BLASTX nr result

ID: Coptis23_contig00001946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001946
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera]    72   5e-11
ref|XP_002263816.2| PREDICTED: beta-amylase 1, chloroplastic-lik...    72   6e-11
gb|AFQ33615.1| beta-amylase 3 [Citrus trifoliata]                      70   1e-10
ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-lik...    69   3e-10
emb|CBI34544.3| unnamed protein product [Vitis vinifera]               68   9e-10

>emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera]
          Length = 542

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 SFKALALAXXXXXXXXXXXXXXERDAPLSYDWRSYLEIVALAKHFGLKVRAVMAFHSFGV 42
           SF+A+A A              ER+ P  Y+W+ Y+EIVALA+  GLKVR VMAFH  G 
Sbjct: 112 SFRAIAAAGVEGVVMEVWWGLVEREEPRVYNWQGYMEIVALARRXGLKVRVVMAFHQCGT 171

Query: 41  A-GDSCWIPLPHWV 3
             GD  WIPLP WV
Sbjct: 172 GPGDPSWIPLPQWV 185


>ref|XP_002263816.2| PREDICTED: beta-amylase 1, chloroplastic-like [Vitis vinifera]
          Length = 584

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 SFKALALAXXXXXXXXXXXXXXERDAPLSYDWRSYLEIVALAKHFGLKVRAVMAFHSFGV 42
           SF+A+A A              ER+ P  Y+W+ Y+EIVALA+  GLKVR VMAFH  G 
Sbjct: 154 SFRAIAAAGVEGVVMEVWWGLVEREEPRVYNWQGYMEIVALARRCGLKVRVVMAFHQCGT 213

Query: 41  A-GDSCWIPLPHWV 3
             GD  WIPLP WV
Sbjct: 214 GPGDPSWIPLPQWV 227


>gb|AFQ33615.1| beta-amylase 3 [Citrus trifoliata]
          Length = 541

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 SFKALALAXXXXXXXXXXXXXXERDAPLSYDWRSYLEIVALAKHFGLKVRAVMAFHSFGV 42
           SFKALA A              ERD P  YDWR Y +++ LA + GLKVRA++AFH  G 
Sbjct: 102 SFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGS 161

Query: 41  -AGDSCWIPLPHWV 3
            +GD  W+PLP WV
Sbjct: 162 GSGDPKWVPLPQWV 175


>ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 546

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 SFKALALAXXXXXXXXXXXXXXERDAPLSYDWRSYLEIVALAKHFGLKVRAVMAFHSFGV 42
           SF+ALA A              E D P +Y+W+ YLEIVA+A+ FGLKVRAV  F+  G+
Sbjct: 108 SFRALAAAGVEGVVIELWWGLVETDVPCNYNWKGYLEIVAMARRFGLKVRAVFTFNQHGL 167

Query: 41  A-GDSCWIPLPHWV 3
              D  WIPLP WV
Sbjct: 168 GPDDPHWIPLPKWV 181


>emb|CBI34544.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = -3

Query: 152 RDAPLSYDWRSYLEIVALAKHFGLKVRAVMAFHSFGVA-GDSCWIPLPHWV 3
           R+ P  Y+W+ Y+EIVALA+  GLKVR VMAFH  G   GD  WIPLP WV
Sbjct: 10  REEPRVYNWQGYMEIVALARRCGLKVRVVMAFHQCGTGPGDPSWIPLPQWV 60


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