BLASTX nr result
ID: Coptis23_contig00001929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00001929 (1723 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 823 0.0 ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho... 823 0.0 gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de... 814 0.0 gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu... 812 0.0 ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 812 0.0 >ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera] Length = 1109 Score = 823 bits (2127), Expect = 0.0 Identities = 416/575 (72%), Positives = 474/575 (82%), Gaps = 1/575 (0%) Frame = +2 Query: 2 FKVNSLVQNGCLAGPTLDIAFFRLVHPQYVPIAHIERALERLCQLKDCCYEPIRWLNEQY 181 FK+N+LVQNGCL+GPTLD FFR V PQ + I+ IE ALE+L L++CCYEP+RWL+EQY Sbjct: 274 FKINTLVQNGCLSGPTLDTNFFRWVDPQRINISFIEHALEKLYYLEECCYEPVRWLHEQY 333 Query: 182 LKYRTSKTLIRARSTSLDDGLVYIRRVRVTPSKVYFCEPDVNLSNRVIRHFHEYIDNFIR 361 Y SK + + + SLD GLVY+RRV++TP KVYFC P+VN+SNRV+R++ E IDNF+R Sbjct: 334 RTY-ISKQVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLR 392 Query: 362 VSFYDEDWEKMRSTDLSPRATSKNEDRRHTSIYKRILSTLRNGIVIGDKKFEFLAFSSSQ 541 VSF DE+ EK+ ST +SPR + NE RR T +Y+RILS L+NGIVIGDKKF+FLA SSSQ Sbjct: 393 VSFLDENSEKIHSTVISPRMS--NEGRR-TGVYRRILSILQNGIVIGDKKFDFLAVSSSQ 449 Query: 542 LRDNSAWMFASENGLTAGTIRKWMGHFHEIRNVAKYAARLGQSFSSSRETLTVDRHEIEV 721 LRDNSAWMFAS GLTA IR MG F +IRNVAKYAARLGQSFSSS+ETL V +HEIE+ Sbjct: 450 LRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEI 509 Query: 722 IPDVEVGRNGKRYVFSDGIGKISVEFARRVAKKCGVNGFTPSSFQIRYGGYKGVVAVDPT 901 IPD+E R+G YVFSDGIGKIS E A RVA KCG TPS+FQIRYGGYKGVVAVDPT Sbjct: 510 IPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDPT 569 Query: 902 SVMKLSLRKSMSKYISRNTKLDVLSWSKYQPCFLNRQLISLLSTLGVKDHIFEKKQKEAV 1081 S KLSLRKSM KY S NT LDVLSWSKY+PCFLNRQLI+LLSTLGVKDH+FEKKQ+EAV Sbjct: 570 SSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREAV 629 Query: 1082 DQLDLILTDPSMALEALEVMSPGENVSVLKEMLMCGYKPDIEPFLSMMLQTFRALKLLEL 1261 DQLD IL DP A EALE+MSPGEN ++LKEMLMCGYKPD EPFLSMMLQTFRA KLLEL Sbjct: 630 DQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLSMMLQTFRAAKLLEL 689 Query: 1262 RKKTRIFVPNGRAMMGCLDENRMLEYGQVFVQFSHI-GPQRFQGNTPFTTSINKSDQRKS 1438 R KTRIFVPNGR+MMGCLDE R LEYG+VFVQ S G Q F + F S + D Sbjct: 690 RTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFYGSGSHHD--NF 747 Query: 1439 IVKGRVIVAKNPCLHPGDVRVLQAVDIPALHHLVDCVVFPQKGARPHPNECSGSDLDGDI 1618 I++G+V+VAKNPCLHPGDVR+L AVD+PALHH+VDCVVFPQKG RPHP+ECSGSDLDGDI Sbjct: 748 ILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDLDGDI 807 Query: 1619 YFVSWDHELIPPRQIDPMDYTPEPTVTLDHDVTIE 1723 YFV WDH+LIPPRQI+PMDYTP PT LDHDV IE Sbjct: 808 YFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIE 842 >ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa] gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase [Populus trichocarpa] Length = 1133 Score = 823 bits (2125), Expect = 0.0 Identities = 409/575 (71%), Positives = 474/575 (82%), Gaps = 1/575 (0%) Frame = +2 Query: 2 FKVNSLVQNGCLAGPTLDIAFFRLVHPQYVPIAHIERALERLCQLKDCCYEPIRWLNEQY 181 F+VN LVQNGCLAG LD F+RLV P +P+ IE ALE+L LK+CCYEP +W NEQY Sbjct: 284 FRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQY 343 Query: 182 LKYRTSKTLIRARSTSLDDGLVYIRRVRVTPSKVYFCEPDVNLSNRVIRHFHEYIDNFIR 361 KY TS R+ SLD GLVY+ +V++TP KV+FC P+VN+SNRV+R + E IDNF+R Sbjct: 344 KKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLR 403 Query: 362 VSFYDEDWEKMRSTDLSPRATSKNEDRRHTSIYKRILSTLRNGIVIGDKKFEFLAFSSSQ 541 VSF DE+ EK+ STD+SPR +S+NE RR T+IY RILSTL+NGIVIGDKKFEFLAFSSSQ Sbjct: 404 VSFVDEELEKIHSTDVSPRTSSRNELRR-TAIYNRILSTLQNGIVIGDKKFEFLAFSSSQ 462 Query: 542 LRDNSAWMFASENGLTAGTIRKWMGHFHEIRNVAKYAARLGQSFSSSRETLTVDRHEIEV 721 LR+NS WMFAS GLTA IR WMG FH+IRNVA+YAARLGQSF SS ETL+V HEIE+ Sbjct: 463 LRENSCWMFASRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEI 522 Query: 722 IPDVEVGRNGKRYVFSDGIGKISVEFARRVAKKCGVNGFTPSSFQIRYGGYKGVVAVDPT 901 IPD+EV R G RY+FSDGIGKIS EFAR+VA KCG GFTPS+FQIRY GYKGVVAVDPT Sbjct: 523 IPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPT 582 Query: 902 SVMKLSLRKSMSKYISRNTKLDVLSWSKYQPCFLNRQLISLLSTLGVKDHIFEKKQKEAV 1081 S KLSLR+SM KY S NTKLDVL+ SKYQPCFLNRQLI+LLSTLGV DH FE+KQ+EAV Sbjct: 583 SSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAV 642 Query: 1082 DQLDLILTDPSMALEALEVMSPGENVSVLKEMLMCGYKPDIEPFLSMMLQTFRALKLLEL 1261 DQLD +LTDP A EALE+MSPGEN ++LKEML+CGY+PD EPFLSMMLQTFRA KLLEL Sbjct: 643 DQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLEL 702 Query: 1262 RKKTRIFVPNGRAMMGCLDENRMLEYGQVFVQFSHIGPQRFQGNTPFTTSINKSDQRKS- 1438 R KTRIF+PNGR+MMGCLDE R LE+GQVFV+FS RF+ + ++ + + Sbjct: 703 RTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFS---GSRFRNLYDSSDMFSERGRGQCY 759 Query: 1439 IVKGRVIVAKNPCLHPGDVRVLQAVDIPALHHLVDCVVFPQKGARPHPNECSGSDLDGDI 1618 ++KG V+VAKNPCLHPGD+R+L+AVD+PALHH+VDCVVFPQKG RPHPNECSGSDLDGDI Sbjct: 760 LIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDI 819 Query: 1619 YFVSWDHELIPPRQIDPMDYTPEPTVTLDHDVTIE 1723 YFV WD ELIP +QI PMDYTPEP + LDHDVTIE Sbjct: 820 YFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIE 854 >gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum] Length = 1180 Score = 814 bits (2103), Expect = 0.0 Identities = 406/575 (70%), Positives = 474/575 (82%), Gaps = 1/575 (0%) Frame = +2 Query: 2 FKVNSLVQNGCLAGPTLDIAFFRLVHPQYVPIAHIERALERLCQLKDCCYEPIRWLNEQY 181 FK++SLVQ+GC+ GP LD+ FFRLV PQ +A IE+ALE+L LK+CCY+P+RWL EQY Sbjct: 240 FKISSLVQHGCIPGPALDVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQY 299 Query: 182 LKYRTSKTLIRARSTSLDDGLVYIRRVRVTPSKVYFCEPDVNLSNRVIRHFHEYIDNFIR 361 Y + ++ S +LDDGLVY+RRV VTP KVYFC P+VN+SNRV+R++ E IDNF+R Sbjct: 300 DGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLR 359 Query: 362 VSFYDEDWEKMRSTDLSPRATSKNEDRRHTSIYKRILSTLRNGIVIGDKKFEFLAFSSSQ 541 VSF DE+WEK+ STDL P+A++ N R T+IY+RILSTLR G VIGDKKFEFLAFSSSQ Sbjct: 360 VSFVDEEWEKLYSTDLLPKASTGNGIR--TNIYERILSTLRKGFVIGDKKFEFLAFSSSQ 417 Query: 542 LRDNSAWMFASENGLTAGTIRKWMGHFHEIRNVAKYAARLGQSFSSSRETLTVDRHEIEV 721 LRDNS WMFAS GLTA IR WMG F +I+NVAKYAARLGQSF SS+ETL+V RHEIEV Sbjct: 418 LRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVLRHEIEV 477 Query: 722 IPDVEVGRNGKRYVFSDGIGKISVEFARRVAKKCGVNGFTPSSFQIRYGGYKGVVAVDPT 901 IPDV+V +G YVFSDGIGKIS +FARRVA KCG+ +TPS+FQIRYGGYKGVVAVDP Sbjct: 478 IPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQ-YTPSAFQIRYGGYKGVVAVDPY 534 Query: 902 SVMKLSLRKSMSKYISRNTKLDVLSWSKYQPCFLNRQLISLLSTLGVKDHIFEKKQKEAV 1081 S MKLSLRKSMSKY S N KLDVL WSKYQPC+LNRQL++LLSTLGVKD + E+KQKEAV Sbjct: 535 SSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAV 594 Query: 1082 DQLDLILTDPSMALEALEVMSPGENVSVLKEMLMCGYKPDIEPFLSMMLQTFRALKLLEL 1261 DQLD IL D A EALE+MSPGEN ++LK ML CGY PD EPFLSMMLQTFRA KLL+L Sbjct: 595 DQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDL 654 Query: 1262 RKKTRIFVPNGRAMMGCLDENRMLEYGQVFVQFSHIGPQRFQGNT-PFTTSINKSDQRKS 1438 R ++RIF+PNGRAMMGCLDE+R LEYGQVFVQF+ G + F + PF S +S Sbjct: 655 RTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLHPFNNS--RSTNCNF 712 Query: 1439 IVKGRVIVAKNPCLHPGDVRVLQAVDIPALHHLVDCVVFPQKGARPHPNECSGSDLDGDI 1618 I+KG V+VAKNPCLHPGD+RVL+AVD+PALHH+VDCVVFPQKG RPHPNECSGSDLDGDI Sbjct: 713 ILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDI 772 Query: 1619 YFVSWDHELIPPRQIDPMDYTPEPTVTLDHDVTIE 1723 YFV WD ++IPPRQ+ PM+Y P P++ LDHDVTIE Sbjct: 773 YFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIE 807 >gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum] Length = 841 Score = 812 bits (2098), Expect = 0.0 Identities = 405/575 (70%), Positives = 474/575 (82%), Gaps = 1/575 (0%) Frame = +2 Query: 2 FKVNSLVQNGCLAGPTLDIAFFRLVHPQYVPIAHIERALERLCQLKDCCYEPIRWLNEQY 181 FK++SLVQ+GC+ GP L++ FFRLV PQ +A IE+ALE+L LK+CCY+P+RWL EQY Sbjct: 274 FKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQY 333 Query: 182 LKYRTSKTLIRARSTSLDDGLVYIRRVRVTPSKVYFCEPDVNLSNRVIRHFHEYIDNFIR 361 Y + ++ S +LDDGLVY+RRV VTP KVYFC P+VN+SNRV+R++ E IDNF+R Sbjct: 334 DGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLR 393 Query: 362 VSFYDEDWEKMRSTDLSPRATSKNEDRRHTSIYKRILSTLRNGIVIGDKKFEFLAFSSSQ 541 VSF DE+WEK+ STDL P+A++ N R T+IY+RILSTLR G VIGDKKFEFLAFSSSQ Sbjct: 394 VSFVDEEWEKLYSTDLLPKASTGNGIR--TNIYERILSTLRKGFVIGDKKFEFLAFSSSQ 451 Query: 542 LRDNSAWMFASENGLTAGTIRKWMGHFHEIRNVAKYAARLGQSFSSSRETLTVDRHEIEV 721 LRDNS WMFAS GLTA IR WMG F +I+NVAKYAARLGQSF SS+ETL+V RHEIEV Sbjct: 452 LRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVLRHEIEV 511 Query: 722 IPDVEVGRNGKRYVFSDGIGKISVEFARRVAKKCGVNGFTPSSFQIRYGGYKGVVAVDPT 901 IPDV+V +G YVFSDGIGKIS +FARRVA KCG+ +TPS+FQIRYGGYKGVVAVDP Sbjct: 512 IPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQ-YTPSAFQIRYGGYKGVVAVDPY 568 Query: 902 SVMKLSLRKSMSKYISRNTKLDVLSWSKYQPCFLNRQLISLLSTLGVKDHIFEKKQKEAV 1081 S MKLSLRKSMSKY S N KLDVL WSKYQPC+LNRQL++LLSTLGVKD + E+KQKEAV Sbjct: 569 SSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAV 628 Query: 1082 DQLDLILTDPSMALEALEVMSPGENVSVLKEMLMCGYKPDIEPFLSMMLQTFRALKLLEL 1261 DQLD IL D A EALE+MSPGEN ++LK ML CGY PD EPFLSMMLQTFRA KLL+L Sbjct: 629 DQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDL 688 Query: 1262 RKKTRIFVPNGRAMMGCLDENRMLEYGQVFVQFSHIGPQRFQGNT-PFTTSINKSDQRKS 1438 R ++RIF+PNGRAMMGCLDE+R LEYGQVFVQF+ G + F + PF S +S Sbjct: 689 RTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLHPFNNS--RSTNCNF 746 Query: 1439 IVKGRVIVAKNPCLHPGDVRVLQAVDIPALHHLVDCVVFPQKGARPHPNECSGSDLDGDI 1618 I+KG V+VAKNPCLHPGD+RVL+AVD+PALHH+VDCVVFPQKG RPHPNECSGSDLDGDI Sbjct: 747 ILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDI 806 Query: 1619 YFVSWDHELIPPRQIDPMDYTPEPTVTLDHDVTIE 1723 YFV WD ++IPPRQ+ PM+Y P P++ LDHDVTIE Sbjct: 807 YFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIE 841 >ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera] Length = 1121 Score = 812 bits (2097), Expect = 0.0 Identities = 408/575 (70%), Positives = 468/575 (81%), Gaps = 1/575 (0%) Frame = +2 Query: 2 FKVNSLVQNGCLAGPTLDIAFFRLVHPQYVPIAHIERALERLCQLKDCCYEPIRWLNEQY 181 FK+N+LVQNGCL+GPTLD +FFRLV P+ PI+ IE ALE+L LK+CCYEP+RWL+EQY Sbjct: 276 FKINTLVQNGCLSGPTLDTSFFRLVDPERFPISFIEHALEKLYHLKECCYEPVRWLSEQY 335 Query: 182 LKYRTSKTLIRARSTSLDDGLVYIRRVRVTPSKVYFCEPDVNLSNRVIRHFHEYIDNFIR 361 Y K + + + SLD GLVY+RRV++TP KVYFC P+VN+SNRV+R++ E IDNF+R Sbjct: 336 RTY-VKKPVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLR 394 Query: 362 VSFYDEDWEKMRSTDLSPRATSKNEDRRHTSIYKRILSTLRNGIVIGDKKFEFLAFSSSQ 541 VSF DE+ EK+ ST +SPR + + R T +Y+RILS L+NGIVIGDKKF+FLAFSSSQ Sbjct: 395 VSFLDENLEKIHSTVISPRMSKEG---RRTGVYRRILSILQNGIVIGDKKFDFLAFSSSQ 451 Query: 542 LRDNSAWMFASENGLTAGTIRKWMGHFHEIRNVAKYAARLGQSFSSSRETLTVDRHEIEV 721 LRDNSAWMFAS GLTA IR WMG F +IRNVAKYAARLGQSFSSS+ETL V + EIE Sbjct: 452 LRDNSAWMFASRPGLTAAEIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIEN 511 Query: 722 IPDVEVGRNGKRYVFSDGIGKISVEFARRVAKKCGVNGFTPSSFQIRYGGYKGVVAVDPT 901 IPD+E+ + YVFSDGIGKIS + A RVA KCG TPS+FQIRYGGYKGVVAVDPT Sbjct: 512 IPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDPT 571 Query: 902 SVMKLSLRKSMSKYISRNTKLDVLSWSKYQPCFLNRQLISLLSTLGVKDHIFEKKQKEAV 1081 S KLSLRKSM KY S NT LDVL+WSKYQP FLNRQLI+LLSTLGVKDH+FEKKQ+ AV Sbjct: 572 SSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLGVKDHVFEKKQRAAV 631 Query: 1082 DQLDLILTDPSMALEALEVMSPGENVSVLKEMLMCGYKPDIEPFLSMMLQTFRALKLLEL 1261 DQLD IL DP A EALE+MSPGEN +VLKEMLMCGYKPD EPFLSMMLQTFRA KLLEL Sbjct: 632 DQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLSMMLQTFRAAKLLEL 691 Query: 1262 RKKTRIFVPNGRAMMGCLDENRMLEYGQVFVQFSHI-GPQRFQGNTPFTTSINKSDQRKS 1438 R KTRIFVPNGR+MMGCLDE R LEYG+VFVQ S G Q F + F S + D Sbjct: 692 RTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFRGSGSHHD--NF 749 Query: 1439 IVKGRVIVAKNPCLHPGDVRVLQAVDIPALHHLVDCVVFPQKGARPHPNECSGSDLDGDI 1618 I++G+++VAKNPCLHPGDVRVL AV++P LHH+VDCVVFPQKG RPHPNECSGSDLDGDI Sbjct: 750 ILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDI 809 Query: 1619 YFVSWDHELIPPRQIDPMDYTPEPTVTLDHDVTIE 1723 YFV WD +LIPP+QI+PMDYTP PT LDHDV IE Sbjct: 810 YFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIE 844