BLASTX nr result
ID: Coptis23_contig00001973
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00001973 (792 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD83288.1| Fgenesh protein 45 [Beta vulgaris] 90 5e-16 ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454... 86 1e-14 ref|XP_002517577.1| tso1, putative [Ricinus communis] gi|2235432... 84 5e-14 ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261... 83 8e-14 emb|CBI21012.3| unnamed protein product [Vitis vinifera] 83 8e-14 >gb|ABD83288.1| Fgenesh protein 45 [Beta vulgaris] Length = 665 Score = 90.1 bits (222), Expect = 5e-16 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 4/89 (4%) Frame = -1 Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHVTASPTKSG 106 C CF G YC E CAC+GC N+PEYED L TRQ IE+R+P AF P++++ VTASPT Sbjct: 501 CDCFAAGFYCGESCACQGCFNRPEYEDTVLETRQQIESRNPLAFAPKVMQTVTASPTTGK 560 Query: 105 V----RTLFLVSQKRGEGICKKPTCLGEF 31 V T KRG CKK CL ++ Sbjct: 561 VVEKLSTPSSARHKRGCN-CKKSMCLKKY 588 >ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1, putative [Ricinus communis] Length = 873 Score = 85.5 bits (210), Expect = 1e-14 Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 3/88 (3%) Frame = -1 Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHV---TASPT 115 C CF GIYC +PCAC+ C N+PEYED L TRQ IE+R+P AF P+IV+H AS Sbjct: 467 CDCFAAGIYCADPCACQDCFNRPEYEDTVLETRQQIESRNPLAFAPKIVQHAKEFAASRE 526 Query: 114 KSGVRTLFLVSQKRGEGICKKPTCLGEF 31 L KRG CKK CL ++ Sbjct: 527 DRSSSMPSLSRHKRGCN-CKKSMCLKKY 553 >ref|XP_002517577.1| tso1, putative [Ricinus communis] gi|223543209|gb|EEF44741.1| tso1, putative [Ricinus communis] Length = 348 Score = 83.6 bits (205), Expect = 5e-14 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Frame = -1 Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHVTASPT--K 112 C CF G+YC + CAC+ C N+PEYED L TRQ IE R+P AF P++V+ T SP + Sbjct: 34 CECFAAGVYCLDSCACEDCFNRPEYEDTVLDTRQQIEARNPLAFAPKVVKQATNSPANEE 93 Query: 111 SGVRTLFLVSQKRGEGICKKPTCLGEF 31 T KRG CKK CL ++ Sbjct: 94 GNWTTPSSARHKRGCN-CKKSKCLKKY 119 >ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera] Length = 1001 Score = 82.8 bits (203), Expect = 8e-14 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 3/88 (3%) Frame = -1 Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHVTASPTKSG 106 C CF GIYC E CAC GC N+ EY+D L TR+ IE+R+P AF P+IV V SP SG Sbjct: 581 CDCFAAGIYCAEGCACVGCFNRAEYDDRVLETRKQIESRNPLAFAPKIVPPVNGSPINSG 640 Query: 105 V---RTLFLVSQKRGEGICKKPTCLGEF 31 T KRG CKK CL ++ Sbjct: 641 EDGRSTPSSARHKRGCN-CKKSMCLKKY 667 >emb|CBI21012.3| unnamed protein product [Vitis vinifera] Length = 1094 Score = 82.8 bits (203), Expect = 8e-14 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 3/88 (3%) Frame = -1 Query: 285 CGCFVVGIYCTEPCACKGCINKPEYEDMALGTRQPIETRSPHAFTPEIVRHVTASPTKSG 106 C CF GIYC E CAC GC N+ EY+D L TR+ IE+R+P AF P+IV V SP SG Sbjct: 588 CDCFAAGIYCAEGCACVGCFNRAEYDDRVLETRKQIESRNPLAFAPKIVPPVNGSPINSG 647 Query: 105 V---RTLFLVSQKRGEGICKKPTCLGEF 31 T KRG CKK CL ++ Sbjct: 648 EDGRSTPSSARHKRGCN-CKKSMCLKKY 674