BLASTX nr result

ID: Coptis23_contig00001973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001973
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD83288.1| Fgenesh protein 45 [Beta vulgaris]                      90   5e-16
ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454...    86   1e-14
ref|XP_002517577.1| tso1, putative [Ricinus communis] gi|2235432...    84   5e-14
ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261...    83   8e-14
emb|CBI21012.3| unnamed protein product [Vitis vinifera]               83   8e-14

>gb|ABD83288.1| Fgenesh protein 45 [Beta vulgaris]
          Length = 665

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
 Frame = -1

Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHVTASPTKSG 106
           C CF  G YC E CAC+GC N+PEYED  L TRQ IE+R+P AF P++++ VTASPT   
Sbjct: 501 CDCFAAGFYCGESCACQGCFNRPEYEDTVLETRQQIESRNPLAFAPKVMQTVTASPTTGK 560

Query: 105 V----RTLFLVSQKRGEGICKKPTCLGEF 31
           V     T      KRG   CKK  CL ++
Sbjct: 561 VVEKLSTPSSARHKRGCN-CKKSMCLKKY 588


>ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1,
           putative [Ricinus communis]
          Length = 873

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
 Frame = -1

Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHV---TASPT 115
           C CF  GIYC +PCAC+ C N+PEYED  L TRQ IE+R+P AF P+IV+H     AS  
Sbjct: 467 CDCFAAGIYCADPCACQDCFNRPEYEDTVLETRQQIESRNPLAFAPKIVQHAKEFAASRE 526

Query: 114 KSGVRTLFLVSQKRGEGICKKPTCLGEF 31
                   L   KRG   CKK  CL ++
Sbjct: 527 DRSSSMPSLSRHKRGCN-CKKSMCLKKY 553


>ref|XP_002517577.1| tso1, putative [Ricinus communis] gi|223543209|gb|EEF44741.1| tso1,
           putative [Ricinus communis]
          Length = 348

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
 Frame = -1

Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHVTASPT--K 112
           C CF  G+YC + CAC+ C N+PEYED  L TRQ IE R+P AF P++V+  T SP   +
Sbjct: 34  CECFAAGVYCLDSCACEDCFNRPEYEDTVLDTRQQIEARNPLAFAPKVVKQATNSPANEE 93

Query: 111 SGVRTLFLVSQKRGEGICKKPTCLGEF 31
               T      KRG   CKK  CL ++
Sbjct: 94  GNWTTPSSARHKRGCN-CKKSKCLKKY 119


>ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera]
          Length = 1001

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
 Frame = -1

Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHVTASPTKSG 106
           C CF  GIYC E CAC GC N+ EY+D  L TR+ IE+R+P AF P+IV  V  SP  SG
Sbjct: 581 CDCFAAGIYCAEGCACVGCFNRAEYDDRVLETRKQIESRNPLAFAPKIVPPVNGSPINSG 640

Query: 105 V---RTLFLVSQKRGEGICKKPTCLGEF 31
                T      KRG   CKK  CL ++
Sbjct: 641 EDGRSTPSSARHKRGCN-CKKSMCLKKY 667


>emb|CBI21012.3| unnamed protein product [Vitis vinifera]
          Length = 1094

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
 Frame = -1

Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHVTASPTKSG 106
           C CF  GIYC E CAC GC N+ EY+D  L TR+ IE+R+P AF P+IV  V  SP  SG
Sbjct: 588 CDCFAAGIYCAEGCACVGCFNRAEYDDRVLETRKQIESRNPLAFAPKIVPPVNGSPINSG 647

Query: 105 V---RTLFLVSQKRGEGICKKPTCLGEF 31
                T      KRG   CKK  CL ++
Sbjct: 648 EDGRSTPSSARHKRGCN-CKKSMCLKKY 674


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