BLASTX nr result

ID: Coptis23_contig00001820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001820
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vi...   339   7e-91
ref|XP_004138793.1| PREDICTED: zinc finger protein 511-like [Cuc...   318   2e-84
ref|XP_002300111.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84
ref|XP_002509504.1| zinc finger protein, putative [Ricinus commu...   308   2e-81
ref|XP_002871603.1| hypothetical protein ARALYDRAFT_909371 [Arab...   295   1e-77

>ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vinifera]
           gi|147815339|emb|CAN67772.1| hypothetical protein
           VITISV_010523 [Vitis vinifera]
           gi|296082337|emb|CBI21342.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  339 bits (870), Expect = 7e-91
 Identities = 169/237 (71%), Positives = 196/237 (82%), Gaps = 2/237 (0%)
 Frame = +3

Query: 39  GFPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEGRVIYCPI 218
           GFP+W+ + RRF P+SPFF+SGNIERELLAKQVALDLT+++K  LQ ++ EEGR ++CPI
Sbjct: 11  GFPYWSSVRRRFGPESPFFTSGNIERELLAKQVALDLTEDEKQHLQNLEDEEGRGLFCPI 70

Query: 219 VNCGAKLNSLDGFEDHYHARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGIAM 398
           V CGA+L SL+GFEDHY+ARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARG AM
Sbjct: 71  VGCGARLTSLEGFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAM 130

Query: 399 YECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSKKQRQKYQRKLADHKKEE- 575
           YECLVEGCG+KLKSYKSRQQHLVD HKFPTSFEFFKKG  SKK+RQK QRK A HK+EE 
Sbjct: 131 YECLVEGCGMKLKSYKSRQQHLVDKHKFPTSFEFFKKGQPSKKRRQKLQRKQAVHKREEA 190

Query: 576 SAGMEV-DETISNLVSAVXXXXXXXXXXXXXXFGRRHTRGLTFLPRTLQRDRNHNSS 743
           S+ ME+ +ETIS LVSAV              FGR HTRG TF+PR +Q ++  +S+
Sbjct: 191 SSTMEIEEETISGLVSAVSKLSTSDSTPSSVSFGRHHTRGFTFVPRAVQNEKRPDST 247


>ref|XP_004138793.1| PREDICTED: zinc finger protein 511-like [Cucumis sativus]
           gi|449518803|ref|XP_004166425.1| PREDICTED: zinc finger
           protein 511-like [Cucumis sativus]
          Length = 249

 Score =  318 bits (815), Expect = 2e-84
 Identities = 159/240 (66%), Positives = 182/240 (75%), Gaps = 1/240 (0%)
 Frame = +3

Query: 42  FPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEGRVIYCPIV 221
           FP W P+ RRF PDSPFF+SGN+ERE+LAKQVALDLT+++K QL  M V+    I+CPIV
Sbjct: 9   FPCWKPLQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDARSEIFCPIV 68

Query: 222 NCGAKLNSLDGFEDHYHARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGIAMY 401
            CGA L SLD FEDHY++RHTASCSVC RVYPTSRLLS+HVSEAHDSFFQAKVARG  MY
Sbjct: 69  GCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMY 128

Query: 402 ECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSKKQRQKYQRKLADHKKEESA 581
           ECLVEGCGLK KSYKSR QHLVD HKF  SFEFFKK H SKKQRQK  RK A   +EE++
Sbjct: 129 ECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQASQGREETS 188

Query: 582 GMEVD-ETISNLVSAVXXXXXXXXXXXXXXFGRRHTRGLTFLPRTLQRDRNHNSSLGGEK 758
            MEV+ E +  L+S V              FGRRHTRGLTF+PR +QR++  +SS  G K
Sbjct: 189 KMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVSDSSTAGTK 248


>ref|XP_002300111.1| predicted protein [Populus trichocarpa] gi|222847369|gb|EEE84916.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  317 bits (813), Expect = 3e-84
 Identities = 163/237 (68%), Positives = 188/237 (79%), Gaps = 3/237 (1%)
 Frame = +3

Query: 39  GFPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEG-RVIYCP 215
           GFP+W PI RRF P+SPFFSSGNIERELLAKQVALDL++++K +LQ +  E+G R + CP
Sbjct: 14  GFPYWKPIRRRFGPESPFFSSGNIERELLAKQVALDLSEDEKHRLQDLINEDGSREVVCP 73

Query: 216 IVNCGAKLNSLDGFEDHYHARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGIA 395
           IV CGA L SL+ FEDHY+ RHTASCSVCSRVYPTS LLSIHVSEAHDSFFQAKVARG A
Sbjct: 74  IVGCGAHLISLEHFEDHYNGRHTASCSVCSRVYPTSLLLSIHVSEAHDSFFQAKVARGYA 133

Query: 396 MYECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSKKQRQKYQRKLADHKKEE 575
           MYECLVEGCGLK K+YK RQQHLVD HKFP+SFEFFKK HLSKK RQK  RK A H+ EE
Sbjct: 134 MYECLVEGCGLKFKNYKGRQQHLVDKHKFPSSFEFFKKAHLSKKARQKQHRKQAIHRSEE 193

Query: 576 -SAGMEVD-ETISNLVSAVXXXXXXXXXXXXXXFGRRHTRGLTFLPRTLQRDRNHNS 740
            S+ M+++ ETI  LVSAV              FGRR+TRGLTF+PR +QR++  +S
Sbjct: 194 TSSKMDIEGETIDGLVSAVSKLSTSDSSPSSISFGRRNTRGLTFVPRAVQREKRADS 250


>ref|XP_002509504.1| zinc finger protein, putative [Ricinus communis]
           gi|223549403|gb|EEF50891.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 253

 Score =  308 bits (788), Expect = 2e-81
 Identities = 154/229 (67%), Positives = 178/229 (77%), Gaps = 1/229 (0%)
 Frame = +3

Query: 39  GFPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEGRVIYCPI 218
           GFP+W PI RRF P+SPFF+ GNIERELLAKQ+ALDLT+++K QLQ +  E+ R + CPI
Sbjct: 15  GFPYWTPIRRRFGPESPFFAYGNIERELLAKQIALDLTEDEKPQLQNLIDEDDREVSCPI 74

Query: 219 VNCGAKLNSLDGFEDHYHARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGIAM 398
           V CGA L SL+ FEDHY+ARHTASCSVCSRVYPTSRLL IHVSEAHDSFFQAKV RG  M
Sbjct: 75  VGCGAHLTSLEDFEDHYNARHTASCSVCSRVYPTSRLLGIHVSEAHDSFFQAKVERGYPM 134

Query: 399 YECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSKKQRQKYQRKLADHKKEES 578
           YECLVEGCGLKL +YKSRQQHLVD HKFP++FEFFKK H SKK RQK++ +    K+E  
Sbjct: 135 YECLVEGCGLKLINYKSRQQHLVDKHKFPSAFEFFKKAHPSKKARQKHKHQRVIPKEEAP 194

Query: 579 AGMEVD-ETISNLVSAVXXXXXXXXXXXXXXFGRRHTRGLTFLPRTLQR 722
           + MEV+ ETI  LVSAV              FGRRH RGLTF+PR +Q+
Sbjct: 195 SKMEVEGETIDGLVSAVSRLSTSDSSPSSISFGRRHNRGLTFVPRAVQQ 243


>ref|XP_002871603.1| hypothetical protein ARALYDRAFT_909371 [Arabidopsis lyrata subsp.
           lyrata] gi|297317440|gb|EFH47862.1| hypothetical protein
           ARALYDRAFT_909371 [Arabidopsis lyrata subsp. lyrata]
          Length = 264

 Score =  295 bits (756), Expect = 1e-77
 Identities = 151/244 (61%), Positives = 178/244 (72%), Gaps = 9/244 (3%)
 Frame = +3

Query: 39  GFPFWNPIFRRFLPDSPFFSSGNIERELLAKQVALDLTDEDKCQLQYMDVEEGRVIYCPI 218
           GFP+WNPI RRF PDSPFF+SGN+ERELLAKQVALDLT ++   LQ     E R I CPI
Sbjct: 14  GFPYWNPIRRRFSPDSPFFASGNVERELLAKQVALDLTQDEINHLQKFVETESRRISCPI 73

Query: 219 VNCGAKLNSLDGFEDHYHARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGIAM 398
           V C  +L SLD FEDHY+ARHTASCSVCSRVYPTSRLLSIH+SEAHDSFFQAKVARG  M
Sbjct: 74  VGCPERLKSLDHFEDHYNARHTASCSVCSRVYPTSRLLSIHISEAHDSFFQAKVARGYDM 133

Query: 399 YECLVEGCGLKLKSYKSRQQHLVDGHKFPTSFEFFKKGHLSKKQRQKYQRKLADHKKEE- 575
           YECLVEGCGLK KSYK+R +HL+D HKFP++FEFFKK  LSKK+R+K QR+     K E 
Sbjct: 134 YECLVEGCGLKFKSYKARHRHLIDKHKFPSTFEFFKKTQLSKKRREKLQRQHVSRLKHEE 193

Query: 576 ------SAGMEVDE--TISNLVSAVXXXXXXXXXXXXXXFGRRHTRGLTFLPRTLQRDRN 731
                 S  MEV++  ++  LVSA+              FGRRH R LTF+PR++ +++ 
Sbjct: 194 DKEAASSDAMEVEDKASVDGLVSALSTLTTSDTTPSNVSFGRRHGRVLTFVPRSVHKEKR 253

Query: 732 HNSS 743
             SS
Sbjct: 254 TESS 257


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