BLASTX nr result

ID: Coptis23_contig00001869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001869
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR09740.1| DIV1B protein [Heptacodium miconioides]                 73   6e-11
ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244...    72   2e-10
ref|XP_003615578.1| DnaJ homolog subfamily C member [Medicago tr...    69   9e-10
gb|ACR09746.1| DIV1A protein [Heptacodium miconioides]                 69   9e-10
ref|XP_002525595.1| DNA binding protein, putative [Ricinus commu...    68   2e-09

>gb|ACR09740.1| DIV1B protein [Heptacodium miconioides]
          Length = 201

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 37/59 (62%), Positives = 40/59 (67%), Gaps = 14/59 (23%)
 Frame = +3

Query: 651 MKWGMEILTPQSYCS--------------TKWTHEENKLFENALAIYDKETPDRWQKVA 785
           M+WGMEIL+P SY S              TKWT  ENKLFENALA +DKETPDRWQKVA
Sbjct: 1   MRWGMEILSPASYLSNLSNSSWLIEESRSTKWTPAENKLFENALAKFDKETPDRWQKVA 59


>ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244960 [Vitis vinifera]
           gi|147844863|emb|CAN81229.1| hypothetical protein
           VITISV_033664 [Vitis vinifera]
          Length = 307

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 11/56 (19%)
 Frame = +3

Query: 651 MKWGMEILTPQSYCS-----------TKWTHEENKLFENALAIYDKETPDRWQKVA 785
           MKW MEIL+P SY S           ++WT EENK FENALA+YD++TPDRWQKVA
Sbjct: 1   MKWEMEILSPASYLSNSNCLLEESKSSRWTPEENKTFENALAVYDRDTPDRWQKVA 56


>ref|XP_003615578.1| DnaJ homolog subfamily C member [Medicago truncatula]
           gi|355516913|gb|AES98536.1| DnaJ homolog subfamily C
           member [Medicago truncatula]
          Length = 307

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 33/56 (58%), Positives = 38/56 (67%), Gaps = 11/56 (19%)
 Frame = +3

Query: 651 MKWGMEILTPQSYC-----------STKWTHEENKLFENALAIYDKETPDRWQKVA 785
           MKW ME+L P SY            +T WT EENKLFENALA++DK+TPDRW KVA
Sbjct: 1   MKWEMEVLPPASYTQNSNWCMEDNMATNWTPEENKLFENALAVHDKDTPDRWHKVA 56


>gb|ACR09746.1| DIV1A protein [Heptacodium miconioides]
          Length = 304

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 35/57 (61%), Positives = 39/57 (68%), Gaps = 12/57 (21%)
 Frame = +3

Query: 651 MKWGMEILTPQSYCS------------TKWTHEENKLFENALAIYDKETPDRWQKVA 785
           M+WGMEIL+P SY S            T+WT  ENKLFENALA +DKETPDRW KVA
Sbjct: 1   MRWGMEILSPASYHSNSSYLLEESKSTTRWTIVENKLFENALAKFDKETPDRWHKVA 57


>ref|XP_002525595.1| DNA binding protein, putative [Ricinus communis]
           gi|223535031|gb|EEF36713.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 307

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 11/56 (19%)
 Frame = +3

Query: 651 MKWGMEILTPQSYCS-----------TKWTHEENKLFENALAIYDKETPDRWQKVA 785
           MKW + +L+P SY S           TKWT  ENK+FENALA+YDK+TPDRW KVA
Sbjct: 1   MKWDIGVLSPTSYLSSTNWLIEESKNTKWTPAENKMFENALAVYDKDTPDRWHKVA 56


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