BLASTX nr result

ID: Coptis23_contig00001848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001848
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865...    69   4e-10
gb|AEW09345.1| Pinus taeda anonymous locus UMN_5432_02 genomic s...    68   9e-10
ref|XP_002970541.1| hypothetical protein SELMODRAFT_15619 [Selag...    67   1e-09
ref|XP_002978620.1| hypothetical protein SELMODRAFT_15618 [Selag...    67   1e-09
ref|XP_004143951.1| PREDICTED: uncharacterized protein LOC101208...    67   2e-09

>ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]
          Length = 398

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 6/96 (6%)
 Frame = -1

Query: 272 EEILKSFARKFPRGEDENTVIIYTTSNSG-RTIHYECEQVRSILQLHRVKIDER---MFA 105
           +  +K+F  K P G  EN V+IYTT+  G R    EC +VRSI++ + V + ER   M +
Sbjct: 237 QTFIKTFEEKLPPG-GENCVVIYTTTLRGIRKTFEECNKVRSIIESYCVHVLERDVSMDS 295

Query: 104 HHMYQLREALGKEQ--FPAVFVKGRFIGGAAELMKL 3
               +LR+ +G EQ   P VFVKGRF+GGA E++KL
Sbjct: 296 RFKEELRKLMGTEQVKVPVVFVKGRFVGGAEEVVKL 331


>gb|AEW09345.1| Pinus taeda anonymous locus UMN_5432_02 genomic sequence
          Length = 122

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
 Frame = -1

Query: 263 LKSFARKFPRGEDENTVIIYTTSNSG-RTIHYECEQVRSILQLHRVKIDERMFAHHM--- 96
           L S+  K P G  E TV++YTT+  G R  + +C  VRS+L+   V IDER  + H+   
Sbjct: 3   LDSYEEKCPPG-GEKTVVLYTTTLRGIRKTYEDCNNVRSVLESFGVCIDERDVSMHLDFR 61

Query: 95  YQLREALGKEQFPAVFVKGRFIGGAAELMKL 3
            +L+E +GK   P +F+KGR+IGGA E+++L
Sbjct: 62  NELKELMGKLAVPRLFIKGRYIGGADEVLQL 92


>ref|XP_002970541.1| hypothetical protein SELMODRAFT_15619 [Selaginella moellendorffii]
           gi|300162057|gb|EFJ28671.1| hypothetical protein
           SELMODRAFT_15619 [Selaginella moellendorffii]
          Length = 164

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
 Frame = -1

Query: 266 ILKSFARKFPRGEDENTVIIYTTSNSG-RTIHYECEQVRSILQLHRVKIDER---MFAHH 99
           +L+ F RK P G  EN V++Y TS  G R  H  C  VR+IL+++  +IDER   M A  
Sbjct: 1   LLERFDRKCPPG-GENRVVLYVTSLQGIRKTHELCRAVRTILEVNFARIDERDVAMHAEF 59

Query: 98  MYQLREALGKEQFPAVFVKGRFIGGAAELMKL 3
             +LR+ +G    P +F+KGR IGG  E+M L
Sbjct: 60  RRELRDLVGAAPVPRLFIKGRHIGGGEEVMAL 91


>ref|XP_002978620.1| hypothetical protein SELMODRAFT_15618 [Selaginella moellendorffii]
           gi|300153969|gb|EFJ20606.1| hypothetical protein
           SELMODRAFT_15618 [Selaginella moellendorffii]
          Length = 164

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
 Frame = -1

Query: 266 ILKSFARKFPRGEDENTVIIYTTSNSG-RTIHYECEQVRSILQLHRVKIDER---MFAHH 99
           +L+ F RK P G  EN V++Y TS  G R  H  C  VR+IL+++  +IDER   M A  
Sbjct: 1   LLERFDRKCPPG-GENRVVLYVTSLQGIRKTHELCRAVRTILEVNFARIDERDVAMHAEF 59

Query: 98  MYQLREALGKEQFPAVFVKGRFIGGAAELMKL 3
             +LR+ +G    P +F+KGR IGG  E+M L
Sbjct: 60  RRELRDLVGAAPVPRLFIKGRHIGGGEEVMAL 91


>ref|XP_004143951.1| PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus]
           gi|449517489|ref|XP_004165778.1| PREDICTED:
           uncharacterized LOC101208965 [Cucumis sativus]
          Length = 361

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
 Frame = -1

Query: 263 LKSFARKFPRGEDENTVIIYTTSNSG-RTIHYECEQVRSILQLHRVKIDERMFAHH---M 96
           L  F  K P G  E TV++YTTS  G R    +C +V+S+L+L +V +DER  A H   +
Sbjct: 203 LSEFPEKCPPGGAE-TVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFL 261

Query: 95  YQLREALGKEQ-FPAVFVKGRFIGGAAELMKL 3
            +L+E LG E   P +FVKGR+IGGA E++ L
Sbjct: 262 KELKELLGDEATVPKMFVKGRYIGGADEVVAL 293


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