BLASTX nr result

ID: Coptis23_contig00001789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001789
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522687.1| GATA transcription factor, putative [Ricinus...   244   4e-62
gb|AEW69783.1| Hop-interacting protein THI008 [Solanum lycopersi...   243   6e-62
emb|CBI38230.3| unnamed protein product [Vitis vinifera]              243   9e-62
ref|XP_002270361.1| PREDICTED: GATA transcription factor 24 [Vit...   243   9e-62
ref|XP_004159006.1| PREDICTED: GATA transcription factor 24-like...   234   3e-59

>ref|XP_002522687.1| GATA transcription factor, putative [Ricinus communis]
           gi|223538163|gb|EEF39774.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 311

 Score =  244 bits (622), Expect = 4e-62
 Identities = 131/211 (62%), Positives = 155/211 (73%), Gaps = 9/211 (4%)
 Frame = -2

Query: 911 GENTDQLTLSFHGQVYVFDSVSAEKVQAVLLLLGGYEIPNAM--SEVTIQNARNPNDMPG 738
           G ++DQLTLSF G+VYVFD+VS +KVQAVLLLLGGYEIP+ +  +E    N R   D+ G
Sbjct: 82  GGSSDQLTLSFQGEVYVFDAVSPDKVQAVLLLLGGYEIPSGIPTTETVSLNQRGYTDLSG 141

Query: 737 RLSLPQRAASLHRFREKRKDRCFDKKIRYAVRKEVALRMQRKKGQFTSSKPTPEELAS-- 564
           R + P RAASL RFREKRK+RCFDKKIRY VRKEVALRMQRKKGQFTSSK + +E+ S  
Sbjct: 142 RSTQPHRAASLRRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFTSSKNSSDEMGSGS 201

Query: 563 ---RGIENGGDDSP--EILCTHCGISSKSTPMMRRGPAGPRTLCNACGLMWANKGTLKDL 399
               G +  G D    E  CTHCGISSKSTPMMRRGPAGPRTLCNACGL WANKG L+DL
Sbjct: 202 SLWSGPQGSGQDESLMETSCTHCGISSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDL 261

Query: 398 SKAIAAVTQSPVSHIKQVVPDEKAEANSSQI 306
           SK  +A  Q P +   + +   + EAN++ +
Sbjct: 262 SKMPSAGIQGPPA---KPMEQGEGEANNTAV 289


>gb|AEW69783.1| Hop-interacting protein THI008 [Solanum lycopersicum]
          Length = 317

 Score =  243 bits (621), Expect = 6e-62
 Identities = 134/231 (58%), Positives = 164/231 (70%), Gaps = 6/231 (2%)
 Frame = -2

Query: 959 PSDSAF-PGSNSSLSIRGENTDQLTLSFHGQVYVFDSVSAEKVQAVLLLLGGYEIPNAMS 783
           P +S + PGS     + G ++DQLTLSF G+V+V+D+VS EKVQAVLLLLGGYE+P  + 
Sbjct: 82  PHNSLYVPGSEM---VGGGSSDQLTLSFRGEVFVYDAVSPEKVQAVLLLLGGYEVPAGIP 138

Query: 782 EVTI--QNARNPNDMPGRLSLPQRAASLHRFREKRKDRCFDKKIRYAVRKEVALRMQRKK 609
            V +  Q+ R  ++ PGRL+ PQRAASL RFREKRK+RCFDKKIRY VRKEVALRMQRKK
Sbjct: 139 TVNMASQSHRASSEGPGRLNQPQRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQRKK 198

Query: 608 GQFTSSKPTPEELASRGIE-NGG--DDSPEILCTHCGISSKSTPMMRRGPAGPRTLCNAC 438
           GQFTSSK   +E AS   E N G   +  E LC HCG SSKSTPMMRRGPAGPR+LCNAC
Sbjct: 199 GQFTSSKTVSDEAASSSAEGNAGSSQEEQETLCRHCGTSSKSTPMMRRGPAGPRSLCNAC 258

Query: 437 GLMWANKGTLKDLSKAIAAVTQSPVSHIKQVVPDEKAEANSSQIRDAEQVL 285
           GL WANKG L+DLSK    V+ +    +     ++  EA+ S +  A  ++
Sbjct: 259 GLTWANKGILRDLSK----VSTTGAQELSVKSSEQNGEADGSDVMAAAGII 305


>emb|CBI38230.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  243 bits (619), Expect = 9e-62
 Identities = 124/189 (65%), Positives = 140/189 (74%), Gaps = 8/189 (4%)
 Frame = -2

Query: 911 GENTDQLTLSFHGQVYVFDSVSAEKVQAVLLLLGGYEIPNAMSE--VTIQNARNPNDMPG 738
           G   DQLTLSF G+VYVFD+VS EKVQAVLLLLGGYE+P  +    +   N R   D  G
Sbjct: 29  GGGVDQLTLSFQGEVYVFDAVSPEKVQAVLLLLGGYEVPTGIPAPGMVPPNQRGLADFTG 88

Query: 737 RLSLPQRAASLHRFREKRKDRCFDKKIRYAVRKEVALRMQRKKGQFTSSKPTPEELAS-- 564
           R S PQRAASL RFREKRK+RCFDKKIRY VRKEVALRMQRKKGQFTSSK + +E+    
Sbjct: 89  RSSQPQRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFTSSKASSDEVGGGA 148

Query: 563 ----RGIENGGDDSPEILCTHCGISSKSTPMMRRGPAGPRTLCNACGLMWANKGTLKDLS 396
                     G D PEILCTHCG SSK+TPMMRRGPAGPR+LCNACGL WANKG L+DLS
Sbjct: 149 SSDWNAAHGSGQDEPEILCTHCGTSSKTTPMMRRGPAGPRSLCNACGLKWANKGVLRDLS 208

Query: 395 KAIAAVTQS 369
           +  + V ++
Sbjct: 209 RVSSGVQET 217


>ref|XP_002270361.1| PREDICTED: GATA transcription factor 24 [Vitis vinifera]
          Length = 302

 Score =  243 bits (619), Expect = 9e-62
 Identities = 124/189 (65%), Positives = 140/189 (74%), Gaps = 8/189 (4%)
 Frame = -2

Query: 911 GENTDQLTLSFHGQVYVFDSVSAEKVQAVLLLLGGYEIPNAMSE--VTIQNARNPNDMPG 738
           G   DQLTLSF G+VYVFD+VS EKVQAVLLLLGGYE+P  +    +   N R   D  G
Sbjct: 77  GGGVDQLTLSFQGEVYVFDAVSPEKVQAVLLLLGGYEVPTGIPAPGMVPPNQRGLADFTG 136

Query: 737 RLSLPQRAASLHRFREKRKDRCFDKKIRYAVRKEVALRMQRKKGQFTSSKPTPEELAS-- 564
           R S PQRAASL RFREKRK+RCFDKKIRY VRKEVALRMQRKKGQFTSSK + +E+    
Sbjct: 137 RSSQPQRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFTSSKASSDEVGGGA 196

Query: 563 ----RGIENGGDDSPEILCTHCGISSKSTPMMRRGPAGPRTLCNACGLMWANKGTLKDLS 396
                     G D PEILCTHCG SSK+TPMMRRGPAGPR+LCNACGL WANKG L+DLS
Sbjct: 197 SSDWNAAHGSGQDEPEILCTHCGTSSKTTPMMRRGPAGPRSLCNACGLKWANKGVLRDLS 256

Query: 395 KAIAAVTQS 369
           +  + V ++
Sbjct: 257 RVSSGVQET 265


>ref|XP_004159006.1| PREDICTED: GATA transcription factor 24-like [Cucumis sativus]
          Length = 303

 Score =  234 bits (597), Expect = 3e-59
 Identities = 128/197 (64%), Positives = 139/197 (70%), Gaps = 24/197 (12%)
 Frame = -2

Query: 911 GENTDQLTLSFHGQVYVFDSVSAEKVQAVLLLLGGYEIPNAMSEVTIQNARNPND----- 747
           GEN DQLTLS+ GQVYVFDSVS EKVQAVLLLLGG E+P  +  + I N   PND     
Sbjct: 79  GENCDQLTLSYQGQVYVFDSVSPEKVQAVLLLLGGREVPLRVPSIPITN--QPNDRHLTD 136

Query: 746 ---------MPGRLSLPQRAASLHRFREKRKDRCFDKKIRYAVRKEVALRMQRKKGQFTS 594
                    +P RLS+PQR ASL RFREKRK+R FDKKIRY VRKEVALRMQR KGQFTS
Sbjct: 137 EAFNQALANIPPRLSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTS 196

Query: 593 SKPTPEELA----------SRGIENGGDDSPEILCTHCGISSKSTPMMRRGPAGPRTLCN 444
           SKP  E+ +          S   +  G    EILC HCGIS KSTPMMRRGP GPRTLCN
Sbjct: 197 SKPIHEDSSLAMASWEQNESWSSDGNGSQQQEILCRHCGISEKSTPMMRRGPDGPRTLCN 256

Query: 443 ACGLMWANKGTLKDLSK 393
           ACGLMWANKGTL+DLSK
Sbjct: 257 ACGLMWANKGTLRDLSK 273


Top