BLASTX nr result

ID: Coptis23_contig00001912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001912
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533718.1| conserved hypothetical protein [Ricinus comm...   211   3e-52
ref|XP_002308246.1| predicted protein [Populus trichocarpa] gi|2...   204   3e-50
ref|XP_002323058.1| predicted protein [Populus trichocarpa] gi|2...   202   1e-49
ref|XP_003552303.1| PREDICTED: uncharacterized protein LOC100802...   198   2e-48
gb|AFK40466.1| unknown [Medicago truncatula]                          197   2e-48

>ref|XP_002533718.1| conserved hypothetical protein [Ricinus communis]
           gi|223526373|gb|EEF28663.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  211 bits (536), Expect = 3e-52
 Identities = 100/175 (57%), Positives = 127/175 (72%), Gaps = 4/175 (2%)
 Frame = -3

Query: 776 VCALCEDYVSLAVNYLSANETQTEIIHTLHLGCSQTHSFKQECFKMVDYYAPLFFLEVGK 597
           VC LCE++ S A++YL+ N+TQTEI+  LH  CS+  +FKQ+C  +VDYYAPLFFLEV  
Sbjct: 22  VCVLCEEFASQALDYLTENKTQTEILGALHQACSRVPTFKQQCMTLVDYYAPLFFLEVSS 81

Query: 596 VEPGELCSKLSLCDIPVFAT----QDSCTLCHQAVAEVLAKLDDPDTQLEIIEILLKVCN 429
           V+P E C K++LC   VF +    +D C +CH+AVAEVL KL +PDTQLEIIE+LLK C+
Sbjct: 82  VQPEEFCQKVNLCQEIVFISSKFQEDRCGICHRAVAEVLIKLKNPDTQLEIIEVLLKGCD 141

Query: 428 KTEQYAKKCKRLVFEYGPLIMANAEKFLVKNDLCTTIHACKTSTDGSGVALSSLK 264
             E YA KCKRLVFEYGP+I+ NAE+FL   D+CT +HAC T    SG A +  K
Sbjct: 142 SMENYAAKCKRLVFEYGPIILTNAEQFLESRDICTMLHACDTPQVSSGEAATIAK 196


>ref|XP_002308246.1| predicted protein [Populus trichocarpa] gi|222854222|gb|EEE91769.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  204 bits (518), Expect = 3e-50
 Identities = 98/194 (50%), Positives = 135/194 (69%), Gaps = 4/194 (2%)
 Frame = -3

Query: 827 EDLLDAQGAATKTKPDGVCALCEDYVSLAVNYLSANETQTEIIHTLHLGCSQTHSFKQEC 648
           E   D Q +   T+ D VC LCE++ + A++Y++ N+TQTEI+  LH  CS+  +FKQEC
Sbjct: 48  EQETDIQTSNNVTRKDEVCTLCEEFAAQALDYMAENKTQTEILEILHKTCSRLTTFKQEC 107

Query: 647 FKMVDYYAPLFFLEVGKVEPGELCSKLSLC-DIPVFAT---QDSCTLCHQAVAEVLAKLD 480
             +VDYY+ +FF  V  V+  + C K +LC ++ +F+    +DSC++C  A++EVL KL 
Sbjct: 108 ITLVDYYSSIFFSYVSSVQSDDFCRKYNLCHEMEIFSAKHQEDSCSICQHAISEVLVKLK 167

Query: 479 DPDTQLEIIEILLKVCNKTEQYAKKCKRLVFEYGPLIMANAEKFLVKNDLCTTIHACKTS 300
           DPDTQLEII++LLK CN  E YAKKCKR+VFEYGPLI+ NAE+FL   D+CT +HACK  
Sbjct: 168 DPDTQLEIIDLLLKACNSMENYAKKCKRMVFEYGPLILINAEQFLETKDVCTLLHACKVP 227

Query: 299 TDGSGVALSSLKTA 258
            D SG   S++ TA
Sbjct: 228 KD-SGEQASTMLTA 240


>ref|XP_002323058.1| predicted protein [Populus trichocarpa] gi|222867688|gb|EEF04819.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  202 bits (514), Expect = 1e-49
 Identities = 96/180 (53%), Positives = 129/180 (71%), Gaps = 4/180 (2%)
 Frame = -3

Query: 791 TKPDGVCALCEDYVSLAVNYLSANETQTEIIHTLHLGCSQTHSFKQECFKMVDYYAPLFF 612
           T+ D VC LCE++ S A++YL+ N+TQTEI+  LH  CS+  +F+QEC  +VDYY+ +FF
Sbjct: 60  TRKDEVCTLCEEFASQALDYLAENKTQTEILEKLHRSCSRLTTFEQECITLVDYYSSIFF 119

Query: 611 LEVGKVEPGELCSKLSLC-DIPVFATQ---DSCTLCHQAVAEVLAKLDDPDTQLEIIEIL 444
                V+  + C K +LC ++  F+ +   DSC++C +AV+EVL KL DPDTQLEIIE+L
Sbjct: 120 SYASSVQSEDFCRKFNLCQEMKTFSAKRNDDSCSICQRAVSEVLVKLKDPDTQLEIIELL 179

Query: 443 LKVCNKTEQYAKKCKRLVFEYGPLIMANAEKFLVKNDLCTTIHACKTSTDGSGVALSSLK 264
           LK CN  E+YA KCKR+VFEYGP+I+ANAE+FL   DLCT +HACK S D    A + LK
Sbjct: 180 LKACNSMEKYAHKCKRMVFEYGPVILANAEQFLETTDLCTVLHACKESEDSMEQASAVLK 239


>ref|XP_003552303.1| PREDICTED: uncharacterized protein LOC100802366 isoform 1 [Glycine
           max] gi|356568206|ref|XP_003552304.1| PREDICTED:
           uncharacterized protein LOC100802366 isoform 2 [Glycine
           max]
          Length = 212

 Score =  198 bits (503), Expect = 2e-48
 Identities = 96/181 (53%), Positives = 125/181 (69%), Gaps = 4/181 (2%)
 Frame = -3

Query: 830 AEDLLDAQGAATKTKPDGVCALCEDYVSLAVNYLSANETQTEIIHTLHLGCSQTHSFKQE 651
           A +L +++ +    KPD VCALCE+Y++ A++YL  N+T+TEII  LH  C Q  SFKQ+
Sbjct: 21  ARELANSETSELSIKPD-VCALCEEYITKALDYLHENKTETEIISILHNTCHQLPSFKQK 79

Query: 650 CFKMVDYYAPLFFLEVGKVEPGELCSKLSLCD----IPVFATQDSCTLCHQAVAEVLAKL 483
           C  +VDYY PLFF EV  ++PGE C K++LC     I +   +DSC  C   V+ +L KL
Sbjct: 80  CVALVDYYVPLFFSEVATIQPGEFCHKVNLCQDIAHISLKVQEDSCEFCKDTVSTLLEKL 139

Query: 482 DDPDTQLEIIEILLKVCNKTEQYAKKCKRLVFEYGPLIMANAEKFLVKNDLCTTIHACKT 303
            + DT+LEIIE LLKVCN  E+YA KCKR+VFEYGPLI  +AEK L   D+C  IHACK+
Sbjct: 140 KESDTKLEIIETLLKVCNSVEKYANKCKRMVFEYGPLIFDHAEKILETTDICNIIHACKS 199

Query: 302 S 300
           S
Sbjct: 200 S 200


>gb|AFK40466.1| unknown [Medicago truncatula]
          Length = 242

 Score =  197 bits (502), Expect = 2e-48
 Identities = 88/167 (52%), Positives = 124/167 (74%), Gaps = 4/167 (2%)
 Frame = -3

Query: 785 PDGVCALCEDYVSLAVNYLSANETQTEIIHTLHLGCSQTHSFKQECFKMVDYYAPLFFLE 606
           PD VCALCE+Y + A++Y++ N+TQ+EII  LH  C Q H+F+++C  +VDYY PLFF E
Sbjct: 44  PD-VCALCEEYTTKALDYINENKTQSEIIDILHNTCHQLHTFEKKCINLVDYYLPLFFSE 102

Query: 605 VGKVEPGELCSKLSLC----DIPVFATQDSCTLCHQAVAEVLAKLDDPDTQLEIIEILLK 438
           +  V+PG+ C+K++LC    +I +   +D+C  C + V+ +L K+ DPDT+LEIIEILLK
Sbjct: 103 MTSVQPGDFCNKVNLCQNIANISLKVQEDTCEFCEETVSSLLDKIKDPDTELEIIEILLK 162

Query: 437 VCNKTEQYAKKCKRLVFEYGPLIMANAEKFLVKNDLCTTIHACKTST 297
           VCN  +++  KCK++V EYGPL+  NAEKFL K D+CT +HACK ST
Sbjct: 163 VCNSVDKFGSKCKKIVLEYGPLVFENAEKFLEKTDICTALHACKEST 209


Top