BLASTX nr result
ID: Coptis23_contig00001773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001773
(1944 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-lik... 827 0.0
ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago t... 820 0.0
sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplasti... 818 0.0
ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus c... 801 0.0
ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chlorop... 798 0.0
>ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera]
gi|296082166|emb|CBI21171.3| unnamed protein product
[Vitis vinifera]
Length = 544
Score = 827 bits (2136), Expect = 0.0
Identities = 402/565 (71%), Positives = 456/565 (80%), Gaps = 1/565 (0%)
Frame = +1
Query: 118 MALLQPFISDPSHLKTLLPF-TPLALNHTNSTRRRTNANELFISSPTILGLKVKLKQVRT 294
MALLQPF+S L LP TPL+L +S L KL
Sbjct: 1 MALLQPFLSHSPPLSFSLPKPTPLSL----------------VSLSQSLKPPHKLLTQTW 44
Query: 295 RVSHQCSAVAQEFGGEVLTDEEKGEDYDVLLESNVDEKEKVENETVEYDWREEWYPLYLT 474
R S +C A+A+ G L GED VL++ + E+ + E EYDW+EEWYPLYLT
Sbjct: 45 RDSIRCCAIAEIRDGVSLG----GEDQGVLVDPSSQEEVRGERHVAEYDWKEEWYPLYLT 100
Query: 475 QNLPDDAPLGLTVYDKQIVLYRDGNGDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQ 654
+++P+DAP+GLTV+DKQ+VLYRDG QCY+DRCPHRLAKLSEGQLVDGRLECLYHGWQ
Sbjct: 101 KDIPEDAPMGLTVFDKQLVLYRDGKDLLQCYEDRCPHRLAKLSEGQLVDGRLECLYHGWQ 160
Query: 655 FEGKGKCVKIPQLPSGAKIPRNACVKTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFAR 834
FEG+GKCVKIPQLP+ AKIPR+ACVKTYEV+DSQGV+WVWMS + PPNP+KLPWFENFAR
Sbjct: 161 FEGEGKCVKIPQLPADAKIPRSACVKTYEVKDSQGVVWVWMSHRTPPNPDKLPWFENFAR 220
Query: 835 TGFQDISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALLFKVVERSNRGF 1014
GF+D ST HELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQ L FKV ER++RGF
Sbjct: 221 PGFRDTSTIHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQPLCFKVTERTDRGF 280
Query: 1015 AGLWGREKDQTMPNYLRFDAPCVLQNNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRF 1194
AG WGREKD+++ N+LRF+APCVLQNNREIVDKNGEKHY +GLFLCRPSGQGKSMLIVRF
Sbjct: 281 AGWWGREKDESLLNFLRFEAPCVLQNNREIVDKNGEKHYFTGLFLCRPSGQGKSMLIVRF 340
Query: 1195 GGTRRSSPLAKLFPMWYFHQNAGKVFEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTW 1374
G T+R SP+AKLFP WYFHQNAGKVFEQDMGFLSSQNEIL+KEK+PTKELY+NLRSSDTW
Sbjct: 341 GSTKR-SPIAKLFPEWYFHQNAGKVFEQDMGFLSSQNEILMKEKVPTKELYLNLRSSDTW 399
Query: 1375 VAEYRKWMDKVGHGMPYHFGHSTISLPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAP 1554
VAEYR+WMDKVGHGMPYHFGHSTISLP +PAVVEHAPAGLVAG+SAS PAKGGIGTMHAP
Sbjct: 400 VAEYRRWMDKVGHGMPYHFGHSTISLPQQPAVVEHAPAGLVAGLSASSPAKGGIGTMHAP 459
Query: 1555 NLANRYFRHVIHCKECSNVVKAFQTWKNXXXXXXXXXXXXXXXXXXRQWKTLLVVSSALC 1734
N ANRYFRHV+HCK C +VVKAFQ WKN RQWK LL+V +AL
Sbjct: 460 NPANRYFRHVVHCKGCRSVVKAFQAWKNVFFTLALASTALAILVTGRQWKALLLVGTALS 519
Query: 1735 LAGVYACSSAIALNTTNFIRVHRRL 1809
LAG+YACS+ +A+NTTNF+R+HRRL
Sbjct: 520 LAGMYACSTVVAMNTTNFVRIHRRL 544
>ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein
Tic55 [Medicago truncatula]
Length = 552
Score = 820 bits (2117), Expect = 0.0
Identities = 397/567 (70%), Positives = 450/567 (79%), Gaps = 3/567 (0%)
Frame = +1
Query: 118 MALLQPFISDPSHLKTLLPFTPLALNHTNSTRRRTNANELFISSPTI---LGLKVKLKQV 288
MAL+ PF+ P+ LP +P + L +SP+ L L
Sbjct: 1 MALVNPFLL-PTKTHFALPVSP-----------PPSKQILLWTSPSSSFSFNLNKGLSSS 48
Query: 289 RTRVSHQCSAVAQEFGGEVLTDEEKGEDYDVLLESNVDEKEKVENETVEYDWREEWYPLY 468
R + + A A L D E ED VL+ + +++ + E E YDW+EEWYPLY
Sbjct: 49 RRKHAGYLPATADVKTASTLLDVE--EDQKVLVGPSSEQERRGERELAAYDWKEEWYPLY 106
Query: 469 LTQNLPDDAPLGLTVYDKQIVLYRDGNGDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHG 648
LT+N+PDDAPLGLTV+DK +VL++DGN FQCY+DRCPHRLAKLSEGQL+DGRLECLYHG
Sbjct: 107 LTKNVPDDAPLGLTVFDKNLVLFKDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHG 166
Query: 649 WQFEGKGKCVKIPQLPSGAKIPRNACVKTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENF 828
WQFEG+GKCVKIPQLP+ AKIPR+ACVKTYEVRDSQGVIWVWMS K PPN K+PWFENF
Sbjct: 167 WQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVIWVWMSPKVPPNVSKIPWFENF 226
Query: 829 ARTGFQDISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALLFKVVERSNR 1008
AR GFQD+STTHELPYDHSILLENLMDPAH+PISHDRTDW+AKREDAQ LLF+V ER++R
Sbjct: 227 ARPGFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLLFEVTERTDR 286
Query: 1009 GFAGLWGREKDQTMPNYLRFDAPCVLQNNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIV 1188
GFAG WGREKD T PN+LRF+APCVLQNNREIVDKNGE +Y SGLFLCRP+GQGKSMLIV
Sbjct: 287 GFAGWWGREKDGTKPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIV 346
Query: 1189 RFGGTRRSSPLAKLFPMWYFHQNAGKVFEQDMGFLSSQNEILVKEKLPTKELYINLRSSD 1368
RFGGT+R SP+ KLFP WYFHQNA KVFEQDMGFLSSQNEIL+KEK+PTKELY+NL+SSD
Sbjct: 347 RFGGTKR-SPIVKLFPQWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSD 405
Query: 1369 TWVAEYRKWMDKVGHGMPYHFGHSTISLPTEPAVVEHAPAGLVAGISASLPAKGGIGTMH 1548
TWVAEYRKWMDKVGHGMPYHFGH+TISLP EPAV+EHAPAGL+AG+SAS PAKGGIGTMH
Sbjct: 406 TWVAEYRKWMDKVGHGMPYHFGHNTISLPKEPAVIEHAPAGLIAGLSASSPAKGGIGTMH 465
Query: 1549 APNLANRYFRHVIHCKECSNVVKAFQTWKNXXXXXXXXXXXXXXXXXXRQWKTLLVVSSA 1728
APNLANRYFRHVIHCK C VKAFQTWKN RQWK +L+ S+A
Sbjct: 466 APNLANRYFRHVIHCKGCRTAVKAFQTWKNALSAVVVALAALAILVTGRQWKAILLASAA 525
Query: 1729 LCLAGVYACSSAIALNTTNFIRVHRRL 1809
LC GVYACS+A+ALNTTNFIR HRRL
Sbjct: 526 LCSVGVYACSTAVALNTTNFIRTHRRL 552
>sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske
iron-sulfur protein TIC55; AltName: Full=Translocon at
the inner envelope membrane of chloroplasts 55;
Short=PsTIC55; Flags: Precursor
gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein
Tic55 [Pisum sativum]
Length = 553
Score = 818 bits (2114), Expect = 0.0
Identities = 400/560 (71%), Positives = 444/560 (79%), Gaps = 3/560 (0%)
Frame = +1
Query: 139 ISDPSHLKTLL---PFTPLALNHTNSTRRRTNANELFISSPTILGLKVKLKQVRTRVSHQ 309
+S P KTLL P + + N S+RRR A
Sbjct: 23 VSPPPSKKTLLCTNPSSNFSFNKALSSRRRKQA--------------------------W 56
Query: 310 CSAVAQEFGGEVLTDEEKGEDYDVLLESNVDEKEKVENETVEYDWREEWYPLYLTQNLPD 489
C A A + L D E ED VL+ + +++ K E E +YDW EEWYPLYLT+N+P
Sbjct: 57 CVAAAADVKDATLLDGE--EDQKVLVGPSSEQERKGEREVADYDWTEEWYPLYLTKNVPH 114
Query: 490 DAPLGLTVYDKQIVLYRDGNGDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGKG 669
DAPLGL VYDK IVL+RDGN FQCY+DRCPHRLAKLSEGQL+DGRLECLYHGWQFEG+G
Sbjct: 115 DAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 174
Query: 670 KCVKIPQLPSGAKIPRNACVKTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFARTGFQD 849
KCVKIPQLP+ AKIP++ACVKTYEVRDSQGV+WVWMS K PPN K+PWFENFAR GFQD
Sbjct: 175 KCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSRKTPPNVSKIPWFENFARPGFQD 234
Query: 850 ISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALLFKVVERSNRGFAGLWG 1029
ISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQAL F+V ER++RGFAG WG
Sbjct: 235 ISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALGFEVTERTDRGFAGWWG 294
Query: 1030 REKDQTMPNYLRFDAPCVLQNNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRFGGTRR 1209
REKD + PN+LRF+APCVLQNNREIVDKNGE ++ SGLFLCRP+GQGKSMLIVRFG T+R
Sbjct: 295 REKDGSKPNFLRFEAPCVLQNNREIVDKNGEINHFSGLFLCRPTGQGKSMLIVRFGATKR 354
Query: 1210 SSPLAKLFPMWYFHQNAGKVFEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTWVAEYR 1389
SPL KLFP WYFHQNA KVFEQDMGFLSSQNEIL+KEK+PTKELY+NL+SSDTWVAEYR
Sbjct: 355 -SPLIKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYR 413
Query: 1390 KWMDKVGHGMPYHFGHSTISLPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAPNLANR 1569
KWMDKVGHGMPYHFGHSTISLP EPAVVEHAPAGLVAG+SAS PAKGGIGTMHAPNLANR
Sbjct: 414 KWMDKVGHGMPYHFGHSTISLPEEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANR 473
Query: 1570 YFRHVIHCKECSNVVKAFQTWKNXXXXXXXXXXXXXXXXXXRQWKTLLVVSSALCLAGVY 1749
YFRHVIHCK CS+ +KAFQ WKN RQWK LL+ S++LC GVY
Sbjct: 474 YFRHVIHCKGCSSAIKAFQIWKNVLSGVVVALAALAILVSGRQWKVLLLASASLCSVGVY 533
Query: 1750 ACSSAIALNTTNFIRVHRRL 1809
ACS+AIA+NTTNFIRVHRRL
Sbjct: 534 ACSTAIAMNTTNFIRVHRRL 553
>ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis]
gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase,
putative [Ricinus communis]
Length = 552
Score = 801 bits (2068), Expect = 0.0
Identities = 381/552 (69%), Positives = 448/552 (81%), Gaps = 5/552 (0%)
Frame = +1
Query: 169 LPFTPLALNHTNSTRRRTNANELFISS----PTILGLKVKLKQVRTRVSH-QCSAVAQEF 333
LPF L L+HT + + + L +S PTI +K ++ H +C A +
Sbjct: 3 LPFH-LFLSHTTAITKSFPLSPLSSTSKPTTPTIKTHLLKPILHTLKIRHTKCYAASSTV 61
Query: 334 GGEVLTDEEKGEDYDVLLESNVDEKEKVENETVEYDWREEWYPLYLTQNLPDDAPLGLTV 513
E + + +D+ VL+ + +E+ + E +YDW EEWYPLYLT+++PDDAPLGLTV
Sbjct: 62 HDESRSGVVEADDHMVLVGPSSEEERRGERVVADYDWTEEWYPLYLTKDVPDDAPLGLTV 121
Query: 514 YDKQIVLYRDGNGDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGKGKCVKIPQL 693
+DKQIVLY+DG G+ +CY+DRCPHRLAKLSEGQL+DGRLECLYHGWQFEG+GKCVKIPQL
Sbjct: 122 FDKQIVLYKDGEGELRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQL 181
Query: 694 PSGAKIPRNACVKTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFARTGFQDISTTHELP 873
P+ AKIP++ACVKTYE+R+SQGV+WVWMS K PPN KLPWFENFAR GFQD STTHELP
Sbjct: 182 PTNAKIPQSACVKTYEIRESQGVVWVWMSRKTPPNLNKLPWFENFARPGFQDTSTTHELP 241
Query: 874 YDHSILLENLMDPAHVPISHDRTDWSAKREDAQALLFKVVERSNRGFAGLWGREKDQTMP 1053
YDHSILLENLMDPAH+PISHDRTDWSAKREDAQAL FKV ER++RGFAG WGR+KD +
Sbjct: 242 YDHSILLENLMDPAHIPISHDRTDWSAKREDAQALRFKVTERTDRGFAGWWGRDKDPALL 301
Query: 1054 NYLRFDAPCVLQNNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRFGGTRRSSPLAKLF 1233
N+LRF+APCVLQNNR+IVD+NG KHY +GLFLCRP+GQGK+MLIVRFGGT+RS +AK
Sbjct: 302 NFLRFEAPCVLQNNRDIVDENGVKHYFTGLFLCRPTGQGKAMLIVRFGGTKRSH-IAKWI 360
Query: 1234 PMWYFHQNAGKVFEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTWVAEYRKWMDKVGH 1413
P WYFHQNA KVFEQDMGFLSSQNE+L+KEK+PTK LY+NL+SSDTWVAEYRKWMDKVGH
Sbjct: 361 PQWYFHQNASKVFEQDMGFLSSQNEVLMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVGH 420
Query: 1414 GMPYHFGHSTISLPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAPNLANRYFRHVIHC 1593
GMPYHFGHSTISLP PAVVEHAPAGLVAG+SAS PAKGGIGTMHAPNL+NRYFRHVIHC
Sbjct: 421 GMPYHFGHSTISLPEVPAVVEHAPAGLVAGVSASSPAKGGIGTMHAPNLSNRYFRHVIHC 480
Query: 1594 KECSNVVKAFQTWKNXXXXXXXXXXXXXXXXXXRQWKTLLVVSSALCLAGVYACSSAIAL 1773
++CS+VVK F+ WKN RQWK L++S+ LCLAGVYAC++AIA+
Sbjct: 481 RKCSSVVKGFEAWKNALSAIALVSTALAILASGRQWKPFLLLSAGLCLAGVYACTTAIAM 540
Query: 1774 NTTNFIRVHRRL 1809
NTTNFIR HRRL
Sbjct: 541 NTTNFIRTHRRL 552
>ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine max]
Length = 532
Score = 798 bits (2061), Expect = 0.0
Identities = 374/480 (77%), Positives = 414/480 (86%)
Frame = +1
Query: 370 DYDVLLESNVDEKEKVENETVEYDWREEWYPLYLTQNLPDDAPLGLTVYDKQIVLYRDGN 549
D+ VL+ +E+ K + YDW +EWYPLYLTQN+P+DAPLGL V+DKQ+VL++DGN
Sbjct: 59 DHAVLVGPTSEEERKGD-----YDWTQEWYPLYLTQNVPEDAPLGLRVFDKQLVLFKDGN 113
Query: 550 GDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGKGKCVKIPQLPSGAKIPRNACV 729
G F+CY+DRCPHRLAKLSEGQL+DGRLECLYHGWQFEG+GKCVKIPQLP+ AKIPR ACV
Sbjct: 114 GQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRAACV 173
Query: 730 KTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFARTGFQDISTTHELPYDHSILLENLMD 909
KTYEVRDSQGVIWVWMS K PPN KLPWFENFAR GFQD+ST HELPYDHSILLENLMD
Sbjct: 174 KTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPGFQDVSTIHELPYDHSILLENLMD 233
Query: 910 PAHVPISHDRTDWSAKREDAQALLFKVVERSNRGFAGLWGREKDQTMPNYLRFDAPCVLQ 1089
PAH+PISHDRTDW+AKREDAQ L F+V ER++RGFAG WGREKD +MPN+LRF+APCVLQ
Sbjct: 234 PAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQ 293
Query: 1090 NNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRFGGTRRSSPLAKLFPMWYFHQNAGKV 1269
NNREIVDKNGE +Y SGLFLCRP+GQGKSMLIVRFGGT+R SPLAK+FP WYFHQNA KV
Sbjct: 294 NNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKR-SPLAKVFPKWYFHQNASKV 352
Query: 1270 FEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 1449
FEQDMGFLSSQNEIL++EK+PTKELY+NL+SSDTWVAEYRKWMDK GHGMPYHFGHSTIS
Sbjct: 353 FEQDMGFLSSQNEILLREKVPTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTIS 412
Query: 1450 LPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAPNLANRYFRHVIHCKECSNVVKAFQT 1629
LP EPAVVEHAPAGLVAG SAS P KGGIGTMHAPN ANRYFRHVIHCK C VVKAF+
Sbjct: 413 LPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVKAFEA 472
Query: 1630 WKNXXXXXXXXXXXXXXXXXXRQWKTLLVVSSALCLAGVYACSSAIALNTTNFIRVHRRL 1809
WKN RQWK LL+ S+ALC GVYACS+AIA+NTTNFIR HRRL
Sbjct: 473 WKNALSAVAIALTALAILLSGRQWKVLLLASAALCSVGVYACSTAIAMNTTNFIRTHRRL 532