BLASTX nr result

ID: Coptis23_contig00001941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001941
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634898.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...    90   2e-16
gb|ADP37190.1| sesquisabinene B synthase [Santalum album]              90   2e-16
emb|CAK55186.1| pinene synthase [Quercus ilex]                         90   2e-16
sp|Q93X23.1|MYRS_QUEIL RecName: Full=Myrcene synthase, chloropla...    86   4e-15
sp|E3W205.2|SAUBS_SANAS RecName: Full=Beta-bisabolene synthase; ...    84   1e-14

>ref|XP_003634898.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 600

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = +3

Query: 6   AFEGEDILDEAKDFTTTHLEE-IKTPTEIRLTKLVSHSLELPLHWRMLRYEARWYIDVCM 182
           + EGE +LDEA+DFT  HLE+ ++   +  L  LVSHSLELPLHWRMLR EARW+IDV  
Sbjct: 202 SMEGESVLDEARDFTKKHLEKSLEQSIDKNLAILVSHSLELPLHWRMLRIEARWFIDVHE 261

Query: 183 KEGDIDLDLLRFAILDF 233
           +  D+D  LL FA LD+
Sbjct: 262 RRQDMDPSLLEFAKLDY 278


>gb|ADP37190.1| sesquisabinene B synthase [Santalum album]
          Length = 566

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   LAFEGEDILDEAKDFTTTHLEEI--KTPTEIRLTKLVSHSLELPLHWRMLRYEARWYIDV 176
           L +EGEDILDEA+ F T+ L+ I  K P+   L K VSH+L+LPLHWR +RYEARW+ID 
Sbjct: 172 LGWEGEDILDEARTFATSKLKSIEGKIPSP-SLAKKVSHALDLPLHWRTIRYEARWFIDT 230

Query: 177 CMKEGDIDLDLLRFAILDF 233
             +E D++L LLR+A LDF
Sbjct: 231 YGEEEDVNLTLLRYAKLDF 249


>emb|CAK55186.1| pinene synthase [Quercus ilex]
          Length = 597

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = +3

Query: 12  EGEDILDEAKDFTTTHLEE-IKTPTEIRLTKLVSHSLELPLHWRMLRYEARWYIDVCMKE 188
           EGE+IL+EA+DF+T HLEE +K   E  L  LV+HSLELPLHWRMLR EARW+I++    
Sbjct: 205 EGENILEEARDFSTKHLEEYVKQNKEKNLATLVNHSLELPLHWRMLRLEARWFINIYRHN 264

Query: 189 GDIDLDLLRFAILDF 233
            D++  LL FA LDF
Sbjct: 265 QDVNPILLEFAELDF 279


>sp|Q93X23.1|MYRS_QUEIL RecName: Full=Myrcene synthase, chloroplastic; Flags: Precursor
           gi|14331015|emb|CAC41012.1| putative chloroplast terpene
           synthase [Quercus ilex]
          Length = 597

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
 Frame = +3

Query: 12  EGEDILDEAKDFTTTHLEE-IKTPTEIRLTKLVSHSLELPLHWRMLRYEARWYIDVCMKE 188
           EGE+IL+EA+DF+T HLEE +K   E  L  LV+HSLE PLHWRM R EARW+I++    
Sbjct: 205 EGENILEEARDFSTKHLEEYVKQNKEKNLATLVNHSLEFPLHWRMPRLEARWFINIYRHN 264

Query: 189 GDIDLDLLRFAILDF 233
            D++  LL FA LDF
Sbjct: 265 QDVNPILLEFAELDF 279


>sp|E3W205.2|SAUBS_SANAS RecName: Full=Beta-bisabolene synthase; Short=SauBS
           gi|333411331|gb|AEF32531.1| putative bisabolene synthase
           [Santalum austrocaledonicum]
          Length = 576

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   LAFEGEDILDEAKDFTTTHLEEIKTPTEIR-LTKLVSHSLELPLHWRMLRYEARWYIDVC 179
           L +EGED+LDEAK F+TT+L  +K       L +LV H+L LPLHW   RYEARW+ID  
Sbjct: 179 LGWEGEDLLDEAKKFSTTNLNNVKESISSNTLGRLVKHALNLPLHWSAARYEARWFIDEY 238

Query: 180 MKEGDIDLDLLRFAILDF 233
            KE +++ +LL++A LDF
Sbjct: 239 EKEENVNPNLLKYAKLDF 256


Top