BLASTX nr result

ID: Coptis23_contig00001952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001952
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282025.2| PREDICTED: uncharacterized protein LOC100257...   182   4e-44
ref|XP_004136460.1| PREDICTED: uncharacterized protein LOC101214...   167   1e-39
ref|XP_002324827.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_003603508.1| hypothetical protein MTR_3g108410 [Medicago ...   155   5e-36
ref|XP_002872175.1| hypothetical protein ARALYDRAFT_489418 [Arab...   152   3e-35

>ref|XP_002282025.2| PREDICTED: uncharacterized protein LOC100257807 [Vitis vinifera]
           gi|296081950|emb|CBI20955.3| unnamed protein product
           [Vitis vinifera]
          Length = 340

 Score =  182 bits (461), Expect = 4e-44
 Identities = 97/170 (57%), Positives = 116/170 (68%), Gaps = 2/170 (1%)
 Frame = -3

Query: 506 MAGKRARKRLVSKEKELVKNPIHQTPSLDLPDSEPVDV--VRSRLRQRWELASVLNFIRV 333
           M+G R R+    KE+ LVK    + P + L DS   +    R RLR+RWELASVLNF+ V
Sbjct: 1   MSGVRRRRDAAGKERRLVKTDNGEDPVI-LSDSLESETGSARIRLRERWELASVLNFLNV 59

Query: 332 FKPVIEAKLDISXXXXXXXXXTPNALLSQLHISLLKGIPPVSKNLTGSDAWVTVLCKKLA 153
           F+PVI +   IS          P++ ++QLHI LLKGIPPV+KNL GSDAWVTVLCKKL 
Sbjct: 60  FEPVIGSNSKISAEEIEMGLIKPDSPVAQLHIDLLKGIPPVNKNLNGSDAWVTVLCKKLT 119

Query: 152 SWWPWVAESEVPLKASNGEETSKYKELHPINRLLILKALCEIRAFQPDAV 3
            WWPWVAE E+PL A+ GEE ++YKEL P  RL ILKALCEIRA Q D V
Sbjct: 120 MWWPWVAEGEIPLTANKGEEINRYKELDPTIRLQILKALCEIRAEQNDTV 169


>ref|XP_004136460.1| PREDICTED: uncharacterized protein LOC101214697 [Cucumis sativus]
           gi|449505528|ref|XP_004162498.1| PREDICTED:
           uncharacterized LOC101214697 [Cucumis sativus]
          Length = 482

 Score =  167 bits (423), Expect = 1e-39
 Identities = 81/127 (63%), Positives = 95/127 (74%)
 Frame = -3

Query: 383 RLRQRWELASVLNFIRVFKPVIEAKLDISXXXXXXXXXTPNALLSQLHISLLKGIPPVSK 204
           +LR +WELASVLNF+ VF+PVI   L IS          P + L++LHI+LLKGIPPVSK
Sbjct: 42  KLRHKWELASVLNFLNVFEPVIGKSLRISAEEIEKGLIKPESSLAELHIALLKGIPPVSK 101

Query: 203 NLTGSDAWVTVLCKKLASWWPWVAESEVPLKASNGEETSKYKELHPINRLLILKALCEIR 24
            L GS+AWVTVLCKKLA WWPWVAE E+PLKA  GEE S YK+L P  RL++LKALCEIR
Sbjct: 102 MLNGSNAWVTVLCKKLAPWWPWVAEGEIPLKAFKGEEISNYKKLDPTKRLVLLKALCEIR 161

Query: 23  AFQPDAV 3
           A Q D +
Sbjct: 162 ADQDDTI 168


>ref|XP_002324827.1| predicted protein [Populus trichocarpa] gi|222866261|gb|EEF03392.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/125 (62%), Positives = 93/125 (74%)
 Frame = -3

Query: 383 RLRQRWELASVLNFIRVFKPVIEAKLDISXXXXXXXXXTPNALLSQLHISLLKGIPPVSK 204
           ++R RWELAS+LNF+ +F+PV+   L ++          PN  L+QLH+ LLKGIPPVS 
Sbjct: 25  KIRGRWELASILNFLSIFEPVLGVDLKLTAEEIESGLVKPNKSLAQLHVKLLKGIPPVSN 84

Query: 203 NLTGSDAWVTVLCKKLASWWPWVAESEVPLKASNGEETSKYKELHPINRLLILKALCEIR 24
            L  SDAWVT LCKKLA+WWPWVAE E+PLK + GEE S+YKEL P NRLLILKALCEIR
Sbjct: 85  KLKASDAWVTALCKKLATWWPWVAEGELPLKEAKGEEISEYKELDPTNRLLILKALCEIR 144

Query: 23  AFQPD 9
           A Q D
Sbjct: 145 AEQDD 149


>ref|XP_003603508.1| hypothetical protein MTR_3g108410 [Medicago truncatula]
           gi|355492556|gb|AES73759.1| hypothetical protein
           MTR_3g108410 [Medicago truncatula]
          Length = 486

 Score =  155 bits (391), Expect = 5e-36
 Identities = 76/127 (59%), Positives = 90/127 (70%)
 Frame = -3

Query: 383 RLRQRWELASVLNFIRVFKPVIEAKLDISXXXXXXXXXTPNALLSQLHISLLKGIPPVSK 204
           +LRQRWELASVL+F+ VF P++   L ++          PNA L+ LHI LLKGIPPV K
Sbjct: 25  KLRQRWELASVLHFLDVFSPLLGNDLKVTAEEIEIGLVKPNAFLTNLHIQLLKGIPPVGK 84

Query: 203 NLTGSDAWVTVLCKKLASWWPWVAESEVPLKASNGEETSKYKELHPINRLLILKALCEIR 24
            L  SD WVT L KKL +WWPWVAE + PL  S GEE SKYKEL P++RLL+LKALCE+R
Sbjct: 85  ALHDSDKWVTALSKKLTTWWPWVAEGKNPLVPSKGEEISKYKELDPLDRLLLLKALCEVR 144

Query: 23  AFQPDAV 3
           A Q D V
Sbjct: 145 ADQHDVV 151


>ref|XP_002872175.1| hypothetical protein ARALYDRAFT_489418 [Arabidopsis lyrata subsp.
           lyrata] gi|297318012|gb|EFH48434.1| hypothetical protein
           ARALYDRAFT_489418 [Arabidopsis lyrata subsp. lyrata]
          Length = 402

 Score =  152 bits (385), Expect = 3e-35
 Identities = 81/167 (48%), Positives = 103/167 (61%)
 Frame = -3

Query: 506 MAGKRARKRLVSKEKELVKNPIHQTPSLDLPDSEPVDVVRSRLRQRWELASVLNFIRVFK 327
           M   R RK +V++E E           L +  S   D     LR RWELASVLNF  VF 
Sbjct: 1   MVTLRQRKTVVTREPEPKMEEERLCEGLTILSS---DSAVKHLRGRWELASVLNFFNVFG 57

Query: 326 PVIEAKLDISXXXXXXXXXTPNALLSQLHISLLKGIPPVSKNLTGSDAWVTVLCKKLASW 147
           P++  KL ++           N   +QLHI+LLKGIPPV+K L  ++AW+TVLCKKLA W
Sbjct: 58  PLVSEKLKLTAEEIEMGLIESNTTNAQLHIALLKGIPPVNKTLDDANAWITVLCKKLAPW 117

Query: 146 WPWVAESEVPLKASNGEETSKYKELHPINRLLILKALCEIRAFQPDA 6
           WP +A+ E+P+ A+ GEE S+Y+ L PINRL ILKALCE+R  Q DA
Sbjct: 118 WPCIAKGEIPITANKGEEISEYQRLDPINRLKILKALCELRVQQDDA 164


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