BLASTX nr result

ID: Coptis23_contig00001944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001944
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|1...    55   6e-06

>ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|118482664|gb|ABK93251.1|
           unknown [Populus trichocarpa]
           gi|222839196|gb|EEE77547.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
 Frame = -2

Query: 189 NIPLTPIIKS------TVPSHICMASYQTVPASDRLISIISYFIPFLSGLSYGYHLFSYF 28
           N PLTP +K       +  S +   SY   PA+DRL+S +SY +PF + L YG  LF+ +
Sbjct: 28  NPPLTPFLKFPPKTRLSQKSTVTRMSYNPTPATDRLVSAVSYTLPFFNSLQYGRFLFTTY 87

Query: 27  PTLEFIFNP 1
           P+L  + +P
Sbjct: 88  PSLALLVDP 96


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