BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001933
         (2093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi...   681   0.0  
ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|2...   652   0.0  
ref|XP_002521193.1| conserved hypothetical protein [Ricinus comm...   644   0.0  
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi...   627   e-177
ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   623   e-176

>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic [Vitis vinifera]
          Length = 511

 Score =  681 bits (1758), Expect = 0.0
 Identities = 338/445 (75%), Positives = 381/445 (85%)
 Frame = +2

Query: 290  KKNEFRSFGATELDRFLTSDEKDEMGEGFFEAIEELERMVREPADVLEEMNNKLSSRELQ 469
            K  EFR F + ELD+FLTSD++DEM EGFFEAIEELERM REP+DVLEEMN++LS+RELQ
Sbjct: 67   KIREFRLFKSVELDQFLTSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRLSARELQ 126

Query: 470  LVLVYFSQEGRDSWCALEVFEWLQKENKVDKETMELMVSIMCGWVRKLIEGEHSXXXXXX 649
            LVLVYFSQEGRDSWCALEVFEWL+KEN+VDKETMELMVSIMC WV+KLIEGEH       
Sbjct: 127  LVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEGEHDVGDVVD 186

Query: 650  XXXXXXXXXXKPSFSMIEKVISLYWEMGKKESGVLFVKDVLSRGIAYTVDDEENNKGGPT 829
                      KP FSMIEKVISLYWEM +KE  VLFVK+VL R IAY+ DD + +KGGPT
Sbjct: 187  LLVDMDCVGLKPGFSMIEKVISLYWEMEEKEKAVLFVKEVLRREIAYSEDDGDGHKGGPT 246

Query: 830  GYLAWKMMVDGNYLGAVKLVIDFRESGLKPEVYSYLIAMTAIVKELNEFSKAFRKLKGFV 1009
            GYLAWKMM +GNY GAVKLVI  RESGLKPEVYSYLIAMTA+VKELNEF+KA RKLKGF 
Sbjct: 247  GYLAWKMMAEGNYRGAVKLVIHLRESGLKPEVYSYLIAMTAVVKELNEFAKALRKLKGFT 306

Query: 1010 KAGSIPELDAENVWLIENYQSDLLSDGVRLSQWVIEEGSSLNSAVVHERLLAMYICAGEG 1189
            K+G I ELDAENV LIE YQSDLL+DGVRLS WVI+EG S    VV+ERLLAMYICAG G
Sbjct: 307  KSGLIAELDAENVELIEKYQSDLLADGVRLSSWVIQEGRSPLHGVVYERLLAMYICAGRG 366

Query: 1190 LKAEQQLWEMKLIGKEPERELYDIVLAICASQNEANSVSRLLTGLEVTSSIRRKKTLSWL 1369
            L+AE+QLWEMKL+GKE +RELYDIVLAICAS+ EA+++SRLLTG+EVTSSIRRKKTLSWL
Sbjct: 367  LEAERQLWEMKLVGKEADRELYDIVLAICASKKEASAISRLLTGMEVTSSIRRKKTLSWL 426

Query: 1370 LRGYVKGGHFQDASKTIIKMLDIGLHPEYLDRAAVLQGLRKAIQDTGSVEPYLSLCKYLS 1549
            LRGY+KG HF DAS+TIIKMLD+GL PEYLDRAAVLQGLR  IQ TG+VE YL LCK+LS
Sbjct: 427  LRGYIKGSHFDDASETIIKMLDLGLCPEYLDRAAVLQGLRNRIQQTGNVETYLKLCKHLS 486

Query: 1550 DADLIGPCLVYFYVDRYKLWVIKMV 1624
            DA+LIGPCLVY Y+ +YKLW++K +
Sbjct: 487  DANLIGPCLVYLYIKKYKLWILKTI 511


>ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|222850384|gb|EEE87931.1|
            predicted protein [Populus trichocarpa]
          Length = 500

 Score =  652 bits (1683), Expect = 0.0
 Identities = 321/456 (70%), Positives = 379/456 (83%), Gaps = 2/456 (0%)
 Frame = +2

Query: 263  KIPSLLFVK--KKNEFRSFGATELDRFLTSDEKDEMGEGFFEAIEELERMVREPADVLEE 436
            K P+ +  K  K  EFR F + ELD+++TSD+++EMGEGFFEAIEELERM REP+D+LEE
Sbjct: 45   KRPNFVVAKTTKVREFRLFKSVELDQYVTSDDEEEMGEGFFEAIEELERMTREPSDILEE 104

Query: 437  MNNKLSSRELQLVLVYFSQEGRDSWCALEVFEWLQKENKVDKETMELMVSIMCGWVRKLI 616
            MN++LS+RELQLVLVYFSQEGRDSWCALEVFEWL+KEN+VDKETMELMVSIMC WV+KLI
Sbjct: 105  MNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLI 164

Query: 617  EGEHSXXXXXXXXXXXXXXXXKPSFSMIEKVISLYWEMGKKESGVLFVKDVLSRGIAYTV 796
            EGE                  KPSFSMIEKVISLYW+MGKKE  V FVK+VL RGIAY+ 
Sbjct: 165  EGEQDVGDVVDLLVDMDCVGLKPSFSMIEKVISLYWDMGKKEGAVSFVKEVLRRGIAYSG 224

Query: 797  DDEENNKGGPTGYLAWKMMVDGNYLGAVKLVIDFRESGLKPEVYSYLIAMTAIVKELNEF 976
            DD E  KGGPTGYL WKMMVDGNY  AVKLVI  RESGLKPE+Y+YLIAMTA+VKELNEF
Sbjct: 225  DDGEGQKGGPTGYLTWKMMVDGNYRNAVKLVIHLRESGLKPEIYAYLIAMTAVVKELNEF 284

Query: 977  SKAFRKLKGFVKAGSIPELDAENVWLIENYQSDLLSDGVRLSQWVIEEGSSLNSAVVHER 1156
            SKA RKLKG+ ++G + ELDAENV L+E YQSDLL+DGV LS WVI+EGS     VVHER
Sbjct: 285  SKALRKLKGYSRSGMVTELDAENVELVEKYQSDLLADGVCLSSWVIQEGSPALYGVVHER 344

Query: 1157 LLAMYICAGEGLKAEQQLWEMKLIGKEPERELYDIVLAICASQNEANSVSRLLTGLEVTS 1336
            LLAMYICAG GL AE+QLWEMKL+GKE + +LYDIVLAICASQ EA++V+RLLT +EV S
Sbjct: 345  LLAMYICAGRGLDAERQLWEMKLVGKEADGDLYDIVLAICASQKEASAVARLLTRIEVAS 404

Query: 1337 SIRRKKTLSWLLRGYVKGGHFQDASKTIIKMLDIGLHPEYLDRAAVLQGLRKAIQDTGSV 1516
            S+R+KK+LSWLLRGY+KGGH+ +A++T+IKMLD+GL P+YLDR AV+QGLRK IQ  G+V
Sbjct: 405  SMRKKKSLSWLLRGYIKGGHYGEAAETLIKMLDLGLSPDYLDRVAVMQGLRKRIQQWGNV 464

Query: 1517 EPYLSLCKYLSDADLIGPCLVYFYVDRYKLWVIKMV 1624
            E YL LCK LSD +LIGP LVY Y+ +YKLW++K++
Sbjct: 465  ESYLKLCKRLSDVNLIGPSLVYLYIKKYKLWIMKLL 500


>ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
            gi|223539607|gb|EEF41193.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 499

 Score =  644 bits (1662), Expect = 0.0
 Identities = 318/445 (71%), Positives = 370/445 (83%)
 Frame = +2

Query: 290  KKNEFRSFGATELDRFLTSDEKDEMGEGFFEAIEELERMVREPADVLEEMNNKLSSRELQ 469
            +  EFR   + ELD+++ SD+++EM EGFFEAIEELERM REP+DVLEEMN+KLS+RELQ
Sbjct: 55   RNREFRVLKSVELDQYIASDDEEEMSEGFFEAIEELERMTREPSDVLEEMNDKLSARELQ 114

Query: 470  LVLVYFSQEGRDSWCALEVFEWLQKENKVDKETMELMVSIMCGWVRKLIEGEHSXXXXXX 649
            LVLVYFSQEGRDSWCALEVFEWL+KEN+VDKETMELMVSIMC W++KLIEGEH       
Sbjct: 115  LVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWIKKLIEGEHEIGDVVD 174

Query: 650  XXXXXXXXXXKPSFSMIEKVISLYWEMGKKESGVLFVKDVLSRGIAYTVDDEENNKGGPT 829
                      KPSFSMIEKVISLYWE+G+KE  V FVK+VL R +AY  DD E  KGGPT
Sbjct: 175  LLVDMDCVGLKPSFSMIEKVISLYWEIGEKEKSVSFVKEVLRREVAYFEDDGEGQKGGPT 234

Query: 830  GYLAWKMMVDGNYLGAVKLVIDFRESGLKPEVYSYLIAMTAIVKELNEFSKAFRKLKGFV 1009
            GYLAWKMMVDGNY  AVKLVI FRESGLKPEVYSYLIAMTA+VKELNEF+KA RKLKGF 
Sbjct: 235  GYLAWKMMVDGNYRDAVKLVIHFRESGLKPEVYSYLIAMTAVVKELNEFAKALRKLKGFA 294

Query: 1010 KAGSIPELDAENVWLIENYQSDLLSDGVRLSQWVIEEGSSLNSAVVHERLLAMYICAGEG 1189
            K+G I ELDAEN  LIE YQSDL++DGV LS WVI+EGS     VVHERLLAMYICAG G
Sbjct: 295  KSGLIAELDAENTRLIEKYQSDLIADGVCLSSWVIQEGSPSLYGVVHERLLAMYICAGRG 354

Query: 1190 LKAEQQLWEMKLIGKEPERELYDIVLAICASQNEANSVSRLLTGLEVTSSIRRKKTLSWL 1369
            L AE+QLWEMKL+GK  + +LYDIVLAICASQ EA++VSRLLT +EVTSS+++KKTLSWL
Sbjct: 355  LDAERQLWEMKLVGKHADGDLYDIVLAICASQKEASAVSRLLTRVEVTSSLQKKKTLSWL 414

Query: 1370 LRGYVKGGHFQDASKTIIKMLDIGLHPEYLDRAAVLQGLRKAIQDTGSVEPYLSLCKYLS 1549
            LRGY+KGG + +A++ ++KMLD+GL P+YLDR AVLQGLRK IQ  G+VE YL+LCK LS
Sbjct: 415  LRGYLKGGQYDEAAEALVKMLDMGLCPDYLDRVAVLQGLRKRIQQWGNVESYLNLCKRLS 474

Query: 1550 DADLIGPCLVYFYVDRYKLWVIKMV 1624
            D +LIGP LVY Y+ +YKLW++KM+
Sbjct: 475  DENLIGPSLVYLYIKKYKLWIMKML 499


>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic-like [Glycine max]
          Length = 508

 Score =  627 bits (1617), Expect = e-177
 Identities = 307/472 (65%), Positives = 384/472 (81%), Gaps = 2/472 (0%)
 Frame = +2

Query: 215  MKYYSCPRVEIKTSVLKIPSLLFVKKKN--EFRSFGATELDRFLTSDEKDEMGEGFFEAI 388
            +K+Y    +  ++   K PS +  K  +   FR+  + E+D+++TS+  DEM +GFFEAI
Sbjct: 41   LKFYG--GLSARSCKFKNPSFVSAKHGSLRGFRALKSVEMDQYVTSN--DEMSDGFFEAI 96

Query: 389  EELERMVREPADVLEEMNNKLSSRELQLVLVYFSQEGRDSWCALEVFEWLQKENKVDKET 568
            EELERM REP+DVLEEMN++LS+RELQLVLVYFSQ+GRDSWCALEVF+WL+KEN+VDKET
Sbjct: 97   EELERMTREPSDVLEEMNDRLSARELQLVLVYFSQDGRDSWCALEVFDWLRKENRVDKET 156

Query: 569  MELMVSIMCGWVRKLIEGEHSXXXXXXXXXXXXXXXXKPSFSMIEKVISLYWEMGKKESG 748
            MELMV+IMCGWV+KLI+ +H                 +P FSMIEKVISLYWEMG+KE  
Sbjct: 157  MELMVAIMCGWVKKLIQQQHGVGDVVDLLVDMDCVGLRPGFSMIEKVISLYWEMGEKEGA 216

Query: 749  VLFVKDVLSRGIAYTVDDEENNKGGPTGYLAWKMMVDGNYLGAVKLVIDFRESGLKPEVY 928
            VLFV++VL RGI Y  +DEE +KGGPTGYLAWKMM +G+Y  AV+LVI FRESGLKPE+Y
Sbjct: 217  VLFVEEVLRRGIPYVEEDEEGHKGGPTGYLAWKMMAEGDYRNAVRLVIRFRESGLKPEIY 276

Query: 929  SYLIAMTAIVKELNEFSKAFRKLKGFVKAGSIPELDAENVWLIENYQSDLLSDGVRLSQW 1108
            SYL+AMTA+VKELNEF+KA RKLKGF +AG + ELD E+V L E YQSD L+DGVRLS W
Sbjct: 277  SYLVAMTAVVKELNEFAKALRKLKGFTRAGLVAELDLEDVELTEKYQSDTLADGVRLSNW 336

Query: 1109 VIEEGSSLNSAVVHERLLAMYICAGEGLKAEQQLWEMKLIGKEPERELYDIVLAICASQN 1288
            VI++GS     +VHERLLAMYICAG G++AE+QLWEMKL+GKE + +LYDIVLAICASQ 
Sbjct: 337  VIQDGSPSLHGIVHERLLAMYICAGHGIEAERQLWEMKLVGKEADGDLYDIVLAICASQK 396

Query: 1289 EANSVSRLLTGLEVTSSIRRKKTLSWLLRGYVKGGHFQDASKTIIKMLDIGLHPEYLDRA 1468
            E+N+ +RLLT LEV SS ++KK+LSWLLRGY+KGGHF +A++TI+KML++G +PEYLDRA
Sbjct: 397  ESNATARLLTRLEVVSSPQKKKSLSWLLRGYIKGGHFNEAAETIMKMLELGFYPEYLDRA 456

Query: 1469 AVLQGLRKAIQDTGSVEPYLSLCKYLSDADLIGPCLVYFYVDRYKLWVIKMV 1624
            AVLQGLRK IQ  G+++ Y+ LCK LSDA+LIGPCLV+ Y+ +YKLWV+KM+
Sbjct: 457  AVLQGLRKRIQQYGNLDTYVRLCKSLSDANLIGPCLVHLYIRKYKLWVVKML 508


>ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g30100, chloroplastic-like [Cucumis sativus]
          Length = 501

 Score =  623 bits (1606), Expect = e-176
 Identities = 298/445 (66%), Positives = 368/445 (82%)
 Frame = +2

Query: 290  KKNEFRSFGATELDRFLTSDEKDEMGEGFFEAIEELERMVREPADVLEEMNNKLSSRELQ 469
            K  + R F + ELD+F+TSD++DEMG+GFFEAIEELERM REP+DVLEEMN++LS+RE+Q
Sbjct: 57   KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQ 116

Query: 470  LVLVYFSQEGRDSWCALEVFEWLQKENKVDKETMELMVSIMCGWVRKLIEGEHSXXXXXX 649
            LVLVYFSQEGRDSWCALEVFEWLQKEN+VDKETMELMVSIMC W++KL+EG H+      
Sbjct: 117  LVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGRHNVGDVVD 176

Query: 650  XXXXXXXXXXKPSFSMIEKVISLYWEMGKKESGVLFVKDVLSRGIAYTVDDEENNKGGPT 829
                      KP FSMIEKVISLYWEMG+KE  V FVK+VL R +A+  DD E +KGGP+
Sbjct: 177  LLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAVFFVKEVLGRNLAFMKDDWEGHKGGPS 236

Query: 830  GYLAWKMMVDGNYLGAVKLVIDFRESGLKPEVYSYLIAMTAIVKELNEFSKAFRKLKGFV 1009
            GYLAWKMMVDG+Y GAVK+V+  RESGL+PEVYSYLIAMTA+VKELNEF+KA RKLKG+ 
Sbjct: 237  GYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKGYA 296

Query: 1010 KAGSIPELDAENVWLIENYQSDLLSDGVRLSQWVIEEGSSLNSAVVHERLLAMYICAGEG 1189
            + G + ELD  NV L+  YQ++LL+DGV+LS WV+EEGSS    VVHERLLAMYICAG+G
Sbjct: 297  RDGFVAELDKNNVELVAKYQTELLADGVQLSNWVLEEGSSSIRGVVHERLLAMYICAGQG 356

Query: 1190 LKAEQQLWEMKLIGKEPERELYDIVLAICASQNEANSVSRLLTGLEVTSSIRRKKTLSWL 1369
            ++AE+QLWEMKL+GKE + +LYDIVLAICASQ E  ++ RLLT +E+TS + +KK+L+WL
Sbjct: 357  VEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMIKKKSLTWL 416

Query: 1370 LRGYVKGGHFQDASKTIIKMLDIGLHPEYLDRAAVLQGLRKAIQDTGSVEPYLSLCKYLS 1549
            LRGY+KGGHF+DA+ T++KM+++G  PEYLDR AVLQGL K I++  SV  YL LCK LS
Sbjct: 417  LRGYIKGGHFRDAAGTLVKMINLGFLPEYLDRVAVLQGLXKEIREPESVHTYLDLCKCLS 476

Query: 1550 DADLIGPCLVYFYVDRYKLWVIKMV 1624
            DA+LIGP LVY ++ ++KLW+IKM+
Sbjct: 477  DANLIGPSLVYLHLQKHKLWIIKML 501