BLASTX nr result

ID: Coptis23_contig00001813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001813
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42779.1| unknown [Lotus japonicus]                              142   5e-32
ref|XP_002284469.1| PREDICTED: phytanoyl-CoA dioxygenase domain-...   139   5e-31
ref|XP_002309477.1| predicted protein [Populus trichocarpa] gi|1...   137   1e-30
ref|XP_003556103.1| PREDICTED: phytanoyl-CoA dioxygenase domain-...   137   2e-30
ref|XP_004140466.1| PREDICTED: phytanoyl-CoA dioxygenase domain-...   136   3e-30

>gb|AFK42779.1| unknown [Lotus japonicus]
          Length = 280

 Score =  142 bits (358), Expect = 5e-32
 Identities = 65/78 (83%), Positives = 71/78 (91%)
 Frame = -2

Query: 623 VHFDFPSPSYDQKDFVSIEVKAGSLVVIHGDLIHQSFENRSPKSRHALSLHVVDTDSCVW 444
           V FD PSPSYDQKDFV IEVK+GSLVVIHGDLIHQSFEN SPKSRHA SLHVVDTD C W
Sbjct: 203 VKFDRPSPSYDQKDFVPIEVKSGSLVVIHGDLIHQSFENLSPKSRHAYSLHVVDTDGCKW 262

Query: 443 APDNWLRRKVDPKPLYIS 390
           AP+NW+RRKV+P+PLY+S
Sbjct: 263 APENWIRRKVEPEPLYVS 280


>ref|XP_002284469.1| PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1
           [Vitis vinifera] gi|297737693|emb|CBI26894.3| unnamed
           protein product [Vitis vinifera]
          Length = 283

 Score =  139 bits (349), Expect = 5e-31
 Identities = 63/78 (80%), Positives = 70/78 (89%)
 Frame = -2

Query: 623 VHFDFPSPSYDQKDFVSIEVKAGSLVVIHGDLIHQSFENRSPKSRHALSLHVVDTDSCVW 444
           V+FD PSPSYD KDFV +EVKAGSLVV+HGDLIHQSFEN+SPKSRHA SLHVVDTD C W
Sbjct: 206 VYFDQPSPSYDDKDFVPVEVKAGSLVVLHGDLIHQSFENQSPKSRHAYSLHVVDTDGCKW 265

Query: 443 APDNWLRRKVDPKPLYIS 390
           A +NW+RRKVDP+PLY S
Sbjct: 266 AQENWIRRKVDPEPLYES 283


>ref|XP_002309477.1| predicted protein [Populus trichocarpa] gi|118486091|gb|ABK94889.1|
           unknown [Populus trichocarpa]
           gi|222855453|gb|EEE93000.1| predicted protein [Populus
           trichocarpa]
          Length = 282

 Score =  137 bits (346), Expect = 1e-30
 Identities = 63/78 (80%), Positives = 70/78 (89%)
 Frame = -2

Query: 623 VHFDFPSPSYDQKDFVSIEVKAGSLVVIHGDLIHQSFENRSPKSRHALSLHVVDTDSCVW 444
           V+FD PSPSYDQKDFV IEVKAGSLV+IHGDLIHQSFEN+S KSRHA S HVVDTD C W
Sbjct: 205 VYFDQPSPSYDQKDFVPIEVKAGSLVLIHGDLIHQSFENQSSKSRHAYSWHVVDTDGCKW 264

Query: 443 APDNWLRRKVDPKPLYIS 390
           AP+NW+RRKV+P+PLY S
Sbjct: 265 APENWIRRKVEPEPLYAS 282


>ref|XP_003556103.1| PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein
           1-like [Glycine max]
          Length = 280

 Score =  137 bits (345), Expect = 2e-30
 Identities = 63/78 (80%), Positives = 70/78 (89%)
 Frame = -2

Query: 623 VHFDFPSPSYDQKDFVSIEVKAGSLVVIHGDLIHQSFENRSPKSRHALSLHVVDTDSCVW 444
           V FD PSPSYDQKDFV IEVKAGSLVVIHGDLIHQSFEN+SPKSRHA SLHVVD   C W
Sbjct: 203 VKFDRPSPSYDQKDFVPIEVKAGSLVVIHGDLIHQSFENQSPKSRHAYSLHVVDMVGCKW 262

Query: 443 APDNWLRRKVDPKPLYIS 390
           AP+NW+RRKV+P+PL++S
Sbjct: 263 APENWIRRKVEPEPLFVS 280


>ref|XP_004140466.1| PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein
           1-like [Cucumis sativus]
          Length = 274

 Score =  136 bits (342), Expect = 3e-30
 Identities = 62/78 (79%), Positives = 71/78 (91%)
 Frame = -2

Query: 623 VHFDFPSPSYDQKDFVSIEVKAGSLVVIHGDLIHQSFENRSPKSRHALSLHVVDTDSCVW 444
           V+FD PSP+Y++KDFV IEVKAGSLVVIHGD+IHQSFEN+SPKSRHA SLHVVDT+ CVW
Sbjct: 197 VYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQSFENQSPKSRHAYSLHVVDTEGCVW 256

Query: 443 APDNWLRRKVDPKPLYIS 390
           A DNW+RRKV P+PLY S
Sbjct: 257 AQDNWIRRKVQPEPLYES 274


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