BLASTX nr result

ID: Coptis23_contig00001914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001914
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145954.1| PREDICTED: uncharacterized protein LOC101208...   324   2e-86
ref|XP_004160398.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   322   1e-85
ref|XP_002267996.1| PREDICTED: uncharacterized protein LOC100267...   322   1e-85
ref|XP_002519617.1| protein translocase, putative [Ricinus commu...   313   3e-83
ref|XP_003526780.1| PREDICTED: uncharacterized protein LOC100813...   313   4e-83

>ref|XP_004145954.1| PREDICTED: uncharacterized protein LOC101208652 [Cucumis sativus]
          Length = 253

 Score =  324 bits (831), Expect = 2e-86
 Identities = 170/244 (69%), Positives = 188/244 (77%), Gaps = 1/244 (0%)
 Frame = -2

Query: 928 LPP-ANPIVQLQTKFKVLESGFRAWLAKQSLPXXXXXXXXXXXXXXXAIGGFMGTLTSDV 752
           LPP  NP+ Q+Q +FK LE+GFR WLAKQSLP               AIGGFMGTLT+DV
Sbjct: 12  LPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAIGGFMGTLTNDV 71

Query: 751 TSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCVMKRIRGKED 572
           +S+ PTP  +A LNP            +GGP+VQARNFAVMTGVNAGIS VMKR+RGKED
Sbjct: 72  SSSLPTP--QAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKED 129

Query: 571 VQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKFSQPPAEDMY 392
           VQSSMVAAFGSGAMFSLVSGMGGPNQA N +TSGLFFALVQGGLFKLGEKFSQPP ED+Y
Sbjct: 130 VQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKFSQPPVEDVY 189

Query: 391 YSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLILDHIQRNPE 212
           Y++TR ML+NLGLQ+YEKNFKKG              LRDVK+PPGPRLLILDHIQRNPE
Sbjct: 190 YAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLILDHIQRNPE 249

Query: 211 LRER 200
           LRER
Sbjct: 250 LRER 253


>ref|XP_004160398.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101208652
           [Cucumis sativus]
          Length = 253

 Score =  322 bits (824), Expect = 1e-85
 Identities = 169/244 (69%), Positives = 187/244 (76%), Gaps = 1/244 (0%)
 Frame = -2

Query: 928 LPP-ANPIVQLQTKFKVLESGFRAWLAKQSLPXXXXXXXXXXXXXXXAIGGFMGTLTSDV 752
           LPP  NP+ Q+Q +FK LE+GFR WLAKQSLP               AIGGFMGTLT+DV
Sbjct: 12  LPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAIGGFMGTLTNDV 71

Query: 751 TSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCVMKRIRGKED 572
           +S+ PTP  +A LNP            +GGP+VQARNFAVMTGVNAGIS VMKR+RGKED
Sbjct: 72  SSSLPTP--QAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKED 129

Query: 571 VQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKFSQPPAEDMY 392
           VQSSMVAAFGSGAMFSLVSGMGGPNQA N +TSGL FALVQGGLFKLGEKFSQPP ED+Y
Sbjct: 130 VQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLXFALVQGGLFKLGEKFSQPPVEDVY 189

Query: 391 YSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLILDHIQRNPE 212
           Y++TR ML+NLGLQ+YEKNFKKG              LRDVK+PPGPRLLILDHIQRNPE
Sbjct: 190 YAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLILDHIQRNPE 249

Query: 211 LRER 200
           LRER
Sbjct: 250 LRER 253


>ref|XP_002267996.1| PREDICTED: uncharacterized protein LOC100267522 [Vitis vinifera]
          Length = 254

 Score =  322 bits (824), Expect = 1e-85
 Identities = 164/247 (66%), Positives = 190/247 (76%)
 Frame = -2

Query: 937 GLLLPPANPIVQLQTKFKVLESGFRAWLAKQSLPXXXXXXXXXXXXXXXAIGGFMGTLTS 758
           G+++   NPI QLQ +FK LE+GFRAWLAKQSLP               AIG FMGTLT+
Sbjct: 7   GVMVAAQNPIAQLQARFKDLENGFRAWLAKQSLPVEAAVVTATSAAQGAAIGAFMGTLTN 66

Query: 757 DVTSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCVMKRIRGK 578
           D TSA PTP P+A L+P            +GGP+VQARNFAVMTGVNAGISCVMKRIRGK
Sbjct: 67  DATSAIPTP-PQANLSPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISCVMKRIRGK 125

Query: 577 EDVQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKFSQPPAED 398
           EDVQSSMVAAFGSGAMFSLVSGMGGPNQA NV+TSGLFFAL+QGG+F++G+KFSQPPAED
Sbjct: 126 EDVQSSMVAAFGSGAMFSLVSGMGGPNQATNVITSGLFFALIQGGIFQIGQKFSQPPAED 185

Query: 397 MYYSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLILDHIQRN 218
           ++YSRTR ML++LGLQNYEKNFK+G              L+D ++PPGPRLLILDHIQR+
Sbjct: 186 LFYSRTRSMLTSLGLQNYEKNFKRGLLTDSTLPLLTDSALKDARIPPGPRLLILDHIQRD 245

Query: 217 PELRERR 197
           PEL+  R
Sbjct: 246 PELKNAR 252


>ref|XP_002519617.1| protein translocase, putative [Ricinus communis]
           gi|223541207|gb|EEF42762.1| protein translocase,
           putative [Ricinus communis]
          Length = 261

 Score =  313 bits (803), Expect = 3e-83
 Identities = 163/251 (64%), Positives = 188/251 (74%)
 Frame = -2

Query: 937 GLLLPPANPIVQLQTKFKVLESGFRAWLAKQSLPXXXXXXXXXXXXXXXAIGGFMGTLTS 758
           G+++   NPI QLQ K K LE+GF++WL+KQSL                AIG  MGTL  
Sbjct: 11  GVVMGKENPIQQLQAKMKELENGFKSWLSKQSLAVEAAVVTATSATQGAAIGAIMGTLAP 70

Query: 757 DVTSAFPTPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCVMKRIRGK 578
           D++S+ PTP P+AALNP            SGGP+VQARNFAVMTGVNAGIS VMKR+RGK
Sbjct: 71  DISSSLPTPPPDAALNPQAMASIKQAQALSGGPLVQARNFAVMTGVNAGISSVMKRLRGK 130

Query: 577 EDVQSSMVAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKFSQPPAED 398
           EDVQSSMVAAFGSGAMFSLVSG+GGPN AAN +TSGLFFALVQGGLF+LG+KFSQPPAED
Sbjct: 131 EDVQSSMVAAFGSGAMFSLVSGVGGPNPAANAITSGLFFALVQGGLFQLGQKFSQPPAED 190

Query: 397 MYYSRTRGMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLILDHIQRN 218
            +Y+RTR ML +LGLQNYEKNFKKG              LRDV++PPGPRLLILDHIQR+
Sbjct: 191 TFYARTRTMLHSLGLQNYEKNFKKGLLTDSTLPLLTDSALRDVRIPPGPRLLILDHIQRD 250

Query: 217 PELRERR*VCG 185
           PEL+ERR + G
Sbjct: 251 PELKERRGIHG 261


>ref|XP_003526780.1| PREDICTED: uncharacterized protein LOC100813121 [Glycine max]
          Length = 260

 Score =  313 bits (802), Expect = 4e-83
 Identities = 157/240 (65%), Positives = 184/240 (76%)
 Frame = -2

Query: 916 NPIVQLQTKFKVLESGFRAWLAKQSLPXXXXXXXXXXXXXXXAIGGFMGTLTSDVTSAFP 737
           NPI Q+Q +FK LE+GFR WL+KQSLP               AIG FMGTLT+D +S FP
Sbjct: 17  NPIEQIQARFKDLETGFRLWLSKQSLPVEAAVVTTTSAAQGAAIGAFMGTLTADASSTFP 76

Query: 736 TPSPEAALNPXXXXXXXXXXXXSGGPMVQARNFAVMTGVNAGISCVMKRIRGKEDVQSSM 557
           TP P A+LNP            +GGP++QARNFAVMTGVNAGISCV+KRIRGKEDVQSSM
Sbjct: 77  TPPPNASLNPQAMASLKQAQALAGGPLIQARNFAVMTGVNAGISCVLKRIRGKEDVQSSM 136

Query: 556 VAAFGSGAMFSLVSGMGGPNQAANVLTSGLFFALVQGGLFKLGEKFSQPPAEDMYYSRTR 377
            AAFGSGA+FSLVSGMGGPNQA N LTSGLFFALVQGGLF++G+KFSQPPAED +Y++TR
Sbjct: 137 AAAFGSGALFSLVSGMGGPNQATNALTSGLFFALVQGGLFQIGQKFSQPPAEDTHYAKTR 196

Query: 376 GMLSNLGLQNYEKNFKKGXXXXXXXXXXXXXXLRDVKVPPGPRLLILDHIQRNPELRERR 197
            ML+NLGLQ+YEKNFKKG              LRDV++PPGPRLLILDHIQR+ +L+++R
Sbjct: 197 HMLNNLGLQSYEKNFKKGLLTDNTLPLLTDSALRDVRIPPGPRLLILDHIQRDADLKDKR 256


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