BLASTX nr result

ID: Coptis23_contig00001932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001932
         (1563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546989.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   196   1e-47
ref|XP_003543562.1| PREDICTED: uncharacterized protein LOC100813...   192   3e-46
ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, ...   189   2e-45
ref|XP_003597516.1| FAR1-related protein [Medicago truncatula] g...   184   7e-44
ref|XP_002270370.2| PREDICTED: uncharacterized protein LOC100248...   183   1e-43

>ref|XP_003546989.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 259

 Score =  196 bits (498), Expect = 1e-47
 Identities = 112/256 (43%), Positives = 156/256 (60%), Gaps = 8/256 (3%)
 Frame = +3

Query: 165 ENTSGLNSELMDSDRNVECGSLNELV-----TVEECDDTSENERTADPPAEGLPIKVVAS 329
           ++  G +S+  D D   E    +E V      +E C    E+E   + P   +   + A 
Sbjct: 4   QSGQGFDSDDSDLDMQAEISDKHEKVDEFSKNLEICG--GEDEMFVEQPVADISTDIEAV 61

Query: 330 EPYVGMEFESADGAREYYDVYGRRNGFTIXXXXXXXXXXXXXXIGFDYVCSKEGFRRKRR 509
           EP++GMEF S + ARE+Y  YGRR GFT+              IG D+VCSKEGFR K+ 
Sbjct: 62  EPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 121

Query: 510 L-REDATIRLSKQTRVGCKAMLVIAYRRDMEKWVVTNFLREHNHELMVPSEVPVRTVGP- 683
           L R+D  +     TR GC+AM+ +A  RD  KWVVT F++EH H+LM PS+VP R  G  
Sbjct: 122 LHRKDRVLPPPPATREGCQAMIRLAL-RDRGKWVVTKFVKEHTHKLMSPSKVPCRGSGKH 180

Query: 684 -LNEDEKDKKIRELTTKLYNERQRFQRQCAAYEERCAAYRVQIGKILNDIETHNDHLTRK 860
            ++EDEKDK+IREL+ +LYNERQ+ +R+CAAYEE       Q+  ILND+E H +H+++K
Sbjct: 181 LVSEDEKDKRIRELSLELYNERQKCKRRCAAYEE-------QLNVILNDLEKHTEHISKK 233

Query: 861 VDNIVQSIKEVEVEDS 908
           V  +V+SI+E+E E S
Sbjct: 234 VAAVVRSIREIEEEKS 249


>ref|XP_003543562.1| PREDICTED: uncharacterized protein LOC100813124 [Glycine max]
          Length = 256

 Score =  192 bits (487), Expect = 3e-46
 Identities = 110/256 (42%), Positives = 152/256 (59%), Gaps = 8/256 (3%)
 Frame = +3

Query: 165 ENTSGLNSELMDSDRNVECGSLNELV-----TVEECDDTSENERTADPPAEGLPIKVVAS 329
           ++  G NS+  D D   E    ++ V      +E C    E     + P   +   + A 
Sbjct: 4   QSGQGFNSDDSDLDMQAEISEKHKKVDEFSKNLELCGSEDEMFVEIEQPLANISTDIEAV 63

Query: 330 EPYVGMEFESADGAREYYDVYGRRNGFTIXXXXXXXXXXXXXXIGFDYVCSKEGFRRKRR 509
           EP++GMEF S + ARE+Y  YGRR GFT+              IG D+VCSKEGFR K+ 
Sbjct: 64  EPFIGMEFNSREEAREFYIAYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 123

Query: 510 L-REDATIRLSKQTRVGCKAMLVIAYRRDMEKWVVTNFLREHNHELMVPSEVPVRTVGP- 683
           + R D  +     TR GC+AM+ +A  RD  KWVVT F++EH H+LM PS+VP R  G  
Sbjct: 124 VHRRDRVLPPPPATREGCQAMIRLAL-RDGGKWVVTKFVKEHTHKLMSPSKVPWRGSGKH 182

Query: 684 -LNEDEKDKKIRELTTKLYNERQRFQRQCAAYEERCAAYRVQIGKILNDIETHNDHLTRK 860
            ++EDEKDK+IREL+ +LYNERQ+ +R+CAAYEE       Q+  ILND+E H +H++ K
Sbjct: 183 LVSEDEKDKRIRELSLELYNERQKCKRRCAAYEE-------QLNMILNDLEKHTEHISEK 235

Query: 861 VDNIVQSIKEVEVEDS 908
           V  +V+SI+E+E E S
Sbjct: 236 VAAVVRSIREIEEEIS 251


>ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, partial [Vitis
           vinifera]
          Length = 244

 Score =  189 bits (480), Expect = 2e-45
 Identities = 113/252 (44%), Positives = 152/252 (60%), Gaps = 5/252 (1%)
 Frame = +3

Query: 162 MENTS--GLNSELMDSDRNVECGSLNELVTVEECDDTSENERTADPPAEGLPIKVVASEP 335
           MEN S  G +S+  D D   E    +E +  +  ++        D   E   I     EP
Sbjct: 1   MENPSSLGFDSDESDPDMQAEAYEDHERIEDKLPNNLDLCAGEDDKIVEQSVINREVLEP 60

Query: 336 YVGMEFESADGAREYYDVYGRRNGFTIXXXXXXXXXXXXXXIGFDYVCSKEGFRRKRRL- 512
           Y+GMEF S D ARE+Y  YGRR GFT+              IG D+VCSKEGFR K+ + 
Sbjct: 61  YIGMEFNSRDEAREFYVAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVY 120

Query: 513 REDATIRLSKQTRVGCKAMLVIAYRRDMEKWVVTNFLREHNHELMVPSEVPVRTVGP--L 686
           R+D  +     TR GC+AM+ +A  RD  KWVVT F++EH+H+LM PS+VP R  G   +
Sbjct: 121 RKDRVLPPPPITREGCQAMIRLAL-RDGAKWVVTKFVKEHSHKLMSPSKVPWRGSGKHLV 179

Query: 687 NEDEKDKKIRELTTKLYNERQRFQRQCAAYEERCAAYRVQIGKILNDIETHNDHLTRKVD 866
           +EDEKDK+IREL+ +L NERQ+ +R+CAAYEE       Q+  IL D+E H +H++RKV 
Sbjct: 180 SEDEKDKRIRELSLELNNERQKCKRRCAAYEE-------QLNMILKDLEKHTEHMSRKVS 232

Query: 867 NIVQSIKEVEVE 902
           +IVQSI+E+E E
Sbjct: 233 DIVQSIREIEEE 244


>ref|XP_003597516.1| FAR1-related protein [Medicago truncatula]
           gi|355486564|gb|AES67767.1| FAR1-related protein
           [Medicago truncatula]
          Length = 252

 Score =  184 bits (466), Expect = 7e-44
 Identities = 106/255 (41%), Positives = 154/255 (60%), Gaps = 7/255 (2%)
 Frame = +3

Query: 165 ENTSGLNSELMDSDRNVECGSLNELVTVEECDD----TSENERTADPPAEGLPIKVVASE 332
           ++  G +S+  D D   E    +E V  E  +     T E++   + P           E
Sbjct: 5   QSGQGFDSDGSDFDVLAEISEKHEKVEDEFTNSLELCTGEDKEFVEQPVADSD----TLE 60

Query: 333 PYVGMEFESADGAREYYDVYGRRNGFTIXXXXXXXXXXXXXXIGFDYVCSKEGFRRKRRL 512
           P++GM+F S + AR +YD YGRR GFT+              IG D+VCSKEGFR K+ +
Sbjct: 61  PFIGMQFNSREEARGFYDGYGRRIGFTVRIHHNRRSRVNNELIGQDFVCSKEGFRAKKYV 120

Query: 513 -REDATIRLSKQTRVGCKAMLVIAYRRDMEKWVVTNFLREHNHELMVPSEVPVRTVGP-- 683
            R+D  +     TR GC+AM+ +A  RD  KWVVT F++EH H+LM P EVP R  G   
Sbjct: 121 HRKDRVLPPPPATREGCQAMIRLAL-RDEGKWVVTKFVKEHTHKLMSPGEVPWRGSGKHL 179

Query: 684 LNEDEKDKKIRELTTKLYNERQRFQRQCAAYEERCAAYRVQIGKILNDIETHNDHLTRKV 863
           ++EDEKD++IREL+ +L+NERQ+++R+CAAYEE       Q+  ILND+E H +H+++KV
Sbjct: 180 VSEDEKDRRIRELSLELHNERQKYKRRCAAYEE-------QLNTILNDLEKHTEHISKKV 232

Query: 864 DNIVQSIKEVEVEDS 908
            ++VQ+I+E+E E S
Sbjct: 233 ADVVQNIREIEEEKS 247


>ref|XP_002270370.2| PREDICTED: uncharacterized protein LOC100248330 [Vitis vinifera]
          Length = 471

 Score =  183 bits (464), Expect = 1e-43
 Identities = 109/261 (41%), Positives = 154/261 (59%), Gaps = 14/261 (5%)
 Frame = +3

Query: 162 MENTSGLNSELMDSDRNVECGSLNELVTVEECDDTSEN-----------ERTADPPAEGL 308
           ME+TS    +  + DR ++  S NE    ++   T+ N           +  A P + G 
Sbjct: 221 MESTSSQAIDSDEGDRCLQVESYNEHELADDEPSTNGNLHIGGEDKTLAQSVASPHSIGN 280

Query: 309 PIKVVASEPYVGMEFESADGAREYYDVYGRRNGFTIXXXXXXXXXXXXXXIGFDYVCSKE 488
            +     EPYVGMEF+S + ARE+Y  YGR  GFT+              IG D+VCS+E
Sbjct: 281 NV-----EPYVGMEFKSREDAREFYIAYGRHTGFTVRIHHNRRSRINNNVIGQDFVCSRE 335

Query: 489 GFRRKRRL-REDATIRLSKQTRVGCKAMLVIAYRRDMEKWVVTNFLREHNHELMVPSEVP 665
           GFR K+ + R+D  +     TR GC AML +A  RD  KWV+T F++EHNH+LM PS+VP
Sbjct: 336 GFREKKYIYRKDRILPPPPVTREGCPAMLRVAI-RDGPKWVITKFVKEHNHKLMSPSKVP 394

Query: 666 VRTVGP--LNEDEKDKKIRELTTKLYNERQRFQRQCAAYEERCAAYRVQIGKILNDIETH 839
            R  G   ++EDEKD++I+ELT +LYNERQ+ +R CAAY+E       Q+  +L DIE H
Sbjct: 395 WRGSGKNFVSEDEKDQRIQELTLELYNERQKCKRLCAAYQE-------QLRLVLKDIEEH 447

Query: 840 NDHLTRKVDNIVQSIKEVEVE 902
            DHL+R V++ VQ ++++E E
Sbjct: 448 TDHLSRGVEDAVQKVRDLENE 468



 Score =  106 bits (265), Expect = 1e-20
 Identities = 64/193 (33%), Positives = 104/193 (53%)
 Frame = +3

Query: 330 EPYVGMEFESADGAREYYDVYGRRNGFTIXXXXXXXXXXXXXXIGFDYVCSKEGFRRKRR 509
           EP VGMEF+S D A+E+YD Y RR GF +              +     C+K+GF  K R
Sbjct: 24  EPCVGMEFDSEDAAKEFYDEYARRVGFIMRIDQCRRSEVDKRILSRRLSCNKQGFYVKIR 83

Query: 510 LREDATIRLSKQTRVGCKAMLVIAYRRDMEKWVVTNFLREHNHELMVPSEVPVRTVGPLN 689
            +     +    TR GCKAM+++   +   KWVVT F+++H H L+V S  P R+    +
Sbjct: 84  DQYGPVRKPRPSTRQGCKAMMLVKLNKS-GKWVVTRFVKDHTHPLVVSSR-PSRS----S 137

Query: 690 EDEKDKKIRELTTKLYNERQRFQRQCAAYEERCAAYRVQIGKILNDIETHNDHLTRKVDN 869
            D KD++I+ELT ++ ++           ++ C  YR Q+   L ++E   + L+ K++ 
Sbjct: 138 MDSKDRRIQELTMEVEHQ-----------DQLCELYRGQLITFLKNVEEQTEVLSTKIEV 186

Query: 870 IVQSIKEVEVEDS 908
            V S+++VE E++
Sbjct: 187 AVNSVRKVESEET 199


Top