329854.1| predicted protein [Populus trichocarpa] gi|2...   520   e-145
ref|XP_004159509.1| PREDICTED: LOW QUALITY PROTEIN: putative tra...   515   e-143
ref|XP_004147948.1| PREDICTED: putative transferase CAF17 homolo...   515   e-143

>ref|XP_002509611.1| aminomethyltransferase, putative [Ricinus communis]
            gi|223549510|gb|EEF50998.1| aminomethyltransferase,
            putative [Ricinus communis]
          Length = 391

 Score =  544 bits (1401), Expect = e-152
 Identities = 270/383 (70%), Positives = 318/383 (83%), Gaps = 8/383 (2%)
 Frame = -2

Query: 1304 THHTHNLNDVGSMATHLESRSVIRFRGPDTIKFLQGLLTNDIKRFAESTGEKKSSYLSTP 1125
            ++H H L+   S +  L SRSVIRF GPDT+KFLQGLLTNDI+RF E+  E  +S+L TP
Sbjct: 11   SYHHHALDKTTSTSL-LNSRSVIRFSGPDTVKFLQGLLTNDIRRFDETPSEA-TSFLPTP 68

Query: 1124 NVATVSTPPMYAALLTPQGRFLYDFFLYKPPQSDEKLDKS--------NQLFELLADVDS 969
            N+ATVS PPMYAALLTPQGRFLYD FLY+P ++ EKL+KS        N   ELLADVD+
Sbjct: 69   NLATVSVPPMYAALLTPQGRFLYDLFLYRPTRAGEKLNKSGSGPGSDSNGSVELLADVDT 128

Query: 968  LVLDEILDCFKKYRLRAKVEIENVAKEFSCWQRFGRDLCSDSESTEEPEASSVGYGASVD 789
             VLDE+L  F++YRLR+KVEIENVA EFSCWQRFG +L   S+  +EPEA+SVG+G+ VD
Sbjct: 129  SVLDELLHTFQRYRLRSKVEIENVAGEFSCWQRFGGNLTETSKVADEPEAASVGWGSGVD 188

Query: 788  CAALSASQGNGLGWEWYKDPRLDLLGFRGIFPTNTTPPLVEADKETNEENYLQWRIEKGI 609
             AA S++QG+G GW+W+KDPRLD LGFRGIFP+N TPPLVEADKETNE+NY  WRIE G+
Sbjct: 189  RAARSSTQGDGHGWQWFKDPRLDCLGFRGIFPSNQTPPLVEADKETNEKNYQLWRIENGV 248

Query: 608  AEGTTEIPKGEANPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLKFVDGN 429
            AEG+TEIPKGEA PLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPL F+D N
Sbjct: 249  AEGSTEIPKGEAIPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLMFLDDN 308

Query: 428  GKELEQKVAARSEVIDSSSNKKVGTVTTALGCRGMGLLRLEEAFKKSGVLSVKGQEDVNV 249
            G E+E+KVA  SEVID++S+KKVG VT ALGCRG+G+LRLEEA+K SG L ++GQ+D+ V
Sbjct: 309  GTEVEEKVAPGSEVIDTTSSKKVGFVTAALGCRGLGVLRLEEAWKGSGSLIIEGQDDLKV 368

Query: 248  EAIRPEWWPAEWFPEHQQHSVAA 180
            E IRP+WWPAEWFPEHQQHS  A
Sbjct: 369  ETIRPKWWPAEWFPEHQQHSAVA 391


>emb|CBI22149.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  523 bits (1348), Expect = e-146
 Identities = 258/371 (69%), Positives = 304/371 (81%), Gaps = 8/371 (2%)
 Frame = -2

Query: 1268 MATHLESRSVIRFRGPDTIKFLQGLLTNDIKRFAESTGEKKSSYLSTPNVATVSTPPMYA 1089
            MA+ L+SRSV+RFRGPDT+KFLQGLLTND++RF ES GE  S+ L TPNV  +S  PMYA
Sbjct: 1    MASLLKSRSVVRFRGPDTVKFLQGLLTNDVQRFCESPGEMTST-LVTPNVPFISDSPMYA 59

Query: 1088 ALLTPQGRFLYDFFLYKPPQSDEKLDKSNQ--------LFELLADVDSLVLDEILDCFKK 933
             +LTPQGRFLYD FLY+P ++ EKLD++            ELLADVD+ VLDE+L+ F K
Sbjct: 60   LMLTPQGRFLYDLFLYRPARASEKLDRTGSGPGSDPDGRLELLADVDATVLDELLERFNK 119

Query: 932  YRLRAKVEIENVAKEFSCWQRFGRDLCSDSESTEEPEASSVGYGASVDCAALSASQGNGL 753
            YRLRA V IENVA+EFSCWQR+G +L     S EEPEA+SVG+GA+VD A  S+S GN  
Sbjct: 120  YRLRADVVIENVAEEFSCWQRYGENLTEKFSSAEEPEAASVGWGAAVDPAGTSSSHGNSH 179

Query: 752  GWEWYKDPRLDLLGFRGIFPTNTTPPLVEADKETNEENYLQWRIEKGIAEGTTEIPKGEA 573
            GW+W+KDPRLD LGFRGIFP+NTTPPLVEADKET+E+NYL WR+EKG+AEG+TEI KGEA
Sbjct: 180  GWQWFKDPRLDSLGFRGIFPSNTTPPLVEADKETDEKNYLLWRLEKGVAEGSTEILKGEA 239

Query: 572  NPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLKFVDGNGKELEQKVAARS 393
             PLEYNLAGLNAISFDKGCYVGQEL+ARTHHRGVIRKRLLPLKF+D +GKE+EQKVA  S
Sbjct: 240  VPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLKFLDDSGKEMEQKVAPGS 299

Query: 392  EVIDSSSNKKVGTVTTALGCRGMGLLRLEEAFKKSGVLSVKGQEDVNVEAIRPEWWPAEW 213
            +VI++ S KK GTVTTAL CRG+GLLRL EA K    L+++GQEDV VEAIRPEWWP EW
Sbjct: 300  DVINAVSGKKAGTVTTALECRGLGLLRLNEALKGPSKLTIQGQEDVKVEAIRPEWWPTEW 359

Query: 212  FPEHQQHSVAA 180
            F E+QQ + +A
Sbjct: 360  FQEYQQDTASA 370


>ref|XP_002329854.1| predicted protein [Populus trichocarpa] gi|222871091|gb|EEF08222.1|
            predicted protein [Populus trichocarpa]
          Length = 392

 Score =  520 bits (1339), Expect = e-145
 Identities = 255/382 (66%), Positives = 304/382 (79%), Gaps = 8/382 (2%)
 Frame = -2

Query: 1301 HHTHNLNDVGSMATHLESRSVIRFRGPDTIKFLQGLLTNDIKRFAESTGEKKSSYLSTPN 1122
            +HT N    G + + L+SRSVIRF GPDTIKFLQGLLTND+K+F+E      +SY+ TPN
Sbjct: 12   YHTLNNTSTGPLVSLLKSRSVIRFSGPDTIKFLQGLLTNDVKKFSELPSGT-TSYVPTPN 70

Query: 1121 VATVSTPPMYAALLTPQGRFLYDFFLYKPPQSDEKLDKSNQL--------FELLADVDSL 966
            + +V  PPMYAA LTPQGRFLYD FLY+ P  +EKLD S            EL ADVDS 
Sbjct: 71   LPSVYVPPMYAAFLTPQGRFLYDLFLYRKPLGEEKLDGSGSGPGSDSGGDLELFADVDSS 130

Query: 965  VLDEILDCFKKYRLRAKVEIENVAKEFSCWQRFGRDLCSDSESTEEPEASSVGYGASVDC 786
            VLDE+L  FK+YRLR+KVEI+NVA++FSCWQRFG +L   S+  EEPEA+SVG G  VD 
Sbjct: 131  VLDELLLTFKRYRLRSKVEIDNVAEDFSCWQRFGGNLAEKSKGEEEPEAASVGSGPGVDH 190

Query: 785  AALSASQGNGLGWEWYKDPRLDLLGFRGIFPTNTTPPLVEADKETNEENYLQWRIEKGIA 606
            +A+S+S GN +GW+W+KDPR+D LG RG+FP+  TPPLVE+DKETNE NYL WRIE GIA
Sbjct: 191  SAMSSSHGNDVGWQWFKDPRVDCLGLRGVFPSKETPPLVESDKETNELNYLLWRIENGIA 250

Query: 605  EGTTEIPKGEANPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLKFVDGNG 426
            EG+TEIP GEA PLEYNL GLNAISFDKGCYVGQE +ARTHHRGVIRKRLL L F+D +G
Sbjct: 251  EGSTEIPIGEAIPLEYNLEGLNAISFDKGCYVGQEFIARTHHRGVIRKRLLSLAFLDDSG 310

Query: 425  KELEQKVAARSEVIDSSSNKKVGTVTTALGCRGMGLLRLEEAFKKSGVLSVKGQEDVNVE 246
            KE+EQKV   SEVI+++S KK+G VTTALGCRG+G+LRL+EAFK SG L+++GQED+ VE
Sbjct: 311  KEVEQKVGPGSEVINTASGKKIGYVTTALGCRGLGVLRLKEAFKGSGSLTIQGQEDIKVE 370

Query: 245  AIRPEWWPAEWFPEHQQHSVAA 180
            AIRP+WWPAEWF EHQQHS  A
Sbjct: 371  AIRPKWWPAEWFSEHQQHSAVA 392


>ref|XP_004159509.1| PREDICTED: LOW QUALITY PROTEIN: putative transferase CAF17 homolog,
            mitochondrial-like [Cucumis sativus]
          Length = 402

 Score =  515 bits (1327), Expect = e-143
 Identities = 249/374 (66%), Positives = 304/374 (81%), Gaps = 8/374 (2%)
 Frame = -2

Query: 1298 HTHNLNDVGSMATHLESRSVIRFRGPDTIKFLQGLLTNDIKRFAESTGEKKSSYLSTPNV 1119
            H+H  N  GSMA+ L SRSVIRFRGPDT+KFL GLLTND++RF E   +K SS L TPN+
Sbjct: 30   HSHFNNASGSMASRLNSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPSDKTSS-LPTPNL 88

Query: 1118 ATVSTPPMYAALLTPQGRFLYDFFLYKPPQSDEKLDK--------SNQLFELLADVDSLV 963
            A V+  PMYAA+LTPQGRFLYD FLY+PP+ DEKL++        S+   EL+ADVDS V
Sbjct: 89   APVTVTPMYAAMLTPQGRFLYDLFLYRPPKPDEKLNRTGSGPGPASDDSVELMADVDSSV 148

Query: 962  LDEILDCFKKYRLRAKVEIENVAKEFSCWQRFGRDLCSDSESTEEPEASSVGYGASVDCA 783
            LDE+L   KKYRLR+KV+IENVA EF CWQRFG  L  ++ S EEPEA+++G+GASVD  
Sbjct: 149  LDELLVTLKKYRLRSKVDIENVADEFXCWQRFGEKLSRNASSVEEPEAANIGWGASVDPT 208

Query: 782  ALSASQGNGLGWEWYKDPRLDLLGFRGIFPTNTTPPLVEADKETNEENYLQWRIEKGIAE 603
            A+SAS+G  +GW+W++DPRL+ LGFRGIFP+N TPPL+EADKET+E+NY+ WR+EKG+AE
Sbjct: 209  AMSASRGEDIGWQWFQDPRLECLGFRGIFPSNQTPPLIEADKETDEDNYVLWRLEKGVAE 268

Query: 602  GTTEIPKGEANPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLKFVDGNGK 423
            G+TEI KGEA PLEYNL GLNAISFDKGCYVGQELVARTHHRGVIRKR++PLKF++  G+
Sbjct: 269  GSTEIQKGEAIPLEYNLVGLNAISFDKGCYVGQELVARTHHRGVIRKRVVPLKFLNDRGE 328

Query: 422  ELEQKVAARSEVIDSSSNKKVGTVTTALGCRGMGLLRLEEAFKKSGVLSVKGQEDVNVEA 243
            + EQKV A SEVI+S+SNKK G V  ALGCRG+GLLRLEEAF+ S  L+++G E V VEA
Sbjct: 329  DAEQKVLAGSEVINSASNKKAGNVIAALGCRGLGLLRLEEAFRGSQSLAIQGLEGVKVEA 388

Query: 242  IRPEWWPAEWFPEH 201
            ++P+WW AEW  EH
Sbjct: 389  VKPDWWSAEWLQEH 402


>ref|XP_004147948.1| PREDICTED: putative transferase CAF17 homolog, mitochondrial-like
            [Cucumis sativus]
          Length = 402

 Score =  515 bits (1326), Expect = e-143
 Identities = 249/374 (66%), Positives = 304/374 (81%), Gaps = 8/374 (2%)
 Frame = -2

Query: 1298 HTHNLNDVGSMATHLESRSVIRFRGPDTIKFLQGLLTNDIKRFAESTGEKKSSYLSTPNV 1119
            H+H  N  GSMA+ L SRSVIRFRGPDT+KFL GLLTND++RF E   +K SS L TPN+
Sbjct: 30   HSHFNNASGSMASRLNSRSVIRFRGPDTVKFLHGLLTNDVRRFGEPPSDKTSS-LPTPNL 88

Query: 1118 ATVSTPPMYAALLTPQGRFLYDFFLYKPPQSDEKLDK--------SNQLFELLADVDSLV 963
            A V+  PMYAA+LTPQGRFLYD FLY+PP+ DEKL++        S+   EL+ADVDS V
Sbjct: 89   APVTVTPMYAAMLTPQGRFLYDLFLYRPPKPDEKLNRTGSGPGPASDDSVELMADVDSSV 148

Query: 962  LDEILDCFKKYRLRAKVEIENVAKEFSCWQRFGRDLCSDSESTEEPEASSVGYGASVDCA 783
            LDE+L   KKYRLR+KV+IENVA EF CWQRFG  L  ++ S EEPEA+++G+GASVD  
Sbjct: 149  LDELLVTLKKYRLRSKVDIENVADEFFCWQRFGEKLSRNASSVEEPEAANIGWGASVDPT 208

Query: 782  ALSASQGNGLGWEWYKDPRLDLLGFRGIFPTNTTPPLVEADKETNEENYLQWRIEKGIAE 603
            A+SAS+G  +GW+W++DPRL+ LGFRGIFP+N TPPL+EADKET+E+NY+ WR+EKG+AE
Sbjct: 209  AMSASRGEDIGWQWFQDPRLECLGFRGIFPSNQTPPLIEADKETDEDNYVLWRLEKGVAE 268

Query: 602  GTTEIPKGEANPLEYNLAGLNAISFDKGCYVGQELVARTHHRGVIRKRLLPLKFVDGNGK 423
            G+TEI KGEA PLEYNL GLNAISFDKGCYVGQELVARTHHRGVIRKR++PLKF++  G+
Sbjct: 269  GSTEIQKGEAIPLEYNLVGLNAISFDKGCYVGQELVARTHHRGVIRKRVVPLKFLNDRGE 328

Query: 422  ELEQKVAARSEVIDSSSNKKVGTVTTALGCRGMGLLRLEEAFKKSGVLSVKGQEDVNVEA 243
            + EQKV A SEVI+S+SNKK G V  ALGCRG+GLLRLEEAF+ S  L+++G E V VEA
Sbjct: 329  DAEQKVLAGSEVINSASNKKAGNVIAALGCRGLGLLRLEEAFRGSQSLAIQGLEGVKVEA 388

Query: 242  IRPEWWPAEWFPEH 201
            ++P+WW AEW  EH
Sbjct: 389  VKPDWWSAEWLQEH 402


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