BLASTX nr result
ID: Coptis23_contig00001923
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00001923 (515 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264... 103 2e-20 gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] 96 3e-18 ref|XP_002530460.1| transcription cofactor, putative [Ricinus co... 93 3e-17 ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago ... 91 1e-16 >ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera] Length = 1671 Score = 103 bits (256), Expect = 2e-20 Identities = 55/95 (57%), Positives = 64/95 (67%) Frame = -2 Query: 514 TPLQSANSLFIVPSPSTPLAPSPIPGDSEKQASSISSPSNTGHVGHHQATATLAPAHSLA 335 TPLQSANS F+VPSPSTPLAPSP+PG+SEK S IS +N G++GHHQ T LAP SLA Sbjct: 1285 TPLQSANSPFVVPSPSTPLAPSPMPGESEKLNSGISLITNAGNIGHHQTTGALAPPPSLA 1344 Query: 334 IGKPGINVFCERCERTDLEDKVDTTHGSAQCSMKG 230 IG PGI+ E T L D HG+A + G Sbjct: 1345 IGTPGISASPLLAEFTSL----DGNHGNASTMVSG 1375 >gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] Length = 1405 Score = 95.9 bits (237), Expect = 3e-18 Identities = 52/89 (58%), Positives = 60/89 (67%) Frame = -2 Query: 514 TPLQSANSLFIVPSPSTPLAPSPIPGDSEKQASSISSPSNTGHVGHHQATATLAPAHSLA 335 TPLQS NS F+VPSPSTP+APSP+PGDSEK S ISS SN G++GH Q T+ A A SLA Sbjct: 1020 TPLQSVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNAGNIGHQQTTSAQAAAPSLA 1079 Query: 334 IGKPGINVFCERCERTDLEDKVDTTHGSA 248 IG PGI+ E T D HG+A Sbjct: 1080 IGTPGISASPLLAEFTG----PDGAHGNA 1104 >ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis] gi|223530005|gb|EEF31930.1| transcription cofactor, putative [Ricinus communis] Length = 1382 Score = 92.8 bits (229), Expect = 3e-17 Identities = 46/67 (68%), Positives = 52/67 (77%) Frame = -2 Query: 514 TPLQSANSLFIVPSPSTPLAPSPIPGDSEKQASSISSPSNTGHVGHHQATATLAPAHSLA 335 TPLQSANS F+V SPSTPLAPSP+PGDSEK + ISS SN G++G QAT AP SLA Sbjct: 997 TPLQSANSPFVVQSPSTPLAPSPMPGDSEKPITGISSLSNAGNIGQQQATVAQAPVPSLA 1056 Query: 334 IGKPGIN 314 IG PGI+ Sbjct: 1057 IGTPGIS 1063 >ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|222835956|gb|EEE74377.1| predicted protein [Populus trichocarpa] Length = 1204 Score = 91.7 bits (226), Expect = 6e-17 Identities = 53/95 (55%), Positives = 62/95 (65%) Frame = -2 Query: 514 TPLQSANSLFIVPSPSTPLAPSPIPGDSEKQASSISSPSNTGHVGHHQATATLAPAHSLA 335 TPLQSANS F+VPSPSTPLAPSP+PGDS+K S ISS NTG++ HQ + APA SLA Sbjct: 820 TPLQSANSPFVVPSPSTPLAPSPMPGDSDKPVSGISSLLNTGNI-VHQPSVAQAPAPSLA 878 Query: 334 IGKPGINVFCERCERTDLEDKVDTTHGSAQCSMKG 230 IG PGI+ E T D HG A ++ G Sbjct: 879 IGTPGISASPLLAEFT----SPDGAHGGALTTVSG 909 >ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago truncatula] gi|355487003|gb|AES68206.1| hypothetical protein MTR_2g104400 [Medicago truncatula] Length = 1289 Score = 90.9 bits (224), Expect = 1e-16 Identities = 50/95 (52%), Positives = 59/95 (62%) Frame = -2 Query: 514 TPLQSANSLFIVPSPSTPLAPSPIPGDSEKQASSISSPSNTGHVGHHQATATLAPAHSLA 335 TP+QSANS FI+P+PS PLAPSP+PGD EK S +SS SN +VGH Q + APA SLA Sbjct: 906 TPMQSANSPFIIPTPSPPLAPSPMPGDFEKPISGVSSISNVANVGHQQTGSGAAPAQSLA 965 Query: 334 IGKPGINVFCERCERTDLEDKVDTTHGSAQCSMKG 230 IG PGI+ E T D HG+A G Sbjct: 966 IGTPGISASPLLAEFTG----PDGAHGNALAPSSG 996