BLASTX nr result
ID: Coptis23_contig00001892
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001892
(1716 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38228.3| unnamed protein product [Vitis vinifera] 430 e-118
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g... 430 e-118
emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera] 430 e-118
ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g... 376 e-101
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g... 374 e-101
>emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 430 bits (1106), Expect = e-118
Identities = 232/420 (55%), Positives = 294/420 (70%), Gaps = 2/420 (0%)
Frame = -2
Query: 1520 QGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGDYTSRNRPLPTEVDRISALDAQR-QQEI 1344
Q + P+ +L + V P I S+ Y S +RPL +RIS LD + QQE+
Sbjct: 182 QQSLPDPRVDLFQQRGSVLPPIPSNTI-----SYASGSRPLSINTERISTLDPKTSQQEV 236
Query: 1343 VFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSAKENPESRYS 1164
+FK+LCSND V+ALQ+E GA+ISVG+ V+E DER++T++A ENPESRYS
Sbjct: 237 IFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYS 296
Query: 1163 PAQNAVVRVFARSVEVGIEKGLDA-SKGASVSARLLVPPNQVGCLMGKGGTIIQEMRKLT 987
PAQN V+ VF RS+E GIEKGLD+ SKG+ VSARL+VP NQVGCLMGKGGTII EMRK +
Sbjct: 297 PAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKAS 356
Query: 986 NTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRDNLFPNKTMNXXXXXX 807
IRIIG D+V K SENDQVVQI G+ NVQ+ ++H+TGRLRDNLFP+KT+N
Sbjct: 357 GAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRS 416
Query: 806 XXXXXXXXXXXXXIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGIDHLGLSHSL 627
+E SPYGR+R+ S L+ S+G+ + R T L +DHLGLSHSL
Sbjct: 417 SSAM----------NEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSL 466
Query: 626 DHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGSKTAIVTNTTVEILVPEQV 447
DH SP+LW SQT+ G N R +++G ++ GSGSK+AI+TNTTVEI++PE V
Sbjct: 467 DHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTVEIVIPENV 516
Query: 446 LGSVYGENGTNLNRLRQISGAKVSIHDPHPGTSETIVVISGTPDQTQAAQSLLQAFILSG 267
+GSVYGENG NL RLR+ISGAKV++H+P PGTS+ IV+ISGTPD+TQAAQSLLQAFI +G
Sbjct: 517 IGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTG 576
>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 430 bits (1106), Expect = e-118
Identities = 232/420 (55%), Positives = 294/420 (70%), Gaps = 2/420 (0%)
Frame = -2
Query: 1520 QGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGDYTSRNRPLPTEVDRISALDAQR-QQEI 1344
Q + P+ +L + V P I S+ Y S +RPL +RIS LD + QQE+
Sbjct: 245 QQSLPDPRVDLFQQRGSVLPPIPSNTI-----SYASGSRPLSINTERISTLDPKTSQQEV 299
Query: 1343 VFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSAKENPESRYS 1164
+FK+LCSND V+ALQ+E GA+ISVG+ V+E DER++T++A ENPESRYS
Sbjct: 300 IFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYS 359
Query: 1163 PAQNAVVRVFARSVEVGIEKGLDA-SKGASVSARLLVPPNQVGCLMGKGGTIIQEMRKLT 987
PAQN V+ VF RS+E GIEKGLD+ SKG+ VSARL+VP NQVGCLMGKGGTII EMRK +
Sbjct: 360 PAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKAS 419
Query: 986 NTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRDNLFPNKTMNXXXXXX 807
IRIIG D+V K SENDQVVQI G+ NVQ+ ++H+TGRLRDNLFP+KT+N
Sbjct: 420 GAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRS 479
Query: 806 XXXXXXXXXXXXXIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGIDHLGLSHSL 627
+E SPYGR+R+ S L+ S+G+ + R T L +DHLGLSHSL
Sbjct: 480 SSAM----------NEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSL 529
Query: 626 DHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGSKTAIVTNTTVEILVPEQV 447
DH SP+LW SQT+ G N R +++G ++ GSGSK+AI+TNTTVEI++PE V
Sbjct: 530 DHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTVEIVIPENV 579
Query: 446 LGSVYGENGTNLNRLRQISGAKVSIHDPHPGTSETIVVISGTPDQTQAAQSLLQAFILSG 267
+GSVYGENG NL RLR+ISGAKV++H+P PGTS+ IV+ISGTPD+TQAAQSLLQAFI +G
Sbjct: 580 IGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTG 639
Score = 89.4 bits (220), Expect = 3e-15
Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 12/177 (6%)
Frame = -2
Query: 1346 IVFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSAKENPESRY 1167
+ F+LLC V+ LQ +TGA I V S S +D RV+ V A + R
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 1166 -----------SPAQNAVVRVFARSVEVG-IEKGLDASKGASVSARLLVPPNQVGCLMGK 1023
S AQ AV+RVF R +EV + G+ G VS RLL +QVG ++GK
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPP--GGVVSCRLLAETSQVGSVIGK 168
Query: 1022 GGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRD 852
GG +++++R+ + + I+++ +K+ + D++V+I GD+ V+ A+ V+ RL+D
Sbjct: 169 GGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQD 225
>emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 430 bits (1106), Expect = e-118
Identities = 232/420 (55%), Positives = 294/420 (70%), Gaps = 2/420 (0%)
Frame = -2
Query: 1520 QGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGDYTSRNRPLPTEVDRISALDAQR-QQEI 1344
Q + P+ +L + V P I S+ Y S +RPL +RIS LD + QQE+
Sbjct: 166 QQSLPDPRVDLFQQRGSVLPPIPSNTI-----SYASGSRPLSINTERISTLDPKTSQQEV 220
Query: 1343 VFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSAKENPESRYS 1164
+FK+LCSND V+ALQ+E GA+ISVG+ V+E DER++T++A ENPESRYS
Sbjct: 221 IFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYS 280
Query: 1163 PAQNAVVRVFARSVEVGIEKGLDA-SKGASVSARLLVPPNQVGCLMGKGGTIIQEMRKLT 987
PAQN V+ VF RS+E GIEKGLD+ SKG+ VSARL+VP NQVGCLMGKGGTII EMRK +
Sbjct: 281 PAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKAS 340
Query: 986 NTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRDNLFPNKTMNXXXXXX 807
IRIIG D+V K SENDQVVQI G+ NVQ+ ++H+TGRLRDNLFP+KT+N
Sbjct: 341 GAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRS 400
Query: 806 XXXXXXXXXXXXXIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGIDHLGLSHSL 627
+E SPYGR+R+ S L+ S+G+ + R T L +DHLGLSHSL
Sbjct: 401 SSAM----------NEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSL 450
Query: 626 DHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGSKTAIVTNTTVEILVPEQV 447
DH SP+LW SQT+ G N R +++G ++ GSGSK+AI+TNTTVEI++PE V
Sbjct: 451 DHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTVEIVIPENV 500
Query: 446 LGSVYGENGTNLNRLRQISGAKVSIHDPHPGTSETIVVISGTPDQTQAAQSLLQAFILSG 267
+GSVYGENG NL RLR+ISGAKV++H+P PGTS+ IV+ISGTPD+TQAAQSLLQAFI +G
Sbjct: 501 IGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTG 560
>ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 710
Score = 376 bits (965), Expect = e-101
Identities = 230/494 (46%), Positives = 289/494 (58%), Gaps = 56/494 (11%)
Frame = -2
Query: 1580 EVYGELPHRSSLVQPTI-------GTVQGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGD 1422
E LP +S P + GT+ E L RSS + SS
Sbjct: 239 EALDALPRATSTAAPRVTLTAAPRGTLTAVQHETVDHLLLRSSALSTLSSSS------NS 292
Query: 1421 YTSRNRPLPTEVDRISALDAQR-QQEIVFKLLCSNDSXXXXXXXXXXXVRALQDETGATI 1245
Y +R LPTEV+R+S+L+ + +QE+ F++LCSND VRALQ ETGATI
Sbjct: 293 YATRIHSLPTEVNRVSSLEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATI 352
Query: 1244 SVGSSVSEADERVVTVSAKENPESRYSPAQNAVVRVFARSVEVGIEKGLDA--SKGASVS 1071
S+G +V+E ++R++T++A ENPESRYSPAQ A V VF+RS+EVG EKGLD+ +KG+ V+
Sbjct: 353 SIGPAVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVT 412
Query: 1070 ARLLVPPNQVGCLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNV 891
RL+VP +QVGCL+GKGG I+ EMRK T IRIIG D+V K S+NDQVVQI G+ +V
Sbjct: 413 VRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSV 472
Query: 890 QNAVFHVTGRLRDNLFPNKTMNXXXXXXXXXXXXXXXXXXXIHESSPYGR------LREQ 729
Q+A+++ GRLRDNLF + T N ++SPYGR L Q
Sbjct: 473 QDALYNAMGRLRDNLFVS-TQNSAGTRSLSSLRV---------DTSPYGRQQDVVPLGSQ 522
Query: 728 TSPALYPSLGLHRNIDRQTMLAHGIDHLGLSHSLDHSRSPQLWTSQ-------------- 591
PA SL H A GIDHLGLS +LDH SP LWT
Sbjct: 523 LPPATSHSLSRHT-------FAQGIDHLGLSRNLDHPSSPGLWTRNLDRPSSPGLWTRNL 575
Query: 590 --------------------------TIGGGNSRGMTDSGRGLTSLRGSLDFGSGSKTAI 489
T+ G NSRG+ D GLTS +G L+ SGSK+AI
Sbjct: 576 DRPSSPGLWTRNLDHRPSSPGLWAPPTVAGINSRGINDFSLGLTSRKGGLELVSGSKSAI 635
Query: 488 VTNTTVEILVPEQVLGSVYGENGTNLNRLRQISGAKVSIHDPHPGTSETIVVISGTPDQT 309
VTNT VEI+VP+ + VYGENG+NL RLRQISGA V +H+P PGTS+ I+VISGTPD+T
Sbjct: 636 VTNTIVEIVVPDDTIDCVYGENGSNLARLRQISGANVVVHEPRPGTSDRIIVISGTPDET 695
Query: 308 QAAQSLLQAFILSG 267
QAAQSLLQAFILSG
Sbjct: 696 QAAQSLLQAFILSG 709
Score = 69.3 bits (168), Expect = 3e-09
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Frame = -2
Query: 1346 IVFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSA-------- 1191
+ F+LLC+ ++ LQ TGA I + + E +R++ V A
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104
Query: 1190 --KENPESRYSPAQNAVVRVFARSVEVGI-EKGLDASKGASVSARLLVPPNQVGCLMGKG 1020
+ S AQ A+++VF R + G ++ +D +S RL+ Q G ++GKG
Sbjct: 105 LLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDRV-MSCRLVADAAQAGSVIGKG 163
Query: 1019 GTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRD 852
G +++ ++K T IR++ D + S +D++++I G + +V+ A+ V+ RL+D
Sbjct: 164 GKVVERIKKETGCKIRVL-TDDLPLCASASDEIIEIEGRVSSVKKALVAVSQRLQD 218
>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 374 bits (959), Expect = e-101
Identities = 210/434 (48%), Positives = 282/434 (64%), Gaps = 2/434 (0%)
Frame = -2
Query: 1562 PHRSSLVQPTIGTVQGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGDYTSRNRPLPTEVD 1383
P V+P + T P+++ + + + V P + SS + + G ++ L + D
Sbjct: 236 PSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFASGIHS-----LSIDAD 290
Query: 1382 RISALDAQ-RQQEIVFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERV 1206
+ +D QQ++VFK+LC+ND VRALQ+E+GAT+SVG SV+ DER+
Sbjct: 291 MLPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERL 350
Query: 1205 VTVSAKENPESRYSPAQNAVVRVFARSVEVGIEKGLDAS-KGASVSARLLVPPNQVGCLM 1029
++++A EN ESRYSPAQ AVV VF+RSV+V IEK ++S KG+ V ARL+VP NQVGC++
Sbjct: 351 ISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVL 410
Query: 1028 GKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRDN 849
GKGG II E+RK+T T IRII D+V +E+D++VQI G+ NVQ+A+++VTGRLRDN
Sbjct: 411 GKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDN 470
Query: 848 LFPNKTMNXXXXXXXXXXXXXXXXXXXIHESSPYGRLREQTSPALYPSLGLHRNIDRQTM 669
LF + N E+SPYGR+R+ +G Q
Sbjct: 471 LFSSVLSNSGTRNGGGTSVYP--------ETSPYGRVRDTAPLVRSTPVGTSHGSFMQHS 522
Query: 668 LAHGIDHLGLSHSLDHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGSKTAI 489
A D LGLSHSLD SP LW Q++ G +SR ++D+GRGL S R + GSG+KTAI
Sbjct: 523 TAQSSDDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTAI 582
Query: 488 VTNTTVEILVPEQVLGSVYGENGTNLNRLRQISGAKVSIHDPHPGTSETIVVISGTPDQT 309
VTNTTVEI+VP+ V+ VYGENGTNL RLRQISGAKV +H+P P TS+ ++VISGTPD+T
Sbjct: 583 VTNTTVEIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITSDRLIVISGTPDET 642
Query: 308 QAAQSLLQAFILSG 267
QAAQSLL AFIL+G
Sbjct: 643 QAAQSLLHAFILTG 656
Score = 77.8 bits (190), Expect = 8e-12
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Frame = -2
Query: 1346 IVFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTV---------- 1197
+ F++LC ++ LQ TG I V + SE+ +RVVTV
Sbjct: 53 VAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRV 112
Query: 1196 -----SAKENPESRYSPAQNAVVRVFARSVEVGIE-KGLDASKGASVS-ARLLVPPNQVG 1038
S E S AQ +++VF R +EV E +G++ V RLL QVG
Sbjct: 113 FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVG 172
Query: 1037 CLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRL 858
++GKGG +++++RK + IR++ DK+ +D++++I GD+ ++ A+ V+ RL
Sbjct: 173 SVIGKGGKVVEKIRKESGCRIRVL-TDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRL 231
Query: 857 RD 852
+D
Sbjct: 232 QD 233