BLASTX nr result

ID: Coptis23_contig00001926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001926
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37809.3| unnamed protein product [Vitis vinifera]               75   4e-12
emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    74   1e-11
ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800...    63   2e-08
ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805...    63   2e-08
gb|AFK36768.1| unknown [Lotus japonicus]                               57   1e-06

>emb|CBI37809.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27  EELHKYIIRVDDPDGDGNCGY*AMCIALGRS*KESPWMRNKLLQELNDKLPLYCTLYTHS 206
           E L  YI+ V D   DGNCG+  +  A+G   +  P +R  +L EL      Y  L+   
Sbjct: 479 EGLQPYIMHVKDVAADGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWAEYAQLFRDP 538

Query: 207 -EVSFVKSIISHACG*APYNKWMTMPFVGYLFVSRFNVVLIHLGNMYCHLILPLRT 371
             V  +  ++ H    A Y++WMTMP +G++  SR+NVVL+++    C   LPLR+
Sbjct: 539 IRVDELIHVLEHFQSPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRS 594


>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27  EELHKYIIRVDDPDGDGNCGY*AMCIALGRS*KESPWMRNKLLQELNDKLPLYCTLYTHS 206
           E L  YI+ V D   DGNCG+  +  A+G   +  P +R  +L EL      Y  L+   
Sbjct: 577 EGLQPYIMHVKDVAADGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWDEYAQLFRDP 636

Query: 207 -EVSFVKSIISHACG*APYNKWMTMPFVGYLFVSRFNVVLIHLGNMYCHLILPLRT 371
             V  +   + H    A Y++WMTMP +G++  SR+NVVL+++    C   LPLR+
Sbjct: 637 IRVDELIHXLEHFQSPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRS 692


>ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800409 [Glycine max]
          Length = 877

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
 Frame = +3

Query: 30   ELHKYIIRVDDPDGDGNCGY*AMCIALGRS*KESPWMRNKLLQELNDKLPLYCTLY-THS 206
            E+H +I  + D  GD NCGY A+   LG   +    +R  L++EL      Y  L+ ++ 
Sbjct: 685  EIHPFIEDIIDVKGDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAKLFGSND 744

Query: 207  EVSFVKSIISHACG*APYNKWMTMPFVGYLFVSRFNVVLIHLGNMYCHLILPLR 368
             V+ ++  + +    A    WMT+P +GY+  SR+NVVL+ L    C    PLR
Sbjct: 745  RVAELRQSL-YVGKQASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLR 797


>ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805365 [Glycine max]
          Length = 878

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
 Frame = +3

Query: 30   ELHKYIIRVDDPDGDGNCGY*AMCIALGRS*KESPWMRNKLLQELNDKLPLYCTLY-THS 206
            E+H +I  + D  GD NCGY A+   LG   +    +R  L++EL      Y  L+ ++ 
Sbjct: 686  EIHPFIEDIIDVKGDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAKLFGSND 745

Query: 207  EVSFVKSIISHACG*APYNKWMTMPFVGYLFVSRFNVVLIHLGNMYCHLILPLR 368
             V+ ++  + +    A    WMT+P +GY+  SR+NVVL+ L    C    PLR
Sbjct: 746  RVAELRKSL-YVGKQASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLR 798


>gb|AFK36768.1| unknown [Lotus japonicus]
          Length = 179

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
 Frame = +3

Query: 30  ELHKYIIRVDDPDGDGNCGY*AMCIALGRS*KESPWMRNKLLQELNDKLPLYCTLYTHSE 209
           ELH YI  + D   DGNCG+ A+   LG+       +R  L +EL +    Y  LY   E
Sbjct: 40  ELHCYINDIIDVVPDGNCGFRALAALLGQEEHNWAQIRIDLAKELQEFHHEYVALYGSIE 99

Query: 210 V--SFVKSIISHACG*APYNKWMTMPFVGYLFVSRFNVVLIHLGNMYCHLILPLR 368
                + S+ +        +KWM++P +GYL  ++F +V + L N  C    PLR
Sbjct: 100 RVNQLLDSLYTIPGMLVTPDKWMSLPDMGYLIATKFKLVFLVLSNCGCITFFPLR 154


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