BLASTX nr result

ID: Coptis23_contig00001943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001943
         (2675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138665.1| PREDICTED: delta-aminolevulinic acid dehydra...   612   e-172
ref|XP_002513746.1| porphobilinogen synthase, putative [Ricinus ...   612   e-172
ref|XP_002285863.1| PREDICTED: delta-aminolevulinic acid dehydra...   607   e-171
prf||2114378A aminolevulinate dehydratase                             603   e-170
ref|XP_002300981.1| predicted protein [Populus trichocarpa] gi|2...   600   e-169

>ref|XP_004138665.1| PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic-like
            [Cucumis sativus]
          Length = 430

 Score =  612 bits (1579), Expect = e-172
 Identities = 310/381 (81%), Positives = 327/381 (85%), Gaps = 1/381 (0%)
 Frame = +2

Query: 221  VIKASGEHDV-AKKSGKSIQQCEADVVAGNXXXXXXXXXXXXXXXXXXVIPSFSLKXXXX 397
            V++AS E D   KK G+S  +CEA VVAGN                  V+P   L     
Sbjct: 50   VVRASEERDAHMKKLGRSDAECEAAVVAGNIPEAPPVPPKPASPAGTPVVPLLPLSRRPR 109

Query: 398  XXXXXXVLRAAFQETYLSPSHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAKAR 577
                   +RA+FQET LSPS+FVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEV+KAR
Sbjct: 110  RNRRSPAMRASFQETNLSPSNFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVSKAR 169

Query: 578  DVGVNSIVLFPKVPDALKTPTGDEAYNEDGLVPRAIRLLKDKYPDLVIYTDVALDPYSSD 757
            DVGVNS+VLFPKVPDALKTPTGDEAYN++GLVPR IRLLKDKYPDLVIYTDVALDPYSSD
Sbjct: 170  DVGVNSVVLFPKVPDALKTPTGDEAYNDNGLVPRTIRLLKDKYPDLVIYTDVALDPYSSD 229

Query: 758  GHDGIVREDGVIMNDETVHQLCKQAVAQARAGADVISPSDMMDGRVGAIREALDDEGFQD 937
            GHDGIVREDGVIMNDETVHQLCKQAV+QARAGADV+SPSDMMDGRVGAIR ALD EGF  
Sbjct: 230  GHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRRALDAEGFYH 289

Query: 938  VSIMSYTAKYASAFYGPFREALDSNPRFGDKKTYQMNPANYREALIETYADEDEGADILL 1117
            VSIMSYTAKYAS+FYGPFREALDSNPRFGDKKTYQMNPANYREALIET  DE EGADILL
Sbjct: 290  VSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALIETREDESEGADILL 349

Query: 1118 VKPGLPYLDVIRLLRDRSSLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAG 1297
            VKPGLPYLD+IRLLRD S LPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAG
Sbjct: 350  VKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAG 409

Query: 1298 ADIILTYFALQAGRCLCGEKR 1360
            ADIILTYFALQA RCLCGE+R
Sbjct: 410  ADIILTYFALQAARCLCGERR 430


>ref|XP_002513746.1| porphobilinogen synthase, putative [Ricinus communis]
            gi|223546832|gb|EEF48329.1| porphobilinogen synthase,
            putative [Ricinus communis]
          Length = 432

 Score =  612 bits (1579), Expect = e-172
 Identities = 317/432 (73%), Positives = 346/432 (80%), Gaps = 10/432 (2%)
 Frame = +2

Query: 95   NMACTTTV---------VGLRPNLKSINATTTTGCSIKLXXXXXXXXXXQMVIKASGEHD 247
            N ACT            V L+P + S+     T  S+K+           ++++AS  HD
Sbjct: 8    NAACTVPARKGLDCKNYVALKPTVHSLRFNCGTN-SVKVCPKRV------LMVRASERHD 60

Query: 248  -VAKKSGKSIQQCEADVVAGNXXXXXXXXXXXXXXXXXXVIPSFSLKXXXXXXXXXXVLR 424
               KK G +  +CEA VV+GN                  V+PS  L            +R
Sbjct: 61   GPIKKLGLTDAECEAAVVSGNVPEAPPVPPKPAAPAGTPVVPSLPLSRRPRRNRKSPAMR 120

Query: 425  AAFQETYLSPSHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAKARDVGVNSIVL 604
            A+FQET +SPS+FVYPLFIHEGEEDTPIGAMPGCYRLGWRHGL+EEVAKARDVGVNS+VL
Sbjct: 121  ASFQETNISPSNFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSVVL 180

Query: 605  FPKVPDALKTPTGDEAYNEDGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRED 784
            FPKVPDALK+PTGDEAYN++GLVPR IRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRED
Sbjct: 181  FPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRED 240

Query: 785  GVIMNDETVHQLCKQAVAQARAGADVISPSDMMDGRVGAIREALDDEGFQDVSIMSYTAK 964
            GVIMNDETVHQLCKQAV+QARAGADV+SPSDMMDGRVGAIR ALD EGFQ VSIMSYTAK
Sbjct: 241  GVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAK 300

Query: 965  YASAFYGPFREALDSNPRFGDKKTYQMNPANYREALIETYADEDEGADILLVKPGLPYLD 1144
            YAS+FYGPFREALDSNPRFGDKKTYQMNPANYREALIE + DE EGADILLVKPGLPYLD
Sbjct: 301  YASSFYGPFREALDSNPRFGDKKTYQMNPANYREALIEAHEDESEGADILLVKPGLPYLD 360

Query: 1145 VIRLLRDRSSLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAGADIILTYFA 1324
            +IRLLRD+S LPIAAYQVSGEYSMIKAGGVLKMIDEE+VMMESLMCLRRAGADIILTYFA
Sbjct: 361  IIRLLRDKSPLPIAAYQVSGEYSMIKAGGVLKMIDEERVMMESLMCLRRAGADIILTYFA 420

Query: 1325 LQAGRCLCGEKR 1360
            LQA RCLCGEKR
Sbjct: 421  LQAARCLCGEKR 432


>ref|XP_002285863.1| PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic
            [Vitis vinifera] gi|147778245|emb|CAN65137.1|
            hypothetical protein VITISV_011727 [Vitis vinifera]
            gi|302141802|emb|CBI19005.3| unnamed protein product
            [Vitis vinifera]
          Length = 430

 Score =  607 bits (1564), Expect = e-171
 Identities = 308/383 (80%), Positives = 327/383 (85%), Gaps = 1/383 (0%)
 Frame = +2

Query: 215  QMVIKASGEHDVA-KKSGKSIQQCEADVVAGNXXXXXXXXXXXXXXXXXXVIPSFSLKXX 391
            + +++AS   D + KK G + Q+CEA VVAGN                   +P   L   
Sbjct: 48   RFIVRASERRDESMKKMGLTDQECEAAVVAGNVPEAPPVPPKPAAPAGTPSVPFLPLNRR 107

Query: 392  XXXXXXXXVLRAAFQETYLSPSHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAK 571
                    VLRA+FQET LSP++FVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAK
Sbjct: 108  PRRNRRSPVLRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAK 167

Query: 572  ARDVGVNSIVLFPKVPDALKTPTGDEAYNEDGLVPRAIRLLKDKYPDLVIYTDVALDPYS 751
            ARDVGVNS+VLFPKVPDALK+PTGDEA+N++GLVPR IRLLKD+YPDLVIYTDVALDPYS
Sbjct: 168  ARDVGVNSVVLFPKVPDALKSPTGDEAFNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYS 227

Query: 752  SDGHDGIVREDGVIMNDETVHQLCKQAVAQARAGADVISPSDMMDGRVGAIREALDDEGF 931
            SDGHDGIVREDGVIMNDETVHQLCKQAVAQA+AGADV+SPSDMMDGRVGAIR ALD EGF
Sbjct: 228  SDGHDGIVREDGVIMNDETVHQLCKQAVAQAKAGADVVSPSDMMDGRVGAIRAALDAEGF 287

Query: 932  QDVSIMSYTAKYASAFYGPFREALDSNPRFGDKKTYQMNPANYREALIETYADEDEGADI 1111
            Q VSIMSYTAKYASAFYGPFREALDSNPRFGDKKTYQMNPANYREAL E   DE EGADI
Sbjct: 288  QHVSIMSYTAKYASAFYGPFREALDSNPRFGDKKTYQMNPANYREALTEVREDESEGADI 347

Query: 1112 LLVKPGLPYLDVIRLLRDRSSLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRR 1291
            LLVKPGLPYLDVIRLLRD SSLPIAAYQVSGEYSMIKAG VLKMIDEEKVMMESLMCLRR
Sbjct: 348  LLVKPGLPYLDVIRLLRDNSSLPIAAYQVSGEYSMIKAGAVLKMIDEEKVMMESLMCLRR 407

Query: 1292 AGADIILTYFALQAGRCLCGEKR 1360
            AGADIILTYFALQA RCLCGEKR
Sbjct: 408  AGADIILTYFALQAARCLCGEKR 430


>prf||2114378A aminolevulinate dehydratase
          Length = 430

 Score =  603 bits (1555), Expect = e-170
 Identities = 315/433 (72%), Positives = 340/433 (78%), Gaps = 7/433 (1%)
 Frame = +2

Query: 83   STLINMACTTTVVGLRPNLKSINATTTTGCSIKLXXXXXXXXXXQMVIKASGE-HDVA-- 253
            + ++N  C    V     LK          S+KL           + I+AS E HD    
Sbjct: 4    AAMLNAPCNIGAVKFEVKLKPSPNLFCARPSVKLNQRRV------LTIRASKEGHDNGSS 57

Query: 254  ----KKSGKSIQQCEADVVAGNXXXXXXXXXXXXXXXXXXVIPSFSLKXXXXXXXXXXVL 421
                +K G + ++CEA VVAGN                  ++ S  +             
Sbjct: 58   SGPLRKMGLTDEECEAAVVAGNVPEAPPVPPKPAAPDGTPIVSSLPINRRPRRNRRSSAA 117

Query: 422  RAAFQETYLSPSHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAKARDVGVNSIV 601
            RAAFQET +SP++ VYPLFIHEGEEDTPIGAMPGCYRLGWRHGL+EEVAKARDVGVNSIV
Sbjct: 118  RAAFQETNISPANLVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSIV 177

Query: 602  LFPKVPDALKTPTGDEAYNEDGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRE 781
            LFPKVPDALKT TGDEAYN++GLVPR IRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRE
Sbjct: 178  LFPKVPDALKTSTGDEAYNDNGLVPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRE 237

Query: 782  DGVIMNDETVHQLCKQAVAQARAGADVISPSDMMDGRVGAIREALDDEGFQDVSIMSYTA 961
            DGVIMNDETVHQLCKQAVAQARAGADV+SPSDMMDGRVGAIR ALD EGFQ VSIMSYTA
Sbjct: 238  DGVIMNDETVHQLCKQAVAQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTA 297

Query: 962  KYASAFYGPFREALDSNPRFGDKKTYQMNPANYREALIETYADEDEGADILLVKPGLPYL 1141
            KYAS+FYGPFREALDSNPRFGDKKTYQMNPANYREAL+E  ADE EGADILLVKPGLPYL
Sbjct: 298  KYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALVEMQADESEGADILLVKPGLPYL 357

Query: 1142 DVIRLLRDRSSLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAGADIILTYF 1321
            D+IRLLRD+S LPIAAYQVSGEYSMIKAGGVLKMIDEE+VMMESLMCLRRAGADIILTYF
Sbjct: 358  DIIRLLRDKSPLPIAAYQVSGEYSMIKAGGVLKMIDEERVMMESLMCLRRAGADIILTYF 417

Query: 1322 ALQAGRCLCGEKR 1360
            ALQAGRCLCGEKR
Sbjct: 418  ALQAGRCLCGEKR 430


>ref|XP_002300981.1| predicted protein [Populus trichocarpa] gi|222842707|gb|EEE80254.1|
            predicted protein [Populus trichocarpa]
          Length = 430

 Score =  600 bits (1546), Expect = e-169
 Identities = 313/439 (71%), Positives = 347/439 (79%), Gaps = 13/439 (2%)
 Frame = +2

Query: 83   STLINMACTTTVV------GLRPNLKSI------NATTTTGCSIKLXXXXXXXXXXQMVI 226
            S++ N  CT   V      GL+P + +         T+  GC  ++             +
Sbjct: 3    SSIFNAPCTVPAVKGKNYFGLKPAVNNDLRFNVGKKTSIIGCPKRV-----------FTV 51

Query: 227  KASGEHD-VAKKSGKSIQQCEADVVAGNXXXXXXXXXXXXXXXXXXVIPSFSLKXXXXXX 403
            +AS + D   KK G S  +CEA VVA N                  V+PS  L       
Sbjct: 52   RASEKKDGPIKKLGLSDAECEAAVVARNVPEAPPVPPRPAAPAGTPVVPSLPLSRRPRRN 111

Query: 404  XXXXVLRAAFQETYLSPSHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAKARDV 583
                V+RA+FQET +SP++FVYPLFIHEGEEDTPIGAMPGCYRLGWRHGL+EEVAKARDV
Sbjct: 112  RKSPVMRASFQETSISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDV 171

Query: 584  GVNSIVLFPKVPDALKTPTGDEAYNEDGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGH 763
            GVNSIVLFPKVPDALK+ TGDEAYN++GLVPRAI+LLKDKYPDLVIYTDVALDPYSSDGH
Sbjct: 172  GVNSIVLFPKVPDALKSSTGDEAYNDNGLVPRAIQLLKDKYPDLVIYTDVALDPYSSDGH 231

Query: 764  DGIVREDGVIMNDETVHQLCKQAVAQARAGADVISPSDMMDGRVGAIREALDDEGFQDVS 943
            DGIVREDGVIMNDETV+QLCKQAV+QARAGADV+SPSDMMDGRVGAIR+ALD EGFQ VS
Sbjct: 232  DGIVREDGVIMNDETVYQLCKQAVSQARAGADVVSPSDMMDGRVGAIRKALDAEGFQHVS 291

Query: 944  IMSYTAKYASAFYGPFREALDSNPRFGDKKTYQMNPANYREALIETYADEDEGADILLVK 1123
            IMSYTAKYAS+FYGPFREAL+S PRFGDKKTYQMNPANYREAL+E + DE EGADILLVK
Sbjct: 292  IMSYTAKYASSFYGPFREALESKPRFGDKKTYQMNPANYREALVEAHEDESEGADILLVK 351

Query: 1124 PGLPYLDVIRLLRDRSSLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAGAD 1303
            PGLPYLD+IRLLRD+S LPIAAYQVSGEYSMIKAGGVLKMIDEE+VMMESLMCLRRAGAD
Sbjct: 352  PGLPYLDIIRLLRDKSPLPIAAYQVSGEYSMIKAGGVLKMIDEERVMMESLMCLRRAGAD 411

Query: 1304 IILTYFALQAGRCLCGEKR 1360
            IILTYFALQA RCLCGEKR
Sbjct: 412  IILTYFALQAARCLCGEKR 430


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