BLASTX nr result

ID: Coptis23_contig00001962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001962
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338425.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
gb|ABK95950.1| unknown [Populus trichocarpa]                          112   2e-23
ref|XP_002319607.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002337555.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002311051.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20

>ref|XP_002338425.1| predicted protein [Populus trichocarpa] gi|222872207|gb|EEF09338.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = +3

Query: 3   RGAHGDVQSFDGPSPFGPILAHAFRPTIGLFHYDADESWSTNPTITEIDLESVAVHEIGH 182
           RG HGD   FDGP   G ILAHAF P  G FHYDADE WSTNP + +IDLESVAVHEIGH
Sbjct: 207 RGDHGDGYPFDGP---GKILAHAFSPENGRFHYDADEKWSTNPAMDQIDLESVAVHEIGH 263

Query: 183 LLGLGHSTIPSAIMFAALAPGQTKR 257
           LLGL HS+  +A+M+ ++A G  KR
Sbjct: 264 LLGLAHSSDSNAVMYPSIAAGTKKR 288


>gb|ABK95950.1| unknown [Populus trichocarpa]
          Length = 304

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = +3

Query: 3   RGAHGDVQSFDGPSPFGPILAHAFRPTIGLFHYDADESWSTNPTITEIDLESVAVHEIGH 182
           RG HGD   FDGP   G ILAHAF P  G FHYDADE WSTNP + +IDLESVAVHEIGH
Sbjct: 207 RGDHGDGYPFDGP---GKILAHAFSPENGRFHYDADEKWSTNPAMDQIDLESVAVHEIGH 263

Query: 183 LLGLGHSTIPSAIMFAALAPGQTKR 257
           LLGL HS+  +A+M+ ++A G  KR
Sbjct: 264 LLGLAHSSDSNAVMYPSIAAGTKKR 288


>ref|XP_002319607.1| predicted protein [Populus trichocarpa] gi|222857983|gb|EEE95530.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/84 (66%), Positives = 61/84 (72%)
 Frame = +3

Query: 6   GAHGDVQSFDGPSPFGPILAHAFRPTIGLFHYDADESWSTNPTITEIDLESVAVHEIGHL 185
           G HGD   FDGP   G ILAHAF PT G FHYDADE WSTNP+  E+DLESVAVHEIGHL
Sbjct: 70  GDHGDRYPFDGP---GRILAHAFAPTDGRFHYDADEKWSTNPSADEVDLESVAVHEIGHL 126

Query: 186 LGLGHSTIPSAIMFAALAPGQTKR 257
           LGL HS   ++IMFA +  G  KR
Sbjct: 127 LGLDHSMDQNSIMFAEIPQGTIKR 150


>ref|XP_002337555.1| predicted protein [Populus trichocarpa] gi|222839559|gb|EEE77896.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/84 (64%), Positives = 62/84 (73%)
 Frame = +3

Query: 6   GAHGDVQSFDGPSPFGPILAHAFRPTIGLFHYDADESWSTNPTITEIDLESVAVHEIGHL 185
           G HGD   FDGP   G ILAHAF P  G FHYDADE WSTNP + +IDLESVAVHEIGHL
Sbjct: 75  GDHGDGYPFDGP---GKILAHAFSPENGRFHYDADEKWSTNPAMDQIDLESVAVHEIGHL 131

Query: 186 LGLGHSTIPSAIMFAALAPGQTKR 257
           LGL HS+  +A+M+ ++A G  KR
Sbjct: 132 LGLAHSSDSNAVMYPSIAAGTKKR 155


>ref|XP_002311051.1| predicted protein [Populus trichocarpa] gi|222850871|gb|EEE88418.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/83 (62%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = +3

Query: 12  HGDVQSFDGPSPFGPILAHAFRPTIGLFHYDADESWSTNPTITEIDLESVAVHEIGHLLG 191
           HGD + FDGP   G I AH FRPTIG+ H+DADE+WS+NP   E+DLESVAVHEIGHL  
Sbjct: 67  HGDDEPFDGP---GGIFAHGFRPTIGMLHFDADETWSSNPGSLELDLESVAVHEIGHLPE 123

Query: 192 LGHS-TIPSAIMFAALAPGQTKR 257
           LGHS   P AIM+     G+TKR
Sbjct: 124 LGHSGDHPDAIMYPYFDYGKTKR 146


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