BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001853
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|2...   271   5e-71
ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|2...   270   7e-71
ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus com...   265   4e-69
ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis ...   265   4e-69
ref|XP_003602582.1| 50S ribosomal protein L17 [Medicago truncatu...   262   2e-68

>ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|222856472|gb|EEE94019.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  271 bits (692), Expect = 5e-71
 Identities = 129/149 (86%), Positives = 141/149 (94%)
 Frame = -2

Query: 448 EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 269
           + RKLNRPTGHRMSM RT+VSQL+KHERIETT+ KAKE+RRLADNMVQLGKEG+LCAARR
Sbjct: 3   KFRKLNRPTGHRMSMLRTLVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAARR 62

Query: 268 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 89
           AAAFVRGDDVIHKLF+E+AYRYKDR+GGYTR+LRTRIRVGDAAPMAYIEF+DRENELRQS
Sbjct: 63  AAAFVRGDDVIHKLFSEMAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRQS 122

Query: 88  KPPIPLQAQKAPLDPWTRSRLTRQMAPPK 2
           KPP P   Q+APLDPWTRSRLTRQ APPK
Sbjct: 123 KPPTPQPPQRAPLDPWTRSRLTRQFAPPK 151


>ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|222853417|gb|EEE90964.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  270 bits (691), Expect = 7e-71
 Identities = 129/149 (86%), Positives = 141/149 (94%)
 Frame = -2

Query: 448 EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 269
           + RKLNRPTGHRMSM RTMVSQL+KHERIETT+ KAKE+RRLADNMVQLGKEG+LCA+RR
Sbjct: 3   KFRKLNRPTGHRMSMLRTMVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCASRR 62

Query: 268 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 89
           AAAFVRGDDVIHKLF+ELAYRYKDR+GGYTR+LRTRIRVGDAAPMAYIEF+DRENELRQS
Sbjct: 63  AAAFVRGDDVIHKLFSELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRQS 122

Query: 88  KPPIPLQAQKAPLDPWTRSRLTRQMAPPK 2
           KPP P   Q+AP+DPWTRSRLTRQ APPK
Sbjct: 123 KPPTPQPPQRAPMDPWTRSRLTRQCAPPK 151


>ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus communis]
           gi|223543607|gb|EEF45136.1| ribosomal protein L17,
           putative [Ricinus communis]
          Length = 160

 Score =  265 bits (676), Expect = 4e-69
 Identities = 127/149 (85%), Positives = 139/149 (93%)
 Frame = -2

Query: 448 EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 269
           + RKL+RPTGHRMS+ RTMVSQLVKHERIETTI KAKE+RRLADNMVQLGKEG+LCAARR
Sbjct: 3   KFRKLSRPTGHRMSLLRTMVSQLVKHERIETTIAKAKEIRRLADNMVQLGKEGSLCAARR 62

Query: 268 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 89
           AAAFVRGDDV+HKLFTELAYRYKDR GGYTR+LRTRIRVGDAAPMAYIEF+DRENELR+S
Sbjct: 63  AAAFVRGDDVLHKLFTELAYRYKDREGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRKS 122

Query: 88  KPPIPLQAQKAPLDPWTRSRLTRQMAPPK 2
           KPP P   Q+ PLDPWTRSRL++Q APPK
Sbjct: 123 KPPTPQPPQRDPLDPWTRSRLSKQFAPPK 151


>ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis vinifera]
           gi|296088573|emb|CBI37564.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  265 bits (676), Expect = 4e-69
 Identities = 128/149 (85%), Positives = 137/149 (91%)
 Frame = -2

Query: 448 EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 269
           + RKL RPTGHRMSM RTMVSQLVKHERIETT+ KAKE+RRLADNMVQLGKEG+LCAARR
Sbjct: 3   KFRKLGRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAARR 62

Query: 268 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 89
           AAAFVRGDDVIHKLFTELAYRYKDR+GGYTR+LRTRIRVGDAAPMAYIEF+DRENELRQS
Sbjct: 63  AAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRQS 122

Query: 88  KPPIPLQAQKAPLDPWTRSRLTRQMAPPK 2
           KP  P   Q+ PLDPWTRSRL +Q APPK
Sbjct: 123 KPATPQPPQRVPLDPWTRSRLCKQFAPPK 151


>ref|XP_003602582.1| 50S ribosomal protein L17 [Medicago truncatula]
           gi|355491630|gb|AES72833.1| 50S ribosomal protein L17
           [Medicago truncatula] gi|388522235|gb|AFK49179.1|
           unknown [Medicago truncatula]
          Length = 162

 Score =  262 bits (670), Expect = 2e-68
 Identities = 126/149 (84%), Positives = 138/149 (92%)
 Frame = -2

Query: 448 EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 269
           + RKLNR T HR+SM RTMVSQLV+HERIETTITKAKEVRRLADNMVQLGKEG++CAARR
Sbjct: 3   KFRKLNRDTSHRLSMLRTMVSQLVRHERIETTITKAKEVRRLADNMVQLGKEGSVCAARR 62

Query: 268 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 89
           AA+FVRGDDV+HKLFTELAYRYKDR+GGYTR+LRTRIRVGDAAPMAYIE +DR+NELRQS
Sbjct: 63  AASFVRGDDVLHKLFTELAYRYKDRTGGYTRVLRTRIRVGDAAPMAYIELIDRDNELRQS 122

Query: 88  KPPIPLQAQKAPLDPWTRSRLTRQMAPPK 2
           KPP P   Q+ PLDPWTRSRLTRQ APPK
Sbjct: 123 KPPTPQPPQRTPLDPWTRSRLTRQFAPPK 151