BLASTX nr result

ID: Coptis23_contig00001890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001890
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573151.1| PREDICTED: LOW QUALITY PROTEIN: ferrochelata...    76   3e-12
ref|XP_002516467.1| ferrochelatase, putative [Ricinus communis] ...    75   4e-12
ref|XP_002277290.1| PREDICTED: ferrochelatase-2, chloroplastic [...    75   6e-12
emb|CAN67281.1| hypothetical protein VITISV_021593 [Vitis vinifera]    75   6e-12
ref|XP_002309511.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>ref|XP_003573151.1| PREDICTED: LOW QUALITY PROTEIN: ferrochelatase-1,
           chloroplastic-like [Brachypodium distachyon]
          Length = 461

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
 Frame = -1

Query: 257 LESGIENWGRVPALGCTSSFISDLADAVIEAIPLATVISPEN----SAKKSMSRYTLKLC 90
           LESGIENWGRVPALGCTSSFISDLADAVIEA+P A+ I+        +   + RY  K+ 
Sbjct: 378 LESGIENWGRVPALGCTSSFISDLADAVIEALPSASAITTRKGINADSDMDLRRYLSKMF 437

Query: 89  XXXXXXXXXXXXXXLISTFKN 27
                         +ISTF+N
Sbjct: 438 FGSILAFILLLSPRMISTFRN 458


>ref|XP_002516467.1| ferrochelatase, putative [Ricinus communis]
           gi|223544287|gb|EEF45808.1| ferrochelatase, putative
           [Ricinus communis]
          Length = 480

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/59 (66%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
 Frame = -1

Query: 257 LESGIENWGRVPALGCTSSFISDLADAVIEAIPLATVISPENSAKKSMS----RYTLKL 93
           LESGIENWGRVPALGCTSSFI+DLADAVIEA+P A  IS   S  +       RY +KL
Sbjct: 397 LESGIENWGRVPALGCTSSFITDLADAVIEALPSAKAISTSKSTSEEADYDPFRYAIKL 455


>ref|XP_002277290.1| PREDICTED: ferrochelatase-2, chloroplastic [Vitis vinifera]
           gi|296081616|emb|CBI20621.3| unnamed protein product
           [Vitis vinifera]
          Length = 465

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = -1

Query: 257 LESGIENWGRVPALGCTSSFISDLADAVIEAIPLATVISPENSAKK---SMSRYTLKLCX 87
           LESGIENWGRVPALGCTSSFI+DLADAVIEA+P A  ++ ++++K+       Y +K+  
Sbjct: 383 LESGIENWGRVPALGCTSSFITDLADAVIEALPAAKAMTTQSTSKEFNMDPVNYAIKMFF 442

Query: 86  XXXXXXXXXXXXXLISTFKN 27
                        +IS FKN
Sbjct: 443 GSILAFVLLLSPKMISKFKN 462


>emb|CAN67281.1| hypothetical protein VITISV_021593 [Vitis vinifera]
          Length = 445

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = -1

Query: 257 LESGIENWGRVPALGCTSSFISDLADAVIEAIPLATVISPENSAKK---SMSRYTLKLCX 87
           LESGIENWGRVPALGCTSSFI+DLADAVIEA+P A  ++ ++++K+       Y +K+  
Sbjct: 363 LESGIENWGRVPALGCTSSFITDLADAVIEALPAAKAMTTQSTSKEFNMDPVNYAIKMFF 422

Query: 86  XXXXXXXXXXXXXLISTFKN 27
                        +IS FKN
Sbjct: 423 GSILAFVLLLSPKMISKFKN 442


>ref|XP_002309511.1| predicted protein [Populus trichocarpa] gi|222855487|gb|EEE93034.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
 Frame = -1

Query: 257 LESGIENWGRVPALGCTSSFISDLADAVIEAIPLATVISPENSAKKSMSR----YTLKLC 90
           LESGIENWGRVPALGCTSSFI+DLADAVIEA+P A   S   S  +   R    Y +K+ 
Sbjct: 329 LESGIENWGRVPALGCTSSFITDLADAVIEALPSAKSFSTTRSTSEESDRDFLSYAIKMI 388

Query: 89  XXXXXXXXXXXXXXLISTFKN 27
                         +I+ F+N
Sbjct: 389 FGSVLAFVLLFSPKVITAFRN 409


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