BLASTX nr result

ID: Coptis23_contig00001830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001830
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267695.2| PREDICTED: folylpolyglutamate synthase-like ...   325   1e-86
ref|XP_002513590.1| tetrahydrofolylpolyglutamate synthase, putat...   298   2e-78
ref|XP_003544122.1| PREDICTED: LOW QUALITY PROTEIN: folylpolyglu...   297   5e-78
ref|XP_003535287.1| PREDICTED: folylpolyglutamate synthase-like ...   296   6e-78
emb|CAN76202.1| hypothetical protein VITISV_018995 [Vitis vinifera]   290   6e-76

>ref|XP_002267695.2| PREDICTED: folylpolyglutamate synthase-like [Vitis vinifera]
            gi|302143688|emb|CBI22549.3| unnamed protein product
            [Vitis vinifera]
          Length = 536

 Score =  325 bits (834), Expect = 1e-86
 Identities = 167/300 (55%), Positives = 221/300 (73%)
 Frame = -1

Query: 1319 VVLGGPFKPYIERILRDRASSMSSPVLLASDRGKRSTIKGVIVNNGKPCQVCDILVQVDE 1140
            +VLGGPF P+IE I  D+ASSM SPV+ AS  G RS +KGV  +NGKP Q CDI+++V+ 
Sbjct: 235  LVLGGPFLPHIEHIFLDKASSMCSPVVSASGPGNRSAVKGVSKSNGKPFQSCDIVIEVER 294

Query: 1139 DLQTFVEICGVKLVMLGNHQLQNALSATCASLCLRNQGWKVSDGSIRSGLERTYLLGRSQ 960
            D + F+E+  VKL MLG HQLQNA +ATC +LCLR++GW++SD SI +GLE  YLLGRSQ
Sbjct: 295  DFKLFIELFDVKLQMLGIHQLQNAATATCVALCLRDKGWRISDESIHAGLEHAYLLGRSQ 354

Query: 959  FLTSEEIQAIGLSGVQVLADGAHTKESAKSLADTIQLTHPDAEVALVVAMANDKDHIAFA 780
            FLTS E + +GL G  ++ DGAHTKESAK+L DTIQ+T P+A +AL+VAMA+DKDH+AFA
Sbjct: 355  FLTSTEAETLGLPGATIMLDGAHTKESAKALVDTIQMTFPEARLALIVAMASDKDHMAFA 414

Query: 779  RQLLSGKKPKAVIVTEVGIAGDHARMTSASLLHNVWIQAALELGIDFTDIGMVVEDECLV 600
            R+ LSG + +AV +TEV IAG  +R TSAS+L + WIQA+ ELGI+    GM    +   
Sbjct: 415  REFLSGGQLEAVFLTEVNIAGAKSRTTSASMLRDCWIQASKELGINTLHDGMEEYQKLFE 474

Query: 599  ERSVCSSKKVKHTTMLAICSSVEESIQVADRILRRGKMVDSRLIVVTGSLHIVSQALGSL 420
             +S CS+ + KH T+LA  +S+  S++V ++ILR      + +IV+TGSLHIVS  L SL
Sbjct: 475  NQSFCSAGESKHKTILAAENSLLVSLRVGNQILRARTRDQTSIIVITGSLHIVSTVLSSL 534


>ref|XP_002513590.1| tetrahydrofolylpolyglutamate synthase, putative [Ricinus communis]
            gi|223547498|gb|EEF48993.1| tetrahydrofolylpolyglutamate
            synthase, putative [Ricinus communis]
          Length = 552

 Score =  298 bits (764), Expect = 2e-78
 Identities = 156/300 (52%), Positives = 213/300 (71%)
 Frame = -1

Query: 1319 VVLGGPFKPYIERILRDRASSMSSPVLLASDRGKRSTIKGVIVNNGKPCQVCDILVQVDE 1140
            ++LGGPF P IERILRD+AS M +PV+ ASD G R+TIKG+ + +G+ CQ+CDI ++V +
Sbjct: 251  LILGGPFLPDIERILRDKASLMLAPVVSASDSGIRTTIKGLSMFDGRHCQLCDIKIRVKK 310

Query: 1139 DLQTFVEICGVKLVMLGNHQLQNALSATCASLCLRNQGWKVSDGSIRSGLERTYLLGRSQ 960
             L  F+E+  +++ MLG+HQLQNA +A CA+LCLR+QGWK+SD SIR GLE T LLGRSQ
Sbjct: 311  ALNLFIELSDLEMRMLGSHQLQNAATAACAALCLRDQGWKISDASIRLGLENTCLLGRSQ 370

Query: 959  FLTSEEIQAIGLSGVQVLADGAHTKESAKSLADTIQLTHPDAEVALVVAMANDKDHIAFA 780
            FL S++ + +G+ G  +L DGAHTKESAK+L DT++LT P+A +AL+VAMA+DKDH+AFA
Sbjct: 371  FLASKDAEVLGVPGATILLDGAHTKESAKALVDTVRLTFPEARLALIVAMASDKDHLAFA 430

Query: 779  RQLLSGKKPKAVIVTEVGIAGDHARMTSASLLHNVWIQAALELGIDFTDIGMVVEDECLV 600
             + L  KK +AV +TE  IAG  +R T+A LL + W+QA  ELGI+    GM    E L 
Sbjct: 431  GEFLLDKKLEAVFLTEAEIAGGKSRTTAAPLLRDYWVQACEELGINTLHDGMAEYRELLE 490

Query: 599  ERSVCSSKKVKHTTMLAICSSVEESIQVADRILRRGKMVDSRLIVVTGSLHIVSQALGSL 420
               + S + +    +LA  +S+E S+++A   LR      S ++VVTGSLHIVS  L  L
Sbjct: 491  NEFIHSERHLGGKIILATNNSLEISLRMASEFLRGRTGNQSSVLVVTGSLHIVSSVLARL 550


>ref|XP_003544122.1| PREDICTED: LOW QUALITY PROTEIN: folylpolyglutamate synthase-like
            [Glycine max]
          Length = 536

 Score =  297 bits (760), Expect = 5e-78
 Identities = 161/302 (53%), Positives = 214/302 (70%), Gaps = 2/302 (0%)
 Frame = -1

Query: 1319 VVLGGPFKPYIERILRDRASSMSSPVLLASDRGKRSTIKGVIVNNGKPCQVCDILVQVDE 1140
            +VLGGPF P+IERI+RD+A +M+SPV+ A D G + T+K   + NG+PCQ+CDIL+QV +
Sbjct: 235  LVLGGPFVPHIERIIRDKAVAMNSPVVSAYDTGNKCTMKSFSILNGRPCQICDILIQVVK 294

Query: 1139 DLQTFVEICGVKLVMLGNHQLQNALSATCASLCLRNQGWKVSDGSIRSGLERTYLLGRSQ 960
            D++   ++  VKL MLG+HQLQNA +ATC +L LRN GW +SD SIR GLE TYLLGRSQ
Sbjct: 295  DMKMSCKLHDVKLQMLGDHQLQNAATATCVALVLRNLGWSISDKSIRYGLEDTYLLGRSQ 354

Query: 959  FLTSEEIQAIGLSGVQVLADGAHTKESAKSLADTIQLTHPDAEVALVVAMANDKDHIAFA 780
            FLTSEE + +GL+G  VL DGAHTKESAK+L +TI++  P A++  VVAMA+DKDH+ FA
Sbjct: 355  FLTSEEAEVLGLTGSTVLLDGAHTKESAKALMNTIRMAFPKAQLVFVVAMASDKDHVGFA 414

Query: 779  RQLLSGKKPKAVIVTEVGIAGDHARMTSASLLHNVWIQAALELGIDFTDIGMVVEDECLV 600
            R++LSG   + V++TE  IAG   R T ASLL + WI+A+ ELGI     GM    E L 
Sbjct: 415  REILSGVHVETVVLTEAAIAGGVTRTTPASLLRDSWIKASGELGIGIVHDGMAEYSELLK 474

Query: 599  ERSVCSSKKV-KHTTMLAICSSVEESIQVADRIL-RRGKMVDSRLIVVTGSLHIVSQALG 426
            E+ V S   +    T+LA  S ++  ++ A++IL RRG   + R+IV TGSLHI +  L 
Sbjct: 475  EQPVGSESNLGDGKTVLATESCLKGCLRTANQILSRRGD--EKRVIVFTGSLHIAASVLA 532

Query: 425  SL 420
            SL
Sbjct: 533  SL 534


>ref|XP_003535287.1| PREDICTED: folylpolyglutamate synthase-like [Glycine max]
          Length = 536

 Score =  296 bits (759), Expect = 6e-78
 Identities = 160/302 (52%), Positives = 212/302 (70%), Gaps = 2/302 (0%)
 Frame = -1

Query: 1319 VVLGGPFKPYIERILRDRASSMSSPVLLASDRGKRSTIKGVIVNNGKPCQVCDILVQVDE 1140
            +VLGGPF P+IERI+RD+A +M SPV+ A D G + T+K   + NG+PCQ+CDIL+QV +
Sbjct: 235  LVLGGPFVPHIERIIRDKAVAMDSPVVSAYDTGNKCTVKSFSIRNGRPCQICDILIQVVK 294

Query: 1139 DLQTFVEICGVKLVMLGNHQLQNALSATCASLCLRNQGWKVSDGSIRSGLERTYLLGRSQ 960
            D++   ++  VKL MLG+HQLQNA +ATC +L LRN GW +SD SIR GLE TYLLGRSQ
Sbjct: 295  DMKMSCKLHDVKLQMLGDHQLQNAATATCVALVLRNLGWSISDESIRYGLEDTYLLGRSQ 354

Query: 959  FLTSEEIQAIGLSGVQVLADGAHTKESAKSLADTIQLTHPDAEVALVVAMANDKDHIAFA 780
            FLTSEE + +GL+G  VL DGAHTKESAK+L +TI++  P A++  VVAMA+DKDH+ FA
Sbjct: 355  FLTSEEAEVLGLTGSTVLLDGAHTKESAKALMNTIRMAFPKAQLVFVVAMASDKDHVGFA 414

Query: 779  RQLLSGKKPKAVIVTEVGIAGDHARMTSASLLHNVWIQAALELGIDFTDIGMVVEDECLV 600
            R++LSG   + V++TE  IAG   R T ASLL + WI+A+ ELGI     GM    E L 
Sbjct: 415  REILSGVHVETVLLTEAAIAGGVTRTTPASLLRDSWIKASDELGIGIVHDGMAEYSELLK 474

Query: 599  ERSVCSSKKV-KHTTMLAICSSVEESIQVADRIL-RRGKMVDSRLIVVTGSLHIVSQALG 426
            E+ V S   +    T+LA    ++  ++ A++IL RRG   + R+IV TGSLHI +  L 
Sbjct: 475  EQPVGSESNLGDGKTVLATVPCLKGCLRSANQILSRRGD--EKRVIVFTGSLHIAASVLA 532

Query: 425  SL 420
            SL
Sbjct: 533  SL 534


>emb|CAN76202.1| hypothetical protein VITISV_018995 [Vitis vinifera]
          Length = 637

 Score =  290 bits (742), Expect = 6e-76
 Identities = 153/294 (52%), Positives = 206/294 (70%)
 Frame = -1

Query: 1319 VVLGGPFKPYIERILRDRASSMSSPVLLASDRGKRSTIKGVIVNNGKPCQVCDILVQVDE 1140
            +VLGGPF P+IE I  D+ASSM SPV+ AS  G RS +KGV  +NGKP Q CDI+++V+ 
Sbjct: 235  LVLGGPFLPHIEHIFLDKASSMCSPVVSASGPGNRSAVKGVSKSNGKPFQSCDIVIEVER 294

Query: 1139 DLQTFVEICGVKLVMLGNHQLQNALSATCASLCLRNQGWKVSDGSIRSGLERTYLLGRSQ 960
            D + F+E+  VKL MLG HQLQNA +ATC +LCLR++GW++SD SI +GLE  YLLGRSQ
Sbjct: 295  DFKLFIELFDVKLQMLGIHQLQNAATATCVALCLRDKGWRISDESIHAGLEHAYLLGRSQ 354

Query: 959  FLTSEEIQAIGLSGVQVLADGAHTKESAKSLADTIQLTHPDAEVALVVAMANDKDHIAFA 780
            FLTS E + +GL G  ++ DGAHTKESAK+L DTIQ+T P+A +AL+VAMA+        
Sbjct: 355  FLTSTEAETLGLPGATIMLDGAHTKESAKALVDTIQMTFPEARLALIVAMASG------- 407

Query: 779  RQLLSGKKPKAVIVTEVGIAGDHARMTSASLLHNVWIQAALELGIDFTDIGMVVEDECLV 600
                   + +AV +TEV IAG ++R TSAS+L + WIQA+ ELGI+    GM    +   
Sbjct: 408  -------QLEAVFLTEVNIAGANSRTTSASMLRDCWIQASKELGINTLHDGMEEYQKLFE 460

Query: 599  ERSVCSSKKVKHTTMLAICSSVEESIQVADRILRRGKMVDSRLIVVTGSLHIVS 438
             +S CS+ + KH T+LA  +S+  S++V ++ILR      + +IV+TGSLHIVS
Sbjct: 461  NQSFCSAGESKHKTILAAENSLXVSLRVGNQILRARXRDQTXIIVITGSLHIVS 514


Top