BLASTX nr result

ID: Coptis23_contig00001924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001924
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282270.1| PREDICTED: uncharacterized protein LOC100249...   204   5e-50
gb|AFK48585.1| unknown [Lotus japonicus]                              184   3e-44
ref|XP_002322889.1| predicted protein [Populus trichocarpa] gi|1...   180   8e-43
ref|NP_001237061.1| uncharacterized protein LOC100527253 [Glycin...   177   4e-42
ref|XP_002519498.1| conserved hypothetical protein [Ricinus comm...   174   4e-41

>ref|XP_002282270.1| PREDICTED: uncharacterized protein LOC100249954 isoform 1 [Vitis
           vinifera] gi|359481400|ref|XP_003632615.1| PREDICTED:
           uncharacterized protein LOC100249954 isoform 2 [Vitis
           vinifera] gi|297741640|emb|CBI32772.3| unnamed protein
           product [Vitis vinifera]
          Length = 99

 Score =  204 bits (518), Expect = 5e-50
 Identities = 83/99 (83%), Positives = 94/99 (94%)
 Frame = +2

Query: 65  MERFFGNAYRGDPGVPHTDPERFVNIWIGSVAFSATSWFHPYMWQLSNQYNWHDRAMLFE 244
           ME++FGNAYRGDPGVPH DP+RFVNIWIGS+AFSA +W +PYMWQLSNQ+NWHD+AMLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHADPDRFVNIWIGSIAFSALTWVNPYMWQLSNQFNWHDKAMLFE 60

Query: 245 QHHWKKALKKGQPYQFKWNQYMDKDLRESYYFNWPVYFP 361
           QHHWKKAL K QPY+FKWNQYMD+DLR+SYYFNWPVYFP
Sbjct: 61  QHHWKKALAKKQPYKFKWNQYMDRDLRDSYYFNWPVYFP 99


>gb|AFK48585.1| unknown [Lotus japonicus]
          Length = 99

 Score =  184 bits (468), Expect = 3e-44
 Identities = 74/99 (74%), Positives = 88/99 (88%)
 Frame = +2

Query: 65  MERFFGNAYRGDPGVPHTDPERFVNIWIGSVAFSATSWFHPYMWQLSNQYNWHDRAMLFE 244
           ME++FGNAYRGDPGVPH DPERFV IWIG+ AFS  ++ +PYMWQLSNQYNWHD+AMLFE
Sbjct: 1   MEKYFGNAYRGDPGVPHADPERFVTIWIGAAAFSVLTYINPYMWQLSNQYNWHDKAMLFE 60

Query: 245 QHHWKKALKKGQPYQFKWNQYMDKDLRESYYFNWPVYFP 361
           Q+HWKKA+KK +PY+F+WN+  DKD R+SYYFNWP YFP
Sbjct: 61  QYHWKKAMKKNEPYEFQWNKRWDKDHRDSYYFNWPAYFP 99


>ref|XP_002322889.1| predicted protein [Populus trichocarpa] gi|118485830|gb|ABK94762.1|
           unknown [Populus trichocarpa]
           gi|222867519|gb|EEF04650.1| predicted protein [Populus
           trichocarpa]
          Length = 98

 Score =  180 bits (456), Expect = 8e-43
 Identities = 71/99 (71%), Positives = 90/99 (90%)
 Frame = +2

Query: 65  MERFFGNAYRGDPGVPHTDPERFVNIWIGSVAFSATSWFHPYMWQLSNQYNWHDRAMLFE 244
           ME++FGNAYRGDPGVPH DP+RFVNIWIGS AFS  +W +PY+W L+NQ+NWHD+A LFE
Sbjct: 1   MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSILTWSNPYLWTLTNQFNWHDKAFLFE 60

Query: 245 QHHWKKALKKGQPYQFKWNQYMDKDLRESYYFNWPVYFP 361
           Q+HWKKA+KK +PY+FKWN+ MD+++R+SYYFNWP+YFP
Sbjct: 61  QYHWKKAMKKKEPYKFKWNK-MDREVRDSYYFNWPIYFP 98


>ref|NP_001237061.1| uncharacterized protein LOC100527253 [Glycine max]
           gi|255631886|gb|ACU16310.1| unknown [Glycine max]
          Length = 99

 Score =  177 bits (450), Expect = 4e-42
 Identities = 69/99 (69%), Positives = 89/99 (89%)
 Frame = +2

Query: 65  MERFFGNAYRGDPGVPHTDPERFVNIWIGSVAFSATSWFHPYMWQLSNQYNWHDRAMLFE 244
           ME++FGNAYRGDPGVPH+DP+RFVNIW+GS AF+  ++F+PYMWQLSNQ+NW+D+AML+E
Sbjct: 1   MEKYFGNAYRGDPGVPHSDPDRFVNIWVGSAAFAVLTYFNPYMWQLSNQFNWYDKAMLYE 60

Query: 245 QHHWKKALKKGQPYQFKWNQYMDKDLRESYYFNWPVYFP 361
           Q+HWK+A KK QPY+F WN+  DK+ RE YY+NWP+YFP
Sbjct: 61  QYHWKQARKKNQPYEFMWNKTWDKNHREHYYYNWPIYFP 99


>ref|XP_002519498.1| conserved hypothetical protein [Ricinus communis]
           gi|223541361|gb|EEF42912.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score =  174 bits (441), Expect = 4e-41
 Identities = 68/99 (68%), Positives = 88/99 (88%)
 Frame = +2

Query: 65  MERFFGNAYRGDPGVPHTDPERFVNIWIGSVAFSATSWFHPYMWQLSNQYNWHDRAMLFE 244
           ME++FGNAYRGDPGVPH +P+RF NIWIGS AFS  ++ +PYMW LSNQ+NWHD+A LFE
Sbjct: 1   MEKYFGNAYRGDPGVPHAEPDRFFNIWIGSAAFSVMTFINPYMWHLSNQFNWHDKAFLFE 60

Query: 245 QHHWKKALKKGQPYQFKWNQYMDKDLRESYYFNWPVYFP 361
           Q+HWKKA+KK +PY+FKWN+ MD+++R++YY NWP+YFP
Sbjct: 61  QYHWKKAMKKNEPYKFKWNE-MDREVRDNYYINWPIYFP 98


Top