BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001955
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281726.1| PREDICTED: double-strand break repair protei...    39   7e-09
ref|XP_003539581.1| PREDICTED: double-strand break repair protei...    33   9e-07

>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis
           vinifera] gi|302143084|emb|CBI20379.3| unnamed protein
           product [Vitis vinifera]
          Length = 731

 Score = 39.3 bits (90), Expect(3) = 7e-09
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +2

Query: 248 DEDDMGSRLKKVQPRVTQNYGA 313
           DEDDM  RL K QPRVT+NYGA
Sbjct: 707 DEDDMSKRLNKPQPRVTRNYGA 728



 Score = 33.5 bits (75), Expect(3) = 7e-09
 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +3

Query: 150 GRKRVAPNG---STASSSKRGRKLDTFSFHRKLV 242
           GRKR AP G      +SSKRGRK D+ S  R L+
Sbjct: 666 GRKRAAPRGRGRGATTSSKRGRKSDSTSIQRMLM 699



 Score = 31.2 bits (69), Expect(3) = 7e-09
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 43  AMDEENSGSPSGDEVEEFDENEANDISENEASL 141
           A DE+N  S S DE  ++  NE +D SEN+ +L
Sbjct: 630 ADDEDNVESSSSDEAGKYGINEVDDSSENDENL 662


>ref|XP_003539581.1| PREDICTED: double-strand break repair protein MRE11-like [Glycine
           max]
          Length = 714

 Score = 32.7 bits (73), Expect(3) = 9e-07
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 49  DEENSGSPSGDEVEEFDENEANDISENEASLP 144
           D++N  S S D+  + D  E +D SENE++LP
Sbjct: 616 DDDNLASASSDDANKNDVEEIDDSSENESNLP 647



 Score = 32.7 bits (73), Expect(3) = 9e-07
 Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +3

Query: 150 GRKRVAPNG---STASSSKRGRKLDTFSFHRKLV 242
           G+KR A  G    +  SSKRGRK D  S HR LV
Sbjct: 648 GQKRAASKGRGRGSTQSSKRGRKSDNSSIHRMLV 681



 Score = 31.2 bits (69), Expect(3) = 9e-07
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +2

Query: 248 DEDDMGSRLKKVQPRVTQNYGA 313
           D+ D+  RL K QPRVT++YGA
Sbjct: 690 DDTDIRKRLNKSQPRVTKSYGA 711