BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001894
         (2173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...   493   e-155
emb|CBI21551.3| unnamed protein product [Vitis vinifera]              493   e-155
emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]   477   e-150
ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glyc...   448   e-142
ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|2...   449   e-142

>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score =  493 bits (1268), Expect(2) = e-155
 Identities = 250/342 (73%), Positives = 282/342 (82%)
 Frame = -1

Query: 1273 VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQST 1094
            VRDVRLIMDRNSRRSKGVGY+EFYDAMSVPMAIALSGH LHGQPVMVKPSEAEKNLVQS 
Sbjct: 196  VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSN 255

Query: 1093 AVGGGAGILQGPYGAVARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKG 914
            A G  +G + GPYGAV RKLYVGNLHFNMTE QLRQ+FEPFG VELVQLPLD+ETG CKG
Sbjct: 256  ASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKG 315

Query: 913  FGFVQFAQLEHAKAAQGLNGKLEIAGRVIKVSAVTDHLGVQNVXXXXXXXXXXXXXGLSL 734
            FGFVQFA+LEHAKAAQ LNGKL+IAGR+IKVS+VTDH+GVQ+              GLSL
Sbjct: 316  FGFVQFAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSL 375

Query: 733  NAQSRAMLMQKLDRSGIATSIVGSLGVPMLNGAASNQQPVPLPMNXXXXXXXXXXXXLFL 554
            NAQSRA+LMQKLDR+GIA+SI GSLGVPMLNG+A NQQ + L +N              +
Sbjct: 376  NAQSRALLMQKLDRTGIASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVV 435

Query: 553  ASPAVEPVGNPSICLLLKNMFDPKEEMDDDFDLDIEAEVREECSKYGSVKHIFVDKNSDG 374
             SPA EPVG P+ CLLLKNMFDP  E+D DFDLDI+ EV+EECS +G VKHI+V+K+S G
Sbjct: 436  TSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAG 495

Query: 373  YVYLRFETVAAASGAQRAMHMRWFAQKMISAVFMQPHEYEAK 248
            YVYLRFETV AA  AQRAMHMRWFA+++ISA+F+QP +YEAK
Sbjct: 496  YVYLRFETVEAAVTAQRAMHMRWFARRLISAIFLQPRDYEAK 537



 Score = 85.5 bits (210), Expect(2) = e-155
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -2

Query: 1464 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGK 1333
            FKDKKE  EPEADPERDQRTVFAYQMPLKATE DVY+FFSKAGK
Sbjct: 152  FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 195


>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  493 bits (1268), Expect(2) = e-155
 Identities = 250/342 (73%), Positives = 282/342 (82%)
 Frame = -1

Query: 1273 VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQST 1094
            VRDVRLIMDRNSRRSKGVGY+EFYDAMSVPMAIALSGH LHGQPVMVKPSEAEKNLVQS 
Sbjct: 158  VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSN 217

Query: 1093 AVGGGAGILQGPYGAVARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKG 914
            A G  +G + GPYGAV RKLYVGNLHFNMTE QLRQ+FEPFG VELVQLPLD+ETG CKG
Sbjct: 218  ASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKG 277

Query: 913  FGFVQFAQLEHAKAAQGLNGKLEIAGRVIKVSAVTDHLGVQNVXXXXXXXXXXXXXGLSL 734
            FGFVQFA+LEHAKAAQ LNGKL+IAGR+IKVS+VTDH+GVQ+              GLSL
Sbjct: 278  FGFVQFAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSL 337

Query: 733  NAQSRAMLMQKLDRSGIATSIVGSLGVPMLNGAASNQQPVPLPMNXXXXXXXXXXXXLFL 554
            NAQSRA+LMQKLDR+GIA+SI GSLGVPMLNG+A NQQ + L +N              +
Sbjct: 338  NAQSRALLMQKLDRTGIASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVV 397

Query: 553  ASPAVEPVGNPSICLLLKNMFDPKEEMDDDFDLDIEAEVREECSKYGSVKHIFVDKNSDG 374
             SPA EPVG P+ CLLLKNMFDP  E+D DFDLDI+ EV+EECS +G VKHI+V+K+S G
Sbjct: 398  TSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAG 457

Query: 373  YVYLRFETVAAASGAQRAMHMRWFAQKMISAVFMQPHEYEAK 248
            YVYLRFETV AA  AQRAMHMRWFA+++ISA+F+QP +YEAK
Sbjct: 458  YVYLRFETVEAAVTAQRAMHMRWFARRLISAIFLQPRDYEAK 499



 Score = 85.5 bits (210), Expect(2) = e-155
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -2

Query: 1464 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGK 1333
            FKDKKE  EPEADPERDQRTVFAYQMPLKATE DVY+FFSKAGK
Sbjct: 114  FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 157


>emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
          Length = 461

 Score =  477 bits (1227), Expect(2) = e-150
 Identities = 245/342 (71%), Positives = 276/342 (80%)
 Frame = -1

Query: 1273 VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQST 1094
            VRDVRLIMDRNSRRSKGVGY+EFYDAMSVPMAIALSGH LHGQPVMVKPSEAEKNLVQS 
Sbjct: 122  VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSN 181

Query: 1093 AVGGGAGILQGPYGAVARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKG 914
            A G  +G + GPYGAV RKLYVGNLHFNMTE QLRQ+FEPFG VELVQLPLD+ETG CKG
Sbjct: 182  ASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKG 241

Query: 913  FGFVQFAQLEHAKAAQGLNGKLEIAGRVIKVSAVTDHLGVQNVXXXXXXXXXXXXXGLSL 734
            FGFVQFA+LEHAKAAQ LNGKL+IAGR+IKVS+VTDH+GVQ+              GLSL
Sbjct: 242  FGFVQFAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSL 301

Query: 733  NAQSRAMLMQKLDRSGIATSIVGSLGVPMLNGAASNQQPVPLPMNXXXXXXXXXXXXLFL 554
            NAQSRA+LMQKLDR+       GSLGVPMLNG+A NQQ + L +N              +
Sbjct: 302  NAQSRALLMQKLDRT-------GSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVV 354

Query: 553  ASPAVEPVGNPSICLLLKNMFDPKEEMDDDFDLDIEAEVREECSKYGSVKHIFVDKNSDG 374
             SPA EPVG P+ CLLLKNMFDP  E+D DFDLDI+ EV+EECS +G VKHI+V+K+S G
Sbjct: 355  TSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAG 414

Query: 373  YVYLRFETVAAASGAQRAMHMRWFAQKMISAVFMQPHEYEAK 248
            YVYLRFETV AA  AQRAMHMRWFA+++ISA+F+QP +YEAK
Sbjct: 415  YVYLRFETVEAAVTAQRAMHMRWFARRLISAIFLQPRDYEAK 456



 Score = 85.5 bits (210), Expect(2) = e-150
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -2

Query: 1464 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGK 1333
            FKDKKE  EPEADPERDQRTVFAYQMPLKATE DVY+FFSKAGK
Sbjct: 78   FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 121


>ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 550

 Score =  448 bits (1153), Expect(2) = e-142
 Identities = 236/342 (69%), Positives = 265/342 (77%)
 Frame = -1

Query: 1273 VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQST 1094
            VRDVRLIMDRNSRRSKGVGY+EFYDAMSVPMAIALSG  L GQPVMVKPSEAEKNLVQS 
Sbjct: 217  VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN 276

Query: 1093 AVGGGAGILQGPYGAVARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKG 914
            A GG AG+  GPYGAV RKLYVGNLHFNMTE QLR++FEPFGPVE+VQLPLD+ETG CKG
Sbjct: 277  ASGGAAGVT-GPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKG 335

Query: 913  FGFVQFAQLEHAKAAQGLNGKLEIAGRVIKVSAVTDHLGVQNVXXXXXXXXXXXXXGLSL 734
            FGFVQF  LEHAKAAQ LNGKLEIAGR IKVS VTDH+  Q+               L+L
Sbjct: 336  FGFVQFTHLEHAKAAQSLNGKLEIAGRTIKVSCVTDHVASQDTTAKSADLDDDEGG-LTL 394

Query: 733  NAQSRAMLMQKLDRSGIATSIVGSLGVPMLNGAASNQQPVPLPMNXXXXXXXXXXXXLFL 554
            NA SRA+LMQ+L     A +   SLG+P++NG+   QQ + LP+               +
Sbjct: 395  NAHSRALLMQRL-----AGADPASLGLPVVNGSVPAQQTISLPIGAPVLPTQV------M 443

Query: 553  ASPAVEPVGNPSICLLLKNMFDPKEEMDDDFDLDIEAEVREECSKYGSVKHIFVDKNSDG 374
             +PAVEPVGNPS CLLLKNMFDP  E + DFD+DI+ +V EECSKYG VKHIFVDK S G
Sbjct: 444  PNPAVEPVGNPSDCLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDKKSSG 503

Query: 373  YVYLRFETVAAASGAQRAMHMRWFAQKMISAVFMQPHEYEAK 248
            +VYLRF+TV AASGAQRAMHMRWFA+++ISAVFMQP  YEAK
Sbjct: 504  FVYLRFDTVEAASGAQRAMHMRWFARRLISAVFMQPELYEAK 545



 Score = 85.9 bits (211), Expect(2) = e-142
 Identities = 40/44 (90%), Positives = 42/44 (95%)
 Frame = -2

Query: 1464 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGK 1333
            F+DKKE AEPEADPERDQRTVFAYQMPLKATE DVY+FFSKAGK
Sbjct: 173  FRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 216


>ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|222853217|gb|EEE90764.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  449 bits (1156), Expect(2) = e-142
 Identities = 236/335 (70%), Positives = 267/335 (79%), Gaps = 1/335 (0%)
 Frame = -1

Query: 1273 VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGHHLHGQPVMVKPSEAEKNLVQST 1094
            VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAI LSG  L GQPVMVKPSEAEKNLVQ +
Sbjct: 47   VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQPS 106

Query: 1093 AVGGGAGILQGPYGAVARKLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPLDVETGLCKG 914
            A GGG G + GP+GAV RKLYVGNLHFNMTE QLRQ+FEPFG VELVQLPLD+ETG CKG
Sbjct: 107  ASGGGTGGVTGPFGAVDRKLYVGNLHFNMTEMQLRQLFEPFGIVELVQLPLDLETGQCKG 166

Query: 913  FGFVQFAQLEHAKAAQ-GLNGKLEIAGRVIKVSAVTDHLGVQNVXXXXXXXXXXXXXGLS 737
            FGFVQF QLE+AKAAQ  LNGKLEIAGR IKVS+VT+H G Q+              GL+
Sbjct: 167  FGFVQFTQLENAKAAQSALNGKLEIAGRTIKVSSVTEHGGQQDSGVKSADFDDDDGGGLA 226

Query: 736  LNAQSRAMLMQKLDRSGIATSIVGSLGVPMLNGAASNQQPVPLPMNXXXXXXXXXXXXLF 557
            LNAQSRA+LMQKLDR+G ATSI GSLGVP+LNG+A NQQ + LP+N            L 
Sbjct: 227  LNAQSRALLMQKLDRTGTATSIAGSLGVPLLNGSAPNQQAISLPVNGQTNIGAAAFPALV 286

Query: 556  LASPAVEPVGNPSICLLLKNMFDPKEEMDDDFDLDIEAEVREECSKYGSVKHIFVDKNSD 377
            L SPA E +G PS CLLLKNMFDP  E + DFDLDI+ +V EECS+YG VKHI+VDKNS 
Sbjct: 287  LPSPAYESIGQPSECLLLKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSA 346

Query: 376  GYVYLRFETVAAASGAQRAMHMRWFAQKMISAVFM 272
            G+VYL+F+++ AA+ AQRAMHMRWFA++ I A+FM
Sbjct: 347  GHVYLQFDSMEAAARAQRAMHMRWFARRSILAIFM 381



 Score = 84.0 bits (206), Expect(2) = e-142
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -2

Query: 1464 FKDKKEVAEPEADPERDQRTVFAYQMPLKATEFDVYDFFSKAGK 1333
            FK+KKEV EPEADPERDQRTVF YQMPLKATE DVY+FFSKAGK
Sbjct: 3    FKEKKEVVEPEADPERDQRTVFVYQMPLKATERDVYEFFSKAGK 46