BLASTX nr result

ID: Coptis23_contig00001899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001899
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   293   5e-77
ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71
ref|XP_002525052.1| conserved hypothetical protein [Ricinus comm...   255   1e-65
ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like ...   252   1e-64
ref|XP_004143689.1| PREDICTED: elongator complex protein 6-like ...   249   7e-64

>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
           gi|297736457|emb|CBI25328.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  293 bits (750), Expect = 5e-77
 Identities = 144/232 (62%), Positives = 181/232 (78%), Gaps = 8/232 (3%)
 Frame = -3

Query: 955 IEDCVETSGAFILDHFIKRALS---STHGVVLLIALAHPFSHYQRILRKQGCNLLTQSEN 785
           IEDCVET+GAF+L H +KR+L+   S+   V+ +A + PFSHY RILRK GCNL+T  +N
Sbjct: 26  IEDCVETNGAFVLHHVLKRSLALHTSSTSAVIFLAFSQPFSHYDRILRKLGCNLVTPKDN 85

Query: 784 SRFFFFDMLKLDCPEG-----AGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLME 620
            RF FF++L L+CP+G     +GGL  LY++I+K +  I+ H+ NR  ITIMIDDISLME
Sbjct: 86  KRFVFFNLLTLECPDGDEGKTSGGLPSLYREIQKVI--IALHEENRKSITIMIDDISLME 143

Query: 619 VATCGSFNYVLDFLHYCHTLTSDVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVE 440
           VA  GS N+VLDFLHYCHTLT + GC LV +NH DIYSS   P+L+L+MEYLA+++IK E
Sbjct: 144 VAANGSTNHVLDFLHYCHTLTLEFGCLLVTVNHGDIYSSMERPALLLQMEYLADILIKAE 203

Query: 439 PLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKESSVDYFYPGSR 284
           PL+TGLATDVHGQLTVLNKGI +  G  RNR HNFHFK+KE+SV+ FYPG+R
Sbjct: 204 PLSTGLATDVHGQLTVLNKGICEGQGNSRNRTHNFHFKVKENSVECFYPGTR 255


>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  275 bits (702), Expect = 2e-71
 Identities = 134/232 (57%), Positives = 174/232 (75%), Gaps = 8/232 (3%)
 Frame = -3

Query: 955 IEDCVETSGAFILDHFIKRALSST--HGVVLLIALAHPFSHYQRILRKQGCNLLTQSENS 782
           IEDCVETSG F+L   +KR LSS   +  V+ +A +HP SHY RILRK GCNL+ Q EN 
Sbjct: 31  IEDCVETSGCFVLHQLLKRTLSSQSPNNTVIFLAFSHPLSHYDRILRKLGCNLVAQRENG 90

Query: 781 RFFFFDMLKLDCPE------GAGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLME 620
           RFFFFDMLKL CP+      G GG   LY KI+  +  +   ++N++  TIMIDD+SLME
Sbjct: 91  RFFFFDMLKLLCPDEKEGKTGKGGFTALYWKIQNTICALP--ENNKNHATIMIDDMSLME 148

Query: 619 VATCGSFNYVLDFLHYCHTLTSDVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVE 440
           VA  GS ++VL+F+HYCHTLTS++GCSL+ LNH+DIY+S   P+ ML+ +YL +++IK E
Sbjct: 149 VAAHGSSDHVLNFMHYCHTLTSELGCSLITLNHEDIYTSMERPTFMLQTKYLVDVLIKAE 208

Query: 439 PLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKESSVDYFYPGSR 284
           PLATGLA DVHGQLTVLN+   +  G+ +N+I NFHFK+KE+SV+YFYPG+R
Sbjct: 209 PLATGLAADVHGQLTVLNRDFCNVKGSSKNKISNFHFKVKENSVEYFYPGTR 260


>ref|XP_002525052.1| conserved hypothetical protein [Ricinus communis]
           gi|223535633|gb|EEF37299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score =  255 bits (652), Expect = 1e-65
 Identities = 134/253 (52%), Positives = 169/253 (66%), Gaps = 26/253 (10%)
 Frame = -3

Query: 955 IEDCVETSGAFILDHFIKRALS-STHGVVLLIALAHPFSHYQRILRKQGCNLLTQSENSR 779
           IED VETSG+F+L+H IKR LS ++  V++ +A ++PFSHY RILRK GCNL    +  R
Sbjct: 32  IEDRVETSGSFLLNHLIKRILSPNSFKVIIFLAFSNPFSHYDRILRKLGCNLAAHKDCGR 91

Query: 778 FFFFDMLKLDCP-------------------------EGAGGLVELYQKIRKAVEVISSH 674
           FFFFDML L C                              G + L+ +I+K +  +  +
Sbjct: 92  FFFFDMLMLQCSGEKWLNLFDHKSFEFNSLLDRNEGNSNKAGFITLFGEIQKVICALPEN 151

Query: 673 KHNRSDITIMIDDISLMEVATCGSFNYVLDFLHYCHTLTSDVGCSLVVLNHDDIYSSTIA 494
             N   +TIMIDD+SLMEVA  GS + VLDFLHYCHTLTSD GCSLV LNH+DIYS+   
Sbjct: 152 YKNH--VTIMIDDVSLMEVAAYGSSDRVLDFLHYCHTLTSDFGCSLVTLNHEDIYSTMER 209

Query: 493 PSLMLEMEYLANLVIKVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKES 314
            + +L+MEYLA+++IK EPLATGLATDVHGQLTVL+ GI    G L+N+I NF F +KE+
Sbjct: 210 RAFILQMEYLADILIKAEPLATGLATDVHGQLTVLSTGICCRKGNLKNKISNFQFMVKEN 269

Query: 313 SVDYFYPGSRNLG 275
           SV+YFYPGSR  G
Sbjct: 270 SVEYFYPGSRTCG 282


>ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  252 bits (644), Expect = 1e-64
 Identities = 131/232 (56%), Positives = 165/232 (71%), Gaps = 8/232 (3%)
 Frame = -3

Query: 955 IEDCVETSGAFILDHFIKRALSSTHG--VVLLIALAHPFSHYQRILRKQGCNLLTQSENS 782
           +EDCVETSGAF+L H +KRA SS H   VV+ +A +  F HY RILRK GCNL  Q ++ 
Sbjct: 31  VEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLAFSQSFIHYDRILRKLGCNLAAQRDSG 90

Query: 781 RFFFFDMLKLDCPE------GAGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDISLME 620
           RF FFDML L C +      G G LV LY KI++AV  +   + N+  ITI+IDDISL+E
Sbjct: 91  RFVFFDMLTLGCSDRSGKETGEGVLVGLYCKIQRAVHALI--QENKKHITIVIDDISLLE 148

Query: 619 VATCGSFNYVLDFLHYCHTLTSDVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVIKVE 440
           VA  GS N+VLDFLHYCHTL S+VGCS++ L+H+D+Y     P L L++EYLA+++IKV 
Sbjct: 149 VAANGSSNHVLDFLHYCHTLLSEVGCSIIALDHEDVYMDIERP-LSLQLEYLADVLIKVG 207

Query: 439 PLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKESSVDYFYPGSR 284
           PLATG+A DVHGQLTVLNK +      LRNR+ NF F IKE+  ++FY GSR
Sbjct: 208 PLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKENGTEFFYSGSR 259


>ref|XP_004143689.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  249 bits (637), Expect = 7e-64
 Identities = 130/235 (55%), Positives = 164/235 (69%), Gaps = 11/235 (4%)
 Frame = -3

Query: 955 IEDCVETSGAFILDHFIKRALSSTHG--VVLLIALAHPFSHYQRILRKQGCNLLTQSENS 782
           +EDCVETSGAF+L H +KRA SS H   VV+ +A +  F HY RILRK GCNL  Q ++ 
Sbjct: 28  VEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLAFSQSFIHYDRILRKLGCNLAAQRDSG 87

Query: 781 RFFFFDMLKLDCP---------EGAGGLVELYQKIRKAVEVISSHKHNRSDITIMIDDIS 629
           RF FFDML L C           G G LV LY KI++AV  +   + N+  +TI+IDDIS
Sbjct: 88  RFVFFDMLTLGCSGEKTRSGKETGEGVLVGLYCKIQRAVHALI--QENKKHVTIVIDDIS 145

Query: 628 LMEVATCGSFNYVLDFLHYCHTLTSDVGCSLVVLNHDDIYSSTIAPSLMLEMEYLANLVI 449
           L+EVA  GS N+VLDFLHYCHTL S+VGCS++ L+H+D+Y     P L L++EYLA+++I
Sbjct: 146 LLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALDHEDVYMDIERP-LSLQLEYLADVLI 204

Query: 448 KVEPLATGLATDVHGQLTVLNKGIIDEHGTLRNRIHNFHFKIKESSVDYFYPGSR 284
           KV PLATG+A DVHGQLTVLNK +      LRNR+ NF F IKE+  ++FY GSR
Sbjct: 205 KVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKENGTEFFYSGSR 259


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