BLASTX nr result

ID: Coptis23_contig00001818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001818
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282010.2| PREDICTED: sorting nexin-1 [Vitis vinifera] ...   198   4e-49
ref|XP_002322816.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48
ref|XP_003518207.1| PREDICTED: sorting nexin-2-like [Glycine max]     194   5e-48
emb|CAD29576.1| sorting nexin 1 [Brassica oleracea]                   192   2e-47
ref|XP_004143325.1| PREDICTED: sorting nexin 1-like [Cucumis sat...   191   5e-47

>ref|XP_002282010.2| PREDICTED: sorting nexin-1 [Vitis vinifera]
           gi|297740147|emb|CBI30329.3| unnamed protein product
           [Vitis vinifera]
          Length = 401

 Score =  198 bits (503), Expect = 4e-49
 Identities = 99/114 (86%), Positives = 107/114 (93%)
 Frame = +2

Query: 2   IFLQFEALDVFVNRIASHPELQQSHDLRTFLQAEEETMERARFQETGIFKKKPADLMQIF 181
           I ++ +ALD+FVNRIASH ELQQS DLRTFLQA+EETMERAR QETGIFKKKPADLMQIF
Sbjct: 104 IEMRRQALDIFVNRIASHHELQQSEDLRTFLQADEETMERARSQETGIFKKKPADLMQIF 163

Query: 182 KDVQSKVSDVVLGKEKPVEESNPEYEKLKRYILELEDHLAEAQKHAYRLVKRHR 343
           KDVQS+VSDVVLGKEKPVEESNPEYEK+K YI ELE+HLAEAQKHAYRLVKRHR
Sbjct: 164 KDVQSRVSDVVLGKEKPVEESNPEYEKMKHYIFELENHLAEAQKHAYRLVKRHR 217


>ref|XP_002322816.1| predicted protein [Populus trichocarpa] gi|222867446|gb|EEF04577.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  195 bits (496), Expect = 3e-48
 Identities = 98/114 (85%), Positives = 104/114 (91%)
 Frame = +2

Query: 2   IFLQFEALDVFVNRIASHPELQQSHDLRTFLQAEEETMERARFQETGIFKKKPADLMQIF 181
           I ++ + LD+FVNRIASH ELQQS DLRTFLQA+EETMER R QETGIFKKKPAD MQIF
Sbjct: 107 IEMRRQGLDIFVNRIASHQELQQSEDLRTFLQADEETMERLRSQETGIFKKKPADFMQIF 166

Query: 182 KDVQSKVSDVVLGKEKPVEESNPEYEKLKRYILELEDHLAEAQKHAYRLVKRHR 343
           KDVQSKVSDVVLGKEKPVEESNPEYEKLK YI ELE+HLAEAQKHAYRLVKRHR
Sbjct: 167 KDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELENHLAEAQKHAYRLVKRHR 220


>ref|XP_003518207.1| PREDICTED: sorting nexin-2-like [Glycine max]
          Length = 405

 Score =  194 bits (494), Expect = 5e-48
 Identities = 99/114 (86%), Positives = 104/114 (91%)
 Frame = +2

Query: 2   IFLQFEALDVFVNRIASHPELQQSHDLRTFLQAEEETMERARFQETGIFKKKPADLMQIF 181
           I ++ +ALDVFVNRIASH ELQQS DLR FLQAEEETMER R  ETGIFKKKPADLMQIF
Sbjct: 108 IEMRRQALDVFVNRIASHHELQQSEDLRLFLQAEEETMERLRSHETGIFKKKPADLMQIF 167

Query: 182 KDVQSKVSDVVLGKEKPVEESNPEYEKLKRYILELEDHLAEAQKHAYRLVKRHR 343
           KDVQSKVSDVVLGKEKPVEESNPEYEK+K YI ELE+HLAEAQKHAYRLVKRHR
Sbjct: 168 KDVQSKVSDVVLGKEKPVEESNPEYEKMKHYIFELENHLAEAQKHAYRLVKRHR 221


>emb|CAD29576.1| sorting nexin 1 [Brassica oleracea]
          Length = 401

 Score =  192 bits (488), Expect = 2e-47
 Identities = 94/108 (87%), Positives = 100/108 (92%)
 Frame = +2

Query: 20  ALDVFVNRIASHPELQQSHDLRTFLQAEEETMERARFQETGIFKKKPADLMQIFKDVQSK 199
           ALD+FVNRIASHPELQQS DLRTFLQA+EETMER RFQETGIF KKPAD MQ+F+DVQSK
Sbjct: 110 ALDIFVNRIASHPELQQSEDLRTFLQADEETMERFRFQETGIFNKKPADFMQMFRDVQSK 169

Query: 200 VSDVVLGKEKPVEESNPEYEKLKRYILELEDHLAEAQKHAYRLVKRHR 343
           VSD VLGKEKPVEE+ PEYEKLK YI ELE+HLAEAQKHAYRLVKRHR
Sbjct: 170 VSDAVLGKEKPVEETTPEYEKLKHYIFELENHLAEAQKHAYRLVKRHR 217


>ref|XP_004143325.1| PREDICTED: sorting nexin 1-like [Cucumis sativus]
           gi|449508423|ref|XP_004163308.1| PREDICTED: sorting
           nexin 1-like [Cucumis sativus]
          Length = 400

 Score =  191 bits (485), Expect = 5e-47
 Identities = 95/114 (83%), Positives = 104/114 (91%)
 Frame = +2

Query: 2   IFLQFEALDVFVNRIASHPELQQSHDLRTFLQAEEETMERARFQETGIFKKKPADLMQIF 181
           I ++ +ALD+FVNRIASH ELQ+S DLRTFLQAEEETMER R  ++GIFKKKPADLMQIF
Sbjct: 103 IEMRRQALDIFVNRIASHHELQKSEDLRTFLQAEEETMERLRSHDSGIFKKKPADLMQIF 162

Query: 182 KDVQSKVSDVVLGKEKPVEESNPEYEKLKRYILELEDHLAEAQKHAYRLVKRHR 343
           KDVQSKVSD+VLGKEKPVEESNPEYEKLK YI ELE+HL EAQKHAYRLVKRHR
Sbjct: 163 KDVQSKVSDIVLGKEKPVEESNPEYEKLKHYIFELENHLTEAQKHAYRLVKRHR 216


Top