BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001816
         (1273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   284   3e-74
emb|CBI18100.3| unnamed protein product [Vitis vinifera]              284   3e-74
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...   239   8e-61
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...   227   6e-57
ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...   211   4e-52

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  284 bits (727), Expect = 3e-74
 Identities = 167/336 (49%), Positives = 214/336 (63%), Gaps = 15/336 (4%)
 Frame = +3

Query: 255  LKALACTRSLIVNHSTSNETITHILKTLLQILNNTQXXXXXXXXXXXXXEIALHHDVLSN 434
            L+ALA  RSLI+N STS+ TI+ + +TL + L  T              +IA HH  LS 
Sbjct: 24   LRALASARSLIINSSTSDSTISALFETLTRFLQLTTEPRALHHTLKLLSDIAFHHSRLSG 83

Query: 435  VVLDNVYSYILARKDTSRLTTKALGVLVEDAK-----SSSSYELGEDLFRSLCLSPSVSV 599
            +V  +V SY+L R D++RL+ ++L VL   A+     +S+  EL +  F SLC  PSVSV
Sbjct: 84   LVFHSVRSYLL-RSDSTRLSAESLAVLSSIAEHDRSLASAMDELDDRFFVSLCFGPSVSV 142

Query: 600  RSWVLGNARRFCVSPGILVSVMLVCTNDPFPNVRRAALEGLIGLRELEDVRKRGVIERCY 779
            RSW L NA RF + P +L++VML  T DP+P VRR AL+GL+GL +   +   GVIE CY
Sbjct: 143  RSWFLSNAFRFPIRPYVLLTVMLGFTKDPYPYVRRVALDGLVGLSKSSVIEDCGVIEGCY 202

Query: 780  DRAVELLLDNNEYVRSVAVRVVCEWGQILAALDSEVGNAEWFDAVFIQLCAIVRDMSVEV 959
             RAVELL D  + VR  AV  V EWG++L A   E+    W DAVF++LC++VRDMS+EV
Sbjct: 203  CRAVELLGDAEDSVRCAAVHAVSEWGKMLVASVQEMNKRYWSDAVFVRLCSMVRDMSMEV 262

Query: 960  RTTAFAALGEMKLVSEDILLQTLSKKVIGVTK----------KRKISGLVTSKAFDLPPS 1109
            R  AF ALG++ +VSEDILLQTLSK+V+G+TK          KRK  G    K FD+   
Sbjct: 263  RVAAFDALGKIGVVSEDILLQTLSKRVLGITKEKKPLGQCSAKRKSLGQYIPKHFDIQAC 322

Query: 1110 NAAGVFVHGLEDEFHEVRTSASISLGKLTIFSGKFS 1217
             AAG FVHGLEDEF+EVR SA  SL  LTI S KF+
Sbjct: 323  VAAGAFVHGLEDEFYEVRWSACHSLHTLTILSAKFA 358


>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  284 bits (727), Expect = 3e-74
 Identities = 167/336 (49%), Positives = 214/336 (63%), Gaps = 15/336 (4%)
 Frame = +3

Query: 255  LKALACTRSLIVNHSTSNETITHILKTLLQILNNTQXXXXXXXXXXXXXEIALHHDVLSN 434
            L+ALA  RSLI+N STS+ TI+ + +TL + L  T              +IA HH  LS 
Sbjct: 24   LRALASARSLIINSSTSDSTISALFETLTRFLQLTTEPRALHHTLKLLSDIAFHHSRLSG 83

Query: 435  VVLDNVYSYILARKDTSRLTTKALGVLVEDAK-----SSSSYELGEDLFRSLCLSPSVSV 599
            +V  +V SY+L R D++RL+ ++L VL   A+     +S+  EL +  F SLC  PSVSV
Sbjct: 84   LVFHSVRSYLL-RSDSTRLSAESLAVLSSIAEHDRSLASAMDELDDRFFVSLCFGPSVSV 142

Query: 600  RSWVLGNARRFCVSPGILVSVMLVCTNDPFPNVRRAALEGLIGLRELEDVRKRGVIERCY 779
            RSW L NA RF + P +L++VML  T DP+P VRR AL+GL+GL +   +   GVIE CY
Sbjct: 143  RSWFLSNAFRFPIRPYVLLTVMLGFTKDPYPYVRRVALDGLVGLSKSSVIEDCGVIEGCY 202

Query: 780  DRAVELLLDNNEYVRSVAVRVVCEWGQILAALDSEVGNAEWFDAVFIQLCAIVRDMSVEV 959
             RAVELL D  + VR  AV  V EWG++L A   E+    W DAVF++LC++VRDMS+EV
Sbjct: 203  CRAVELLGDAEDSVRCAAVHAVSEWGKMLVASVQEMNKRYWSDAVFVRLCSMVRDMSMEV 262

Query: 960  RTTAFAALGEMKLVSEDILLQTLSKKVIGVTK----------KRKISGLVTSKAFDLPPS 1109
            R  AF ALG++ +VSEDILLQTLSK+V+G+TK          KRK  G    K FD+   
Sbjct: 263  RVAAFDALGKIGVVSEDILLQTLSKRVLGITKEKKPLGQCSAKRKSLGQYIPKHFDIQAC 322

Query: 1110 NAAGVFVHGLEDEFHEVRTSASISLGKLTIFSGKFS 1217
             AAG FVHGLEDEF+EVR SA  SL  LTI S KF+
Sbjct: 323  VAAGAFVHGLEDEFYEVRWSACHSLHTLTILSAKFA 358


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  239 bits (611), Expect = 8e-61
 Identities = 146/333 (43%), Positives = 207/333 (62%), Gaps = 3/333 (0%)
 Frame = +3

Query: 231  NKSSHGHYLKALACTRSLIVNHSTSNETITHILKTLLQILN-NTQXXXXXXXXXXXXXEI 407
            N +++   L+ALA  RSLI+N +TS+ TI  IL+TL   L   T              ++
Sbjct: 14   NDNNNPLSLQALASLRSLIINPNTSDSTIYSILETLTCSLQLRTNSLTTHHHILKLLTDL 73

Query: 408  ALHHDVLSNVVLDNVYSYILARKDTSRLTTKALGVLVEDAKSSSSYELGEDLFRSLCLSP 587
            A H   LS+ +L+ ++   L   ++ ++ T++L  L   A S  + ++ + LF SLC + 
Sbjct: 74   ASHRTHLSSQILNTIHYSSLLFTESIQIATESLTSLASIANSDHN-KIDDQLFMSLCFAA 132

Query: 588  -SVSVRSWVLGNARRFCVSPGILVSVMLVCTNDPFPNVRRAALEGLIGLRELEDVRKR-G 761
             S S R  +L N  R  +   +L ++ L  T DP+P VR+A+L+GL+GL +  +V +   
Sbjct: 133  TSTSARLRLLRNGERLGIGMHVLFTMFLGFTEDPYPYVRKASLDGLLGLCKSGNVFEDIS 192

Query: 762  VIERCYDRAVELLLDNNEYVRSVAVRVVCEWGQILAALDSEVGNAEWFDAVFIQLCAIVR 941
            VIE CY RAVELL DN   VRS A+RVV EWGQ+L A   E    +W + VF+QLC++VR
Sbjct: 193  VIEGCYFRAVELLQDNEHSVRSAAIRVVSEWGQMLIAAKEENDKIDWSNQVFVQLCSMVR 252

Query: 942  DMSVEVRTTAFAALGEMKLVSEDILLQTLSKKVIGVTKKRKISGLVTSKAFDLPPSNAAG 1121
            DMSVEVR  AF ALG++KLVSEDILLQT+SKKV+ + K++   G  T++ F++  S+ AG
Sbjct: 253  DMSVEVRVEAFNALGKIKLVSEDILLQTISKKVLAIMKEKNSHGQCTAERFEILASSYAG 312

Query: 1122 VFVHGLEDEFHEVRTSASISLGKLTIFSGKFSK 1220
             FVHGLEDEFHEVR SA  SL   TI   +F++
Sbjct: 313  AFVHGLEDEFHEVRKSACNSLRIHTILYAEFAR 345


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
            gi|223533988|gb|EEF35710.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 890

 Score =  227 bits (578), Expect = 6e-57
 Identities = 136/348 (39%), Positives = 196/348 (56%)
 Frame = +3

Query: 174  EKSIWKKCENELXXXXXXENKSSHGHYLKALACTRSLIVNHSTSNETITHILKTLLQILN 353
            E  +W+ CE  L                ++L   RSLIVN  TSN TI+ IL+ L + LN
Sbjct: 2    EHHVWRSCEGSLDITNT-----------QSLTSVRSLIVNPHTSNSTISLILEALTRSLN 50

Query: 354  NTQXXXXXXXXXXXXXEIALHHDVLSNVVLDNVYSYILARKDTSRLTTKALGVLVEDAKS 533
             T              ++A     LS+++  +++S  L  +  + L +      + +   
Sbjct: 51   LTTHSLTRQRTLKLLTDVASRRPYLSSLIFQSIHSITLDFESLAALCS------ISELNK 104

Query: 534  SSSYELGEDLFRSLCLSPSVSVRSWVLGNARRFCVSPGILVSVMLVCTNDPFPNVRRAAL 713
            +   EL + LF S+C       R  +L N  R  V   +L++V L  + DP+P VR+ AL
Sbjct: 105  NLKVELVDRLFISMCFDAPACERLRLLRNGERLGVGVHVLLTVFLGFSKDPYPYVRKEAL 164

Query: 714  EGLIGLRELEDVRKRGVIERCYDRAVELLLDNNEYVRSVAVRVVCEWGQILAALDSEVGN 893
             GL+ L +      + VIE CY R VELL D ++ VRS AV +V EWG +L A + E   
Sbjct: 165  NGLVSLCKYGVFEDKSVIEGCYRRGVELLKDADDCVRSAAVNLVSEWGLMLIAANQEEDK 224

Query: 894  AEWFDAVFIQLCAIVRDMSVEVRTTAFAALGEMKLVSEDILLQTLSKKVIGVTKKRKISG 1073
             +WFD VF+QLC++VRDMS+ VR  AF+ALG++++VSEDILLQTLSKKV+ + K++K   
Sbjct: 225  TDWFDTVFLQLCSMVRDMSMGVRVGAFSALGKIQIVSEDILLQTLSKKVLPIIKEKKSQ- 283

Query: 1074 LVTSKAFDLPPSNAAGVFVHGLEDEFHEVRTSASISLGKLTIFSGKFS 1217
               ++ F    ++AAG F+HGLEDEF+EVR SA  SL KL I S +F+
Sbjct: 284  --IAERFQSLAASAAGAFMHGLEDEFYEVRKSACYSLRKLVILSAEFA 329


>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
            gi|355498406|gb|AES79609.1| Integrator complex subunit
            [Medicago truncatula]
          Length = 906

 Score =  211 bits (536), Expect = 4e-52
 Identities = 138/335 (41%), Positives = 190/335 (56%), Gaps = 4/335 (1%)
 Frame = +3

Query: 228  ENKSSHGHYLKALACTRSLIVNHSTSNETITHILKTLLQILNNTQXXXXXXXXXXXXXEI 407
            E  SS    L  L+  RSL++N ST N T++ ILKTL    N +                
Sbjct: 9    EPDSSQPLTLHNLSSIRSLLINPSTPNTTLSQILKTLTNSQNPS---------------- 52

Query: 408  ALHHDVLSNVVLDNVYSYILARKDTSRL-TTKALGVL--VEDAKSSSSYELGEDLFRSLC 578
              HH +            +L+    S L TT  +  L  +    SS  + L ++ F SLC
Sbjct: 53   --HHTLT-----------LLSHPSLSHLQTTTTVDSLASISQLPSSKPFVLDDERFVSLC 99

Query: 579  LSPSVSVRSWVLGNARR-FCVSPGILVSVMLVCTNDPFPNVRRAALEGLIGLRELEDVRK 755
              PS+S R W+L NA   F V P +L +V+L  TNDP+PNVR A+LEGL+ L E  +   
Sbjct: 100  FGPSISGRVWMLRNAGLGFNVRPALLFTVLLGFTNDPYPNVRAASLEGLVRLSECGEFND 159

Query: 756  RGVIERCYDRAVELLLDNNEYVRSVAVRVVCEWGQILAALDSEVGNAEWFDAVFIQLCAI 935
              +I  CY R V+LL D  + VR  AVRVV  WG +L+A ++++  A W + VF +LC++
Sbjct: 160  VSMINGCYQRGVQLLNDMEDDVRLAAVRVVTSWGLMLSAFNADM-KAYWGNDVFAKLCSM 218

Query: 936  VRDMSVEVRTTAFAALGEMKLVSEDILLQTLSKKVIGVTKKRKISGLVTSKAFDLPPSNA 1115
             RDMS++VR  AF  L +M++VS+D LLQ+LSKKV+G  K+++     TS+ F    SN 
Sbjct: 219  ARDMSMKVRVEAFNGLAKMEIVSKDFLLQSLSKKVLGNGKQKETLDQSTSEQFAKLASNV 278

Query: 1116 AGVFVHGLEDEFHEVRTSASISLGKLTIFSGKFSK 1220
            AG  VHGLEDEF EVR SA  SL +LTI S +F++
Sbjct: 279  AGALVHGLEDEFFEVRKSACQSLHRLTILSVEFAR 313