BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001925
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [...   180   e-100
ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [V...   182   1e-99
ref|XP_002266488.1| PREDICTED: proteasome subunit beta type-6 [V...   177   1e-97
gb|AFK42116.1| unknown [Lotus japonicus]                              176   1e-96
ref|XP_003522675.1| PREDICTED: proteasome subunit beta type-6-li...   176   5e-96

>ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
           gi|223532621|gb|EEF34407.1| proteasome subunit beta type
           6,9, putative [Ricinus communis]
          Length = 231

 Score =  180 bits (457), Expect(3) = e-100
 Identities = 86/102 (84%), Positives = 95/102 (93%)
 Frame = +3

Query: 342 LLSYSNKNMLETGLIVGGWDKYEGGKIYSVPLGGTILEQPFAIXXXXXXYLYGFFDQAWK 521
           L+SY+NKNMLETGLIVGGWDKY+GGKIY +PLGGTI+EQPFAI      YLYGFFDQAWK
Sbjct: 95  LISYNNKNMLETGLIVGGWDKYDGGKIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWK 154

Query: 522 DGMTKDEAEKLVVKAVSLAIARDGASGGVVRTVIINSDGVTR 647
           +GMTKDEAE+LVVKAVSLA+ARDGASGGVVRTVIINS+GVTR
Sbjct: 155 EGMTKDEAEQLVVKAVSLAMARDGASGGVVRTVIINSEGVTR 196



 Score =  159 bits (403), Expect(3) = e-100
 Identities = 77/83 (92%), Positives = 81/83 (97%)
 Frame = +1

Query: 28  MDTNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAA 207
           MD  APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSAA
Sbjct: 1   MDLKAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 60

Query: 208 DSQVVSDYVRHFLYQHTIQLGQP 276
           DSQ+VSDYVR+FL+QHTIQLGQP
Sbjct: 61  DSQIVSDYVRYFLHQHTIQLGQP 83



 Score = 72.4 bits (176), Expect(3) = e-100
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = +1

Query: 712 SDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPMS 831
           S+GVTRNFYPGD+LPLWH+ELEP  SLLDIL++ SPEPM+
Sbjct: 191 SEGVTRNFYPGDSLPLWHEELEPQNSLLDILNASSPEPMN 230


>ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
          Length = 231

 Score =  182 bits (462), Expect(3) = 1e-99
 Identities = 87/102 (85%), Positives = 96/102 (94%)
 Frame = +3

Query: 342 LLSYSNKNMLETGLIVGGWDKYEGGKIYSVPLGGTILEQPFAIXXXXXXYLYGFFDQAWK 521
           L+SY+NKNMLETGLIVGGWDKYEGGKIY++PLGGTI+EQPFAI      YLYGFFDQAWK
Sbjct: 95  LVSYNNKNMLETGLIVGGWDKYEGGKIYAIPLGGTIIEQPFAIGGSGSTYLYGFFDQAWK 154

Query: 522 DGMTKDEAEKLVVKAVSLAIARDGASGGVVRTVIINSDGVTR 647
           +GMTKDEAE+LVVKAVSLAIARDGASGGV+RTVIINS+GVTR
Sbjct: 155 EGMTKDEAEQLVVKAVSLAIARDGASGGVIRTVIINSEGVTR 196



 Score =  161 bits (407), Expect(3) = 1e-99
 Identities = 77/83 (92%), Positives = 82/83 (98%)
 Frame = +1

Query: 28  MDTNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAA 207
           MD NAPH+MGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSAA
Sbjct: 1   MDLNAPHTMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA 60

Query: 208 DSQVVSDYVRHFLYQHTIQLGQP 276
           DSQ+VSDYVR+FL+QHTIQLGQP
Sbjct: 61  DSQIVSDYVRYFLHQHTIQLGQP 83



 Score = 68.2 bits (165), Expect(3) = 1e-99
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +1

Query: 712 SDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPMS 831
           S+GVTRNFYPGD+LPLWH+EL P  SLL++L S SPEPM+
Sbjct: 191 SEGVTRNFYPGDSLPLWHEELPPQNSLLELLHSSSPEPMN 230


>ref|XP_002266488.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
           gi|297736018|emb|CBI24056.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  177 bits (449), Expect(3) = 1e-97
 Identities = 86/102 (84%), Positives = 93/102 (91%)
 Frame = +3

Query: 342 LLSYSNKNMLETGLIVGGWDKYEGGKIYSVPLGGTILEQPFAIXXXXXXYLYGFFDQAWK 521
           L+SY+NKNML+TGLIVGGWDK+EGGKIY VPLGGTILEQPFAI      YLYGFFDQ WK
Sbjct: 96  LISYNNKNMLQTGLIVGGWDKHEGGKIYGVPLGGTILEQPFAIGGSGSSYLYGFFDQEWK 155

Query: 522 DGMTKDEAEKLVVKAVSLAIARDGASGGVVRTVIINSDGVTR 647
           +GMTKDEAEKLVVKAVSLAIARDGASGGVVRTV INS+GVT+
Sbjct: 156 EGMTKDEAEKLVVKAVSLAIARDGASGGVVRTVTINSEGVTK 197



 Score =  153 bits (387), Expect(3) = 1e-97
 Identities = 73/80 (91%), Positives = 79/80 (98%)
 Frame = +1

Query: 37  NAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAADSQ 216
           N PHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVYLCRSGSAADSQ
Sbjct: 5   NQPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQ 64

Query: 217 VVSDYVRHFLYQHTIQLGQP 276
           ++SDYVR++L+QHTIQLGQP
Sbjct: 65  ILSDYVRYYLHQHTIQLGQP 84



 Score = 74.7 bits (182), Expect(3) = 1e-97
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 712 SDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPM 828
           S+GVT+NFYPGDTLPLWH+ELEP  SLLDILSS SPEPM
Sbjct: 192 SEGVTKNFYPGDTLPLWHEELEPQNSLLDILSSSSPEPM 230


>gb|AFK42116.1| unknown [Lotus japonicus]
          Length = 233

 Score =  176 bits (445), Expect(3) = 1e-96
 Identities = 86/102 (84%), Positives = 92/102 (90%)
 Frame = +3

Query: 342 LLSYSNKNMLETGLIVGGWDKYEGGKIYSVPLGGTILEQPFAIXXXXXXYLYGFFDQAWK 521
           LLSY+NKN LETGLIVGGWDKYEGG+I+ VPLGGTI++QPFAI      YLYGFFDQAWK
Sbjct: 99  LLSYNNKNFLETGLIVGGWDKYEGGQIFGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWK 158

Query: 522 DGMTKDEAEKLVVKAVSLAIARDGASGGVVRTVIINSDGVTR 647
           DGMTKDEAE LV KAVSLAIARDGASGGVVRTVIINS+GVTR
Sbjct: 159 DGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTR 200



 Score =  159 bits (402), Expect(3) = 1e-96
 Identities = 77/84 (91%), Positives = 82/84 (97%)
 Frame = +1

Query: 25  NMDTNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSA 204
           N D +APHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSGSA
Sbjct: 4   NFDLSAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSA 63

Query: 205 ADSQVVSDYVRHFLYQHTIQLGQP 276
           ADSQVVSDYVR+FL+QHTIQLGQP
Sbjct: 64  ADSQVVSDYVRYFLHQHTIQLGQP 87



 Score = 67.0 bits (162), Expect(3) = 1e-96
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 712 SDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPMS 831
           S+GVTRNFYPGD LPLWH+ELEP  SLLDIL  G+PEPM+
Sbjct: 195 SEGVTRNFYPGDQLPLWHEELEPQNSLLDIL--GAPEPMN 232


>ref|XP_003522675.1| PREDICTED: proteasome subunit beta type-6-like [Glycine max]
          Length = 233

 Score =  176 bits (445), Expect(3) = 5e-96
 Identities = 86/102 (84%), Positives = 92/102 (90%)
 Frame = +3

Query: 342 LLSYSNKNMLETGLIVGGWDKYEGGKIYSVPLGGTILEQPFAIXXXXXXYLYGFFDQAWK 521
           LLSY+NKN LETGLIVGGWDKYEGG+IY VPLGGTI++QPFAI      YLYGFFDQAWK
Sbjct: 99  LLSYNNKNFLETGLIVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWK 158

Query: 522 DGMTKDEAEKLVVKAVSLAIARDGASGGVVRTVIINSDGVTR 647
           +GMTKDEAE LV KAVSLAIARDGASGGVVRTVIINS+GVTR
Sbjct: 159 EGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTR 200



 Score =  156 bits (395), Expect(3) = 5e-96
 Identities = 75/83 (90%), Positives = 82/83 (98%)
 Frame = +1

Query: 28  MDTNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAA 207
           +D +APHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSGSAA
Sbjct: 5   VDFSAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAA 64

Query: 208 DSQVVSDYVRHFLYQHTIQLGQP 276
           DSQ+VSDYVR+FL+QHTIQLGQP
Sbjct: 65  DSQIVSDYVRYFLHQHTIQLGQP 87



 Score = 67.4 bits (163), Expect(3) = 5e-96
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 712 SDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPMS 831
           S+GVTRNFYPGD LPLWH+E+EP  SLLDIL  G+PEPMS
Sbjct: 195 SEGVTRNFYPGDQLPLWHEEMEPHNSLLDIL--GAPEPMS 232