BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001819
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457231.1| hypothetical protein SORBIDRAFT_03g003740 [S...    55   8e-18
gb|AFW80212.1| hypothetical protein ZEAMMB73_030566 [Zea mays]         54   2e-17
ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein ...    65   3e-15
gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana]                   65   3e-15
ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. ly...    65   3e-15

>ref|XP_002457231.1| hypothetical protein SORBIDRAFT_03g003740 [Sorghum bicolor]
           gi|241929206|gb|EES02351.1| hypothetical protein
           SORBIDRAFT_03g003740 [Sorghum bicolor]
          Length = 1004

 Score = 55.1 bits (131), Expect(3) = 8e-18
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -1

Query: 765 SFSRRECEQHAMSMS*LDFNTDKEKDVVEQVF 670
           SFSRRECE HAMSMS LDFNT+ EK+ +EQVF
Sbjct: 347 SFSRRECEHHAMSMSKLDFNTEDEKECIEQVF 378



 Score = 42.4 bits (98), Expect(3) = 8e-18
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -3

Query: 586 KELVELLFQEGLIKALFATET 524
           KELVELLFQEGL+KALFATET
Sbjct: 418 KELVELLFQEGLVKALFATET 438



 Score = 38.9 bits (89), Expect(3) = 8e-18
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -2

Query: 674 FSKAILCLIEEDRNLPAIELMLSIL 600
           F  AI CL+EEDR+LPAIELML +L
Sbjct: 378 FRNAIGCLVEEDRSLPAIELMLPLL 402


>gb|AFW80212.1| hypothetical protein ZEAMMB73_030566 [Zea mays]
          Length = 979

 Score = 53.9 bits (128), Expect(3) = 2e-17
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = -1

Query: 765 SFSRRECEQHAMSMS*LDFNTDKEKDVVEQVF 670
           SFSRRECE HAMSMS LDF+T++EK+ +EQVF
Sbjct: 347 SFSRRECEHHAMSMSKLDFSTEEEKECIEQVF 378



 Score = 42.4 bits (98), Expect(3) = 2e-17
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -3

Query: 586 KELVELLFQEGLIKALFATET 524
           KELVELLFQEGL+KALFATET
Sbjct: 418 KELVELLFQEGLVKALFATET 438



 Score = 38.9 bits (89), Expect(3) = 2e-17
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -2

Query: 674 FSKAILCLIEEDRNLPAIELMLSIL 600
           F  AI CL+EEDR+LPAIELML +L
Sbjct: 378 FCNAIGCLVEEDRSLPAIELMLPLL 402


>ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis
           thaliana] gi|20197305|gb|AAC67203.2| expressed protein
           [Arabidopsis thaliana] gi|28973761|gb|AAO64196.1|
           putative DEAD/DEAH box RNA helicase (HUA ENHANCER2)
           [Arabidopsis thaliana] gi|330250934|gb|AEC06028.1| RNA
           helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis
           thaliana]
          Length = 995

 Score = 65.5 bits (158), Expect(2) = 3e-15
 Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 11/71 (15%)
 Frame = -1

Query: 765 SFSRRECEQHAMSMS*LDFNTDKEKDVVEQVF*SNSM--LN*RGQKLTCY---------* 619
           SFSRRECEQHA+SMS LDFNTD+EK+VVEQVF +N+M  LN   + L             
Sbjct: 343 SFSRRECEQHALSMSKLDFNTDEEKEVVEQVF-NNAMQCLNEEDRSLPAIELMLPLLQRG 401

Query: 618 VNVEHSGLLPI 586
           + V HSGLLP+
Sbjct: 402 IAVHHSGLLPV 412



 Score = 42.4 bits (98), Expect(2) = 3e-15
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -3

Query: 586 KELVELLFQEGLIKALFATET 524
           KELVELLFQEGL+KALFATET
Sbjct: 414 KELVELLFQEGLVKALFATET 434


>gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana]
          Length = 991

 Score = 65.5 bits (158), Expect(2) = 3e-15
 Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 11/71 (15%)
 Frame = -1

Query: 765 SFSRRECEQHAMSMS*LDFNTDKEKDVVEQVF*SNSM--LN*RGQKLTCY---------* 619
           SFSRRECEQHA+SMS LDFNTD+EK+VVEQVF +N+M  LN   + L             
Sbjct: 339 SFSRRECEQHALSMSKLDFNTDEEKEVVEQVF-NNAMQCLNEEDRSLPAIELMLPLLQRG 397

Query: 618 VNVEHSGLLPI 586
           + V HSGLLP+
Sbjct: 398 IAVHHSGLLPV 408



 Score = 42.4 bits (98), Expect(2) = 3e-15
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -3

Query: 586 KELVELLFQEGLIKALFATET 524
           KELVELLFQEGL+KALFATET
Sbjct: 410 KELVELLFQEGLVKALFATET 430


>ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297329585|gb|EFH60004.1| HUA enhancer 2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 984

 Score = 65.5 bits (158), Expect(2) = 3e-15
 Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 11/71 (15%)
 Frame = -1

Query: 765 SFSRRECEQHAMSMS*LDFNTDKEKDVVEQVF*SNSM--LN*RGQKLTCY---------* 619
           SFSRRECEQHA+SMS LDFNTD+EK+VVEQVF +N+M  LN   + L             
Sbjct: 338 SFSRRECEQHALSMSKLDFNTDEEKEVVEQVF-NNAMQCLNEEDRSLPAIELMLPLLQRG 396

Query: 618 VNVEHSGLLPI 586
           + V HSGLLP+
Sbjct: 397 IAVHHSGLLPV 407



 Score = 42.4 bits (98), Expect(2) = 3e-15
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -3

Query: 586 KELVELLFQEGLIKALFATET 524
           KELVELLFQEGL+KALFATET
Sbjct: 409 KELVELLFQEGLVKALFATET 429