BLASTX nr result

ID: Coptis23_contig00001964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001964
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311050.1| predicted protein [Populus trichocarpa] gi|2...   296   4e-78
ref|XP_002280833.1| PREDICTED: metalloendoproteinase 1 [Vitis vi...   285   8e-75
ref|XP_002311052.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74
ref|XP_002280805.1| PREDICTED: metalloendoproteinase 1-like [Vit...   283   6e-74
emb|CAN73130.1| hypothetical protein VITISV_030258 [Vitis vinifera]   283   6e-74

>ref|XP_002311050.1| predicted protein [Populus trichocarpa] gi|222850870|gb|EEE88417.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  296 bits (759), Expect = 4e-78
 Identities = 146/274 (53%), Positives = 192/274 (70%), Gaps = 8/274 (2%)
 Frame = +2

Query: 2   GCHKGQNVKGVNQVKQYLERFGYLHYNDHSG-----HANDDEFDDLLESAVKDYQLNHQL 166
           GCH+  +VKG++++K+YLE+FGYL Y  H G     HANDDEFDDLLESA+K YQ NH L
Sbjct: 40  GCHRNVSVKGLHELKRYLEKFGYLKYG-HQGKKGHNHANDDEFDDLLESAIKAYQQNHHL 98

Query: 167 KMTGSLNSKTLKQMMKPRCGVPDIINGATRMNSGKKKLQHGSLHTVSHFSFFPRRPTWPA 346
            +TGSL++ T+ +MM+PRCGVPD++NG    ++      H S+HT++H++F P  P W  
Sbjct: 99  NVTGSLDNSTVHEMMQPRCGVPDVVNGTKHYHT------HKSIHTLAHYNFIPENPRW-- 150

Query: 347 NRRSLIYTFRSGVEVIDLPTLRTVMSRAFAKWAAVTQFTFAEAQAGTTSDITIGFQRRAH 526
            +R L Y FRS V+V     +R++ ++AF +WA VT+FTF E    + +DI IGF RR H
Sbjct: 151 TKRQLTYKFRSSVQVPAAQNIRSICAKAFQRWAQVTEFTFQEVSVSSPADIVIGFHRRDH 210

Query: 527 DDNSAFDGPGVTVAHAYPPT-IGVFHYDADEKWSTNPDPTMNEFDLESIAVHEIGHLLGL 703
           +D SAFDGPG T+AHA PP    +FH+DADE WS NP P  N+ DLES+AVHEIGHLLGL
Sbjct: 211 NDGSAFDGPGGTLAHATPPVRNAMFHFDADENWSENPGP--NQMDLESVAVHEIGHLLGL 268

Query: 704 HHSSIP--EAIMFDSIAAGATKRELHGDDVQGIR 799
            H+  P  +AIM   I +G  KR+L  DDVQG+R
Sbjct: 269 DHNDDPNADAIMSSGIPSGIAKRDLRADDVQGVR 302


>ref|XP_002280833.1| PREDICTED: metalloendoproteinase 1 [Vitis vinifera]
           gi|147807820|emb|CAN73129.1| hypothetical protein
           VITISV_030257 [Vitis vinifera]
          Length = 319

 Score =  285 bits (730), Expect = 8e-75
 Identities = 146/274 (53%), Positives = 184/274 (67%), Gaps = 8/274 (2%)
 Frame = +2

Query: 2   GCHKGQNVKGVNQVKQYLERFGYLHYN--DHSGHANDDEFDDLLESAVKDYQLNHQLKMT 175
           GCHKG  V G+ ++K+YLE+FGYL Y+   +  HA+DD+FDDLLESA+K YQ N+ L+ T
Sbjct: 48  GCHKGDEVNGIQKLKKYLEQFGYLSYSRSKNQTHADDDDFDDLLESAIKTYQANYHLEAT 107

Query: 176 GSLNSKTLKQMMKPRCGVPDIINGATRMNSGKKKLQ------HGSLHTVSHFSFFPRRPT 337
           G L+S+T+ +M+KPRCGV DIING   M SGKK+        HGSL TV+H+SFFP  P 
Sbjct: 108 GDLDSETVSEMVKPRCGVADIINGTNWMLSGKKRQYHGHGHGHGSLRTVAHYSFFPGSPR 167

Query: 338 WPANRRSLIYTFRSGVEVIDLPTLRTVMSRAFAKWAAVTQFTFAEAQAGTTSDITIGFQR 517
           WP ++  L Y F  G          + +SRA+ +W + T FTF   Q  T++D+TI F R
Sbjct: 168 WPPSKTYLTYAFLPGTP----NWAMSPVSRAYGRWDSATHFTFGWIQDYTSADMTISFHR 223

Query: 518 RAHDDNSAFDGPGVTVAHAYPPTIGVFHYDADEKWSTNPDPTMNEFDLESIAVHEIGHLL 697
             H D S FDGPG T+AHA+ PT G FHYD DE WS    P  N  DLE++A+HEIGHLL
Sbjct: 224 LDHGDGSPFDGPGGTIAHAFAPTNGRFHYDGDETWSIGAVP--NAMDLETVALHEIGHLL 281

Query: 698 GLHHSSIPEAIMFDSIAAGATKRELHGDDVQGIR 799
           GL HSS+  AIMF SI+ G TK  LH DD+QGIR
Sbjct: 282 GLGHSSVQNAIMFPSISTGVTK-GLHEDDIQGIR 314


>ref|XP_002311052.1| predicted protein [Populus trichocarpa] gi|222850872|gb|EEE88419.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  285 bits (728), Expect = 1e-74
 Identities = 141/274 (51%), Positives = 188/274 (68%), Gaps = 8/274 (2%)
 Frame = +2

Query: 2   GCHKGQNVKGVNQVKQYLERFGYLHYNDHSG-----HANDDEFDDLLESAVKDYQLNHQL 166
           GCHK  +VKG++++K+YLE+FGYL Y  H G     HANDDEFDDLLESA+K YQ NH L
Sbjct: 40  GCHKNGSVKGLHELKRYLEKFGYLKYG-HQGKKGHNHANDDEFDDLLESAIKAYQQNHHL 98

Query: 167 KMTGSLNSKTLKQMMKPRCGVPDIINGATRMNSGKKKLQHGSLHTVSHFSFFPRRPTWPA 346
            +TGSL++ T+ +MM+PRCGVPD++NG    ++      H S+HT++H++F P    W  
Sbjct: 99  NVTGSLDNSTVHEMMQPRCGVPDVVNGTKHYHT------HKSIHTLAHYNFIPGNRRWA- 151

Query: 347 NRRSLIYTFRSGVEVIDLPTLRTVMSRAFAKWAAVTQFTFAEAQAGTTSDITIGFQRRAH 526
            +R L Y FRS V+V     +R++ ++AF +WA VT+FTF E    + +DI IGF R  H
Sbjct: 152 -KRQLTYKFRSSVQVPAAQNIRSICAKAFRRWAQVTEFTFQEVSVSSPADIVIGFHRGDH 210

Query: 527 DDNSAFDGPGVTVAHAYPP-TIGVFHYDADEKWSTNPDPTMNEFDLESIAVHEIGHLLGL 703
           +D  AFDGP   +AHA PP +  +FH+DADE WS NP P  N+ DLES+AVHEIGHLLGL
Sbjct: 211 NDGKAFDGPQGVLAHATPPASDAIFHFDADENWSENPGP--NQMDLESVAVHEIGHLLGL 268

Query: 704 HHSSIP--EAIMFDSIAAGATKRELHGDDVQGIR 799
            H+  P  +AIM   I +G  KR+L  DD+QG+R
Sbjct: 269 DHNDDPNADAIMSSGIPSGIAKRDLRADDIQGVR 302


>ref|XP_002280805.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
          Length = 321

 Score =  283 bits (723), Expect = 6e-74
 Identities = 145/273 (53%), Positives = 185/273 (67%), Gaps = 7/273 (2%)
 Frame = +2

Query: 2   GCHKGQNVKGVNQVKQYLERFGYLHYNDHSGHA----NDDEFDDLLESAVKDYQLNHQLK 169
           GC+K   VKG++++K+YLE+FGYL YN HS +     +DD FDDLLESA+K YQ N+ LK
Sbjct: 51  GCNKRDKVKGIHKLKKYLEQFGYLSYNSHSKNQIRTDDDDYFDDLLESAIKSYQTNYHLK 110

Query: 170 MTGSLNSKTLKQMMKPRCGVPDIINGATRMNSGKKKLQ--HGSLHTVSHFSFFPRRPTWP 343
            TG L+S+T+ +MM+ RCGV DI+NG + M S KK+    HGSLHTVSH+ FFP  P WP
Sbjct: 111 ATGKLDSETVSEMMRSRCGVADIVNGTSWMQSSKKRHDQGHGSLHTVSHYQFFPGSPRWP 170

Query: 344 -ANRRSLIYTFRSGVEVIDLPTLRTVMSRAFAKWAAVTQFTFAEAQAGTTSDITIGFQRR 520
            +N   L Y F  G         +  +SRAF KWA+ T FTFA+ +    +++TI F   
Sbjct: 171 TSNNAHLTYAFLPGTP----DEAKIPVSRAFGKWASATSFTFAQTEDHRNANLTISFHSL 226

Query: 521 AHDDNSAFDGPGVTVAHAYPPTIGVFHYDADEKWSTNPDPTMNEFDLESIAVHEIGHLLG 700
            H D + FDGPG T+AHAY PT G FHYDADE+WS    P     D+E++A+HEIGHLLG
Sbjct: 227 LHGDWNPFDGPGGTIAHAYAPTDGRFHYDADEEWSVGAVP--GALDVETVALHEIGHLLG 284

Query: 701 LHHSSIPEAIMFDSIAAGATKRELHGDDVQGIR 799
           L HSS+ EAIMF SI+ G TK  LH DD++GIR
Sbjct: 285 LGHSSVREAIMFPSISTGVTK-GLHRDDIEGIR 316


>emb|CAN73130.1| hypothetical protein VITISV_030258 [Vitis vinifera]
          Length = 437

 Score =  283 bits (723), Expect = 6e-74
 Identities = 145/273 (53%), Positives = 185/273 (67%), Gaps = 7/273 (2%)
 Frame = +2

Query: 2   GCHKGQNVKGVNQVKQYLERFGYLHYNDHSGHA----NDDEFDDLLESAVKDYQLNHQLK 169
           GC+K   VKG++++K+YLE+FGYL YN HS +     +DD FDDLLESA+K YQ N+ LK
Sbjct: 51  GCNKRDKVKGIHKLKKYLEQFGYLSYNSHSKNQIRTDDDDYFDDLLESAIKSYQTNYHLK 110

Query: 170 MTGSLNSKTLKQMMKPRCGVPDIINGATRMNSGKKKLQ--HGSLHTVSHFSFFPRRPTWP 343
            TG L+S+T+ +MM+ RCGV DI+NG + M S KK+    HGSLHTVSH+ FFP  P WP
Sbjct: 111 ATGKLDSETVSEMMRSRCGVADIVNGTSWMQSSKKRHDQGHGSLHTVSHYQFFPGSPRWP 170

Query: 344 -ANRRSLIYTFRSGVEVIDLPTLRTVMSRAFAKWAAVTQFTFAEAQAGTTSDITIGFQRR 520
            +N   L Y F  G         +  +SRAF KWA+ T FTFA+ +    +++TI F   
Sbjct: 171 TSNNAHLTYAFLPGTP----DEAKIPVSRAFGKWASATSFTFAQTEDHRNANLTISFHSL 226

Query: 521 AHDDNSAFDGPGVTVAHAYPPTIGVFHYDADEKWSTNPDPTMNEFDLESIAVHEIGHLLG 700
            H D + FDGPG T+AHAY PT G FHYDADE+WS    P     D+E++A+HEIGHLLG
Sbjct: 227 LHGDWNPFDGPGGTIAHAYAPTDGRFHYDADEEWSVGAVP--GXLDVETVALHEIGHLLG 284

Query: 701 LHHSSIPEAIMFDSIAAGATKRELHGDDVQGIR 799
           L HSS+ EAIMF SI+ G TK  LH DD++GIR
Sbjct: 285 LGHSSVREAIMFPSISTGVTK-GLHRDDIEGIR 316


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