BLASTX nr result

ID: Coptis23_contig00001795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001795
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301683.1| predicted protein [Populus trichocarpa] gi|2...   655   0.0  
gb|ABK94934.1| unknown [Populus trichocarpa] gi|118486859|gb|ABK...   655   0.0  
gb|ACJ11724.1| glutamine synthase [Gossypium hirsutum]                651   0.0  
ref|XP_004145846.1| PREDICTED: glutamine synthetase cytosolic is...   649   0.0  
ref|XP_003619869.1| Glutamine synthetase [Medicago truncatula] g...   647   0.0  

>ref|XP_002301683.1| predicted protein [Populus trichocarpa] gi|222843409|gb|EEE80956.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  655 bits (1689), Expect = 0.0
 Identities = 312/356 (87%), Positives = 329/356 (92%)
 Frame = +2

Query: 137  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSKLPKWNYDGSST 316
            MSL++DLINLNL+DST+KIIAEYIW+GGSGMD+RSKGRTLPGPV+DPSKLPKWNYDGSST
Sbjct: 1    MSLLSDLINLNLSDSTEKIIAEYIWVGGSGMDIRSKGRTLPGPVSDPSKLPKWNYDGSST 60

Query: 317  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 496
            GQAPG DSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKR  AAKIFSHPDVV
Sbjct: 61   GQAPGEDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRCKAAKIFSHPDVV 120

Query: 497  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 676
            AEVPWYGLEQEYTLLQKDV                 YYC AG DKAFGRDIVDAHYKACL
Sbjct: 121  AEVPWYGLEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGAGVDKAFGRDIVDAHYKACL 180

Query: 677  YAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITELAGVVLSFDPKPIP 856
            YAGINISGINGEVMPGQWEFQVGPSVGIS+GDELW ARYILERITE+AGVVLSFDPKPI 
Sbjct: 181  YAGINISGINGEVMPGQWEFQVGPSVGISSGDELWAARYILERITEVAGVVLSFDPKPIQ 240

Query: 857  GDWNGAGAHTNYSTKTMREDGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1036
            GDWNGAGAHTNYSTK+MR +GG+ VIKKAIEKLGLRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMRNEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1037 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 1204
            I+TF WGVANRGAS+RVGRDTEK+GKGYFEDRRPASNMDPYVVTSMIAETTILWKP
Sbjct: 301  INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356


>gb|ABK94934.1| unknown [Populus trichocarpa] gi|118486859|gb|ABK95264.1| unknown
            [Populus trichocarpa]
          Length = 356

 Score =  655 bits (1689), Expect = 0.0
 Identities = 312/356 (87%), Positives = 329/356 (92%)
 Frame = +2

Query: 137  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSKLPKWNYDGSST 316
            MSL++DLINLNL+DST+KIIAEYIW+GGSGMD+RSKGRTLPGPV+DPSKLPKWNYDGSST
Sbjct: 1    MSLLSDLINLNLSDSTEKIIAEYIWVGGSGMDIRSKGRTLPGPVSDPSKLPKWNYDGSST 60

Query: 317  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 496
            GQAPG DSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKR  AAKIFSHPDVV
Sbjct: 61   GQAPGEDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRCKAAKIFSHPDVV 120

Query: 497  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 676
            AEVPWYGLEQEYTLLQKDV                 YYC AG DKAFGRDIVDAHYKACL
Sbjct: 121  AEVPWYGLEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGAGVDKAFGRDIVDAHYKACL 180

Query: 677  YAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITELAGVVLSFDPKPIP 856
            YAGINISGINGEVMPGQWEFQVGPSVGIS+GDELW ARYILERITE+AGVVLSFDPKPI 
Sbjct: 181  YAGINISGINGEVMPGQWEFQVGPSVGISSGDELWAARYILERITEVAGVVLSFDPKPIQ 240

Query: 857  GDWNGAGAHTNYSTKTMREDGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1036
            GDWNGAGAHTNYSTK+MR +GG+ VIKKAIEKLGLRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMRNEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1037 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 1204
            I+TF WGVANRGAS+RVGRDTEK+GKGYFEDRRPASNMDPYVVTSMIAETTILWKP
Sbjct: 301  INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356


>gb|ACJ11724.1| glutamine synthase [Gossypium hirsutum]
          Length = 356

 Score =  651 bits (1679), Expect = 0.0
 Identities = 306/356 (85%), Positives = 328/356 (92%)
 Frame = +2

Query: 137  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSKLPKWNYDGSST 316
            MSL+ DLINLNL+D+T+KIIAEYIWIGGSGMD+RSK RTLPGPVTDPSKLPKWNYDGSST
Sbjct: 1    MSLLNDLINLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSST 60

Query: 317  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 496
             QAPG DSEVILYPQAIFKDPFR+GNNILV+CD YTPAGEPIPTNKRFNAAKIFSHPDVV
Sbjct: 61   NQAPGDDSEVILYPQAIFKDPFRKGNNILVMCDAYTPAGEPIPTNKRFNAAKIFSHPDVV 120

Query: 497  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 676
            AE PWYG+EQEYTLLQKD                  YYC  GADK+FGRDIVD+HYKACL
Sbjct: 121  AEEPWYGIEQEYTLLQKDTKWPLGWPVGGFPGPQGPYYCGVGADKSFGRDIVDSHYKACL 180

Query: 677  YAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITELAGVVLSFDPKPIP 856
            YAG+NISGINGEVMPGQWEFQVGPSVGISAGD++W+ARYILERITE+AGVVLSFDPKPIP
Sbjct: 181  YAGVNISGINGEVMPGQWEFQVGPSVGISAGDQIWIARYILERITEIAGVVLSFDPKPIP 240

Query: 857  GDWNGAGAHTNYSTKTMREDGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1036
            GDWNGAGAHTNYSTK+MR DGG NVIKKAIEKLGLRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMRNDGGINVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1037 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 1204
            I++FSWGVANRGAS+RVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTI+WKP
Sbjct: 301  INSFSWGVANRGASIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTIIWKP 356


>ref|XP_004145846.1| PREDICTED: glutamine synthetase cytosolic isozyme-like [Cucumis
            sativus] gi|449516009|ref|XP_004165040.1| PREDICTED:
            glutamine synthetase cytosolic isozyme-like [Cucumis
            sativus] gi|374676432|gb|AEZ56958.1| glutamine synthetase
            [Cucumis sativus]
          Length = 356

 Score =  649 bits (1675), Expect = 0.0
 Identities = 308/356 (86%), Positives = 328/356 (92%)
 Frame = +2

Query: 137  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSKLPKWNYDGSST 316
            MSL++DL+NLNL+DST+KIIAEYIWIGGSGMD+RSK RTL GPV+DPSKLPKWNYDGSST
Sbjct: 1    MSLLSDLVNLNLSDSTEKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSKLPKWNYDGSST 60

Query: 317  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 496
            GQAPG DSEVILYPQAIF+DPFRRGNNILV+CDTYTPAGEPIPTNKR  AAKIFSHPDVV
Sbjct: 61   GQAPGEDSEVILYPQAIFRDPFRRGNNILVVCDTYTPAGEPIPTNKRHAAAKIFSHPDVV 120

Query: 497  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 676
            AEVPWYG+EQEYTLLQKDV                 YYC  G DKAFGRDIVDAHYKACL
Sbjct: 121  AEVPWYGIEQEYTLLQKDVKWPIGWPIGGFPGPQGPYYCGVGVDKAFGRDIVDAHYKACL 180

Query: 677  YAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITELAGVVLSFDPKPIP 856
            YAG+NISGINGEVMPGQWEFQVGPSVGISAGDE+WVARYILERITE+AGVVLSFDPKPI 
Sbjct: 181  YAGVNISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEIAGVVLSFDPKPIQ 240

Query: 857  GDWNGAGAHTNYSTKTMREDGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1036
            GDWNGAGAHTNYSTK+MRE+GG+ VIKKAIEKL LRH+EHI+AYGEGNERRLTGRHETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMREEGGYEVIKKAIEKLKLRHKEHIAAYGEGNERRLTGRHETAD 300

Query: 1037 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 1204
            IHTFSWGVANRGASVRVGRDTEK+GKGYFEDRRPASNMDPYVVTSM+AETTILWKP
Sbjct: 301  IHTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMVAETTILWKP 356


>ref|XP_003619869.1| Glutamine synthetase [Medicago truncatula] gi|1835154|emb|CAA71316.1|
            glutamine synthetase [Medicago truncatula]
            gi|355494884|gb|AES76087.1| Glutamine synthetase
            [Medicago truncatula]
          Length = 356

 Score =  647 bits (1670), Expect = 0.0
 Identities = 303/356 (85%), Positives = 330/356 (92%)
 Frame = +2

Query: 137  MSLITDLINLNLTDSTKKIIAEYIWIGGSGMDVRSKGRTLPGPVTDPSKLPKWNYDGSST 316
            MSL++DLINLNL++S++KIIAEYIW+GGSGMD+RSK RTLPGPV+DPSKLPKWNYDGSST
Sbjct: 1    MSLLSDLINLNLSESSEKIIAEYIWVGGSGMDLRSKARTLPGPVSDPSKLPKWNYDGSST 60

Query: 317  GQAPGTDSEVILYPQAIFKDPFRRGNNILVICDTYTPAGEPIPTNKRFNAAKIFSHPDVV 496
             QAPG DSEVILYPQAIFKDPFR+GNNILVICD YTPAGEP+PTNKR+NAAKIFSHPDV 
Sbjct: 61   NQAPGQDSEVILYPQAIFKDPFRQGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVA 120

Query: 497  AEVPWYGLEQEYTLLQKDVNXXXXXXXXXXXXXXXXYYCSAGADKAFGRDIVDAHYKACL 676
            AEVPWYG+EQEYTLLQKD N                YYC  GADKA+GRDIVDAHYKACL
Sbjct: 121  AEVPWYGIEQEYTLLQKDTNWPLGWPIGGYPGPQGPYYCGIGADKAYGRDIVDAHYKACL 180

Query: 677  YAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITELAGVVLSFDPKPIP 856
            YAGINISGINGEVMPGQWEFQVGPSVGISAGDE+W ARYILERITE+AGVV+SFDPKPIP
Sbjct: 181  YAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIP 240

Query: 857  GDWNGAGAHTNYSTKTMREDGGFNVIKKAIEKLGLRHEEHISAYGEGNERRLTGRHETAD 1036
            GDWNGAGAHTNYSTK+MRE+GG+ +IKKAIEKLGLRH+EHI+AYGEGNERRLTG+HETAD
Sbjct: 241  GDWNGAGAHTNYSTKSMRENGGYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETAD 300

Query: 1037 IHTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 1204
            I+TFSWGVANRGASVRVGRDTEKDGKGYFEDRRP+SNMDPYVVTSMIAETT+LWKP
Sbjct: 301  INTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPSSNMDPYVVTSMIAETTLLWKP 356


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